RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 CDK13Q14004 1512 aaKnown RBP18.17■□□□□ 0.5
ERCC8-208ENST00000497892 CASKIN1Q8WXD9 1431 aa18.15■□□□□ 0.5
ERCC8-208ENST00000497892 FYCO1Q9BQS8 1478 aa18.14■□□□□ 0.49
ERCC8-208ENST00000497892 ABCA9Q8IUA7 1624 aa18.13■□□□□ 0.49
ERCC8-208ENST00000497892 LOC105371045A0A1W2PR82 267 aa18.13■□□□□ 0.49
ERCC8-208ENST00000497892 CCDC18Q5T9S5 1454 aa18.09■□□□□ 0.49
ERCC8-208ENST00000497892 TEX14Q8IWB6 1497 aa18.09■□□□□ 0.49
ERCC8-208ENST00000497892 KCNH8Q96L42 1107 aa18.09■□□□□ 0.49
ERCC8-208ENST00000497892 MAGI3Q5TCQ9 1506 aa18.08■□□□□ 0.48
ERCC8-208ENST00000497892 ATP1B4Q9UN42 357 aaPredicted RBP18.07■□□□□ 0.48
ERCC8-208ENST00000497892 KDM6BO15054 1643 aa18.07■□□□□ 0.48
ERCC8-208ENST00000497892 CD109Q6YHK3 1445 aa18.06■□□□□ 0.48
ERCC8-208ENST00000497892 PLEKHD1A6NEE1 506 aa18.06■□□□□ 0.48
ERCC8-208ENST00000497892 TTC37Q6PGP7 1564 aa18.04■□□□□ 0.48
ERCC8-208ENST00000497892 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.03■□□□□ 0.48
ERCC8-208ENST00000497892 KIF14Q15058 1648 aa18.01■□□□□ 0.47
ERCC8-208ENST00000497892 TROQ12816 1431 aaPredicted RBP18.01■□□□□ 0.47
ERCC8-208ENST00000497892 CDK11AQ9UQ88 783 aaPredicted RBP18■□□□□ 0.47
ERCC8-208ENST00000497892 VPS8Q8N3P4 1428 aa17.98■□□□□ 0.47
ERCC8-208ENST00000497892 MYO5CQ9NQX4 1742 aa17.96■□□□□ 0.47
ERCC8-208ENST00000497892 ZBTB22O15209 634 aa17.96■□□□□ 0.47
ERCC8-208ENST00000497892 COL17A1Q9UMD9 1497 aaPredicted RBP17.95■□□□□ 0.46
ERCC8-208ENST00000497892 CFAP74Q9C0B2 1584 aa17.95■□□□□ 0.46
ERCC8-208ENST00000497892 NEO1Q92859 1461 aa17.95■□□□□ 0.46
ERCC8-208ENST00000497892 ARAP3Q8WWN8 1544 aa17.93■□□□□ 0.46
ERCC8-208ENST00000497892 PHLDB1Q86UU1 1377 aa17.91■□□□□ 0.46
ERCC8-208ENST00000497892 FANCAO15360 1455 aa17.91■□□□□ 0.46
ERCC8-208ENST00000497892 TIAM1Q13009 1591 aa17.9■□□□□ 0.46
ERCC8-208ENST00000497892 PLCH2O75038 1416 aa17.89■□□□□ 0.46
ERCC8-208ENST00000497892 EHBP1L1Q8N3D4 1523 aa17.89■□□□□ 0.45
ERCC8-208ENST00000497892 PREX2Q70Z35 1606 aa17.89■□□□□ 0.45
ERCC8-208ENST00000497892 POLA2Q14181 598 aa17.88■□□□□ 0.45
ERCC8-208ENST00000497892 CDC42BPAQ5VT25 1732 aa17.86■□□□□ 0.45
