RNA–Protein interactions for RNA: ENST00000497822.5

C1orf61-223, Transcript of chromosome 1 open reading frame 61, human

TSL 2

Gene C1orf61, Length 542 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C1orf61-223	ENST00000497822	POGZ	Q7Z3K3	1410 aa		31.5	■■■□□ 2.63
C1orf61-223	ENST00000497822	ZFYVE16	Q7Z3T8	1539 aa		31.5	■■■□□ 2.63
C1orf61-223	ENST00000497822	SIGLEC1	Q9BZZ2	1709 aa		31.5	■■■□□ 2.63
C1orf61-223	ENST00000497822	MYO5C	Q9NQX4	1742 aa		31.48	■■■□□ 2.63
C1orf61