ERCC8-208ENST00000497892 ATF5Q9Y2D1 282 aaPredicted RBP17.86■□□□□ 0.45
ERCC8-208ENST00000497892 CDC42BPBQ9Y5S2 1711 aa17.86■□□□□ 0.45
ERCC8-208ENST00000497892 MAP3K1Q13233 1512 aa17.85■□□□□ 0.45
ERCC8-208ENST00000497892 MTUS2Q5JR59 1369 aa17.85■□□□□ 0.45
ERCC8-208ENST00000497892 FRMPD1Q5SYB0 1578 aa17.85■□□□□ 0.45
ERCC8-208ENST00000497892 ARHGAP5Q13017 1502 aa17.84■□□□□ 0.45
ERCC8-208ENST00000497892 AKNAQ7Z591 1439 aa17.84■□□□□ 0.45
ERCC8-208ENST00000497892 RICTORQ6R327 1708 aa17.84■□□□□ 0.45
ERCC8-208ENST00000497892 ADGRL1O94910 1474 aa17.81■□□□□ 0.44
ERCC8-208ENST00000497892 SUPT6HQ7KZ85 1726 aaKnown RBP17.8■□□□□ 0.44
ERCC8-208ENST00000497892 DENND4BO75064 1496 aaPredicted RBP17.79■□□□□ 0.44
ERCC8-208ENST00000497892 LRRC9Q6ZRR7 1453 aa17.79■□□□□ 0.44
ERCC8-208ENST00000497892 ITSN2Q9NZM3 1697 aa17.79■□□□□ 0.44
ERCC8-208ENST00000497892 GPATCH8Q9UKJ3 1502 aaKnown RBP17.78■□□□□ 0.44
ERCC8-208ENST00000497892 EFCAB2Q5VUJ9 269 aa17.78■□□□□ 0.44
ERCC8-208ENST00000497892 ZMYM4Q5VZL5 1548 aa17.77■□□□□ 0.44
ERCC8-208ENST00000497892 ABCC1P33527 1531 aa17.77■□□□□ 0.43
ERCC8-208ENST00000497892 POGZQ7Z3K3 1410 aa17.76■□□□□ 0.43
ERCC8-208ENST00000497892 NCOA2Q15596 1464 aa17.75■□□□□ 0.43
ERCC8-208ENST00000497892 SCAPERQ9BY12 1400 aa17.75■□□□□ 0.43
ERCC8-208ENST00000497892 RAPGEF3O95398 923 aa17.75■□□□□ 0.43
ERCC8-208ENST00000497892 SAMD9LQ8IVG5 1584 aa17.74■□□□□ 0.43
ERCC8-208ENST00000497892 CCNB3Q8WWL7 1395 aa17.74■□□□□ 0.43
ERCC8-208ENST00000497892 ARHGEF40Q8TER5 1519 aa17.73■□□□□ 0.43
ERCC8-208ENST00000497892 KDM5CP41229 1560 aa17.72■□□□□ 0.43
ERCC8-208ENST00000497892 ZNF518AQ6AHZ1 1483 aa17.71■□□□□ 0.43
ERCC8-208ENST00000497892 ARHGEF12Q9NZN5 1544 aa17.69■□□□□ 0.42
ERCC8-208ENST00000497892 MAGI2Q86UL8 1455 aa17.69■□□□□ 0.42
ERCC8-208ENST00000497892 ZFYVE16Q7Z3T8 1539 aa17.68■□□□□ 0.42
ERCC8-208ENST00000497892 SYCP2Q9BX26 1530 aa17.68■□□□□ 0.42
ERCC8-208ENST00000497892 KANK4Q5T7N3 995 aaPredicted RBP17.68■□□□□ 0.42
ERCC8-208ENST00000497892 HECW2Q9P2P5 1572 aa17.67■□□□□ 0.42
ERCC8-208ENST00000497892 CFDP1Q9UEE9 299 aaPredicted RBP17.67■□□□□ 0.42
ERCC8-208ENST00000497892 PLEKHH2Q8IVE3 1493 aa17.67■□□□□ 0.42
ERCC8-208ENST00000497892 KIAA1107Q9UPP5 1409 aa17.65■□□□□ 0.42
ERCC8-208ENST00000497892 RBM42Q9BTD8 480 aaKnown RBP17.65■□□□□ 0.42
ERCC8-208ENST00000497892 TRAPPC8Q9Y2L5 1435 aa17.64■□□□□ 0.42
ERCC8-208ENST00000497892 YEATS2Q9ULM3 1422 aa17.64■□□□□ 0.41
ERCC8-208ENST00000497892 ZNF777Q9ULD5 760 aaPredicted RBP17.63■□□□□ 0.41
ERCC8-208ENST00000497892 ATXN8OSP0DMR3 200 aa17.62■□□□□ 0.41
ERCC8-208ENST00000497892 CAMSAP2Q08AD1 1489 aa17.62■□□□□ 0.41
ERCC8-208ENST00000497892 MLH3Q9UHC1 1453 aa17.62■□□□□ 0.41
ERCC8-208ENST00000497892 MYOM3Q5VTT5 1437 aa17.61■□□□□ 0.41
ERCC8-208ENST00000497892 AFAP1Q8N556 730 aa17.6■□□□□ 0.41
ERCC8-208ENST00000497892 DIP2CQ9Y2E4 1556 aa17.6■□□□□ 0.41
ERCC8-208ENST00000497892 ABCA6Q8N139 1617 aa17.6■□□□□ 0.41
ERCC8-208ENST00000497892 SIGLEC1Q9BZZ2 1709 aa17.6■□□□□ 0.41
ERCC8-208ENST00000497892 KIDINS220Q9ULH0 1771 aa17.6■□□□□ 0.41
ERCC8-208ENST00000497892 INO80Q9ULG1 1556 aaPredicted RBP17.59■□□□□ 0.41
ERCC8-208ENST00000497892 MBD5Q9P267 1494 aa17.59■□□□□ 0.41
ERCC8-208ENST00000497892 MIA2Q96PC5 1412 aa17.58■□□□□ 0.41
ERCC8-208ENST00000497892 ZNF644Q9H582 1327 aaPredicted RBP17.58■□□□□ 0.4
ERCC8-208ENST00000497892 REREQ9P2R6 1566 aa17.57■□□□□ 0.4
ERCC8-208ENST00000497892 KDM4FA0A1W2PPD8 638 aa17.56■□□□□ 0.4
ERCC8-208ENST00000497892 HNRNPMP52272 730 aaKnown RBP eCLIP17.56■□□□□ 0.4
ERCC8-208ENST00000497892 ZBTB12Q9Y330 459 aaPredicted RBP17.56■□□□□ 0.4
ERCC8-208ENST00000497892 ARHGEF5Q12774 1597 aa17.56■□□□□ 0.4
ERCC8-208ENST00000497892 ATP7AQ04656 1500 aa17.56■□□□□ 0.4
ERCC8-208ENST00000497892 ATP10AO60312 1499 aa17.56■□□□□ 0.4
ERCC8-208ENST00000497892 C9orf84Q5VXU9 1444 aa17.55■□□□□ 0.4
ERCC8-208ENST00000497892 BCORL1Q5H9F3 1711 aa17.55■□□□□ 0.4
ERCC8-208ENST00000497892 CCDC141Q6ZP82 1450 aa17.54■□□□□ 0.4
ERCC8-208ENST00000497892 ADAMTSL3P82987 1691 aa17.53■□□□□ 0.4
ERCC8-208ENST00000497892 POTEHQ6S545 545 aa17.53■□□□□ 0.4
ERCC8-208ENST00000497892 PTPN23Q9H3S7 1636 aa17.52■□□□□ 0.4
ERCC8-208ENST00000497892 SPAG9O60271 1321 aaKnown RBP17.51■□□□□ 0.39
ERCC8-208ENST00000497892 FGD6Q6ZV73 1430 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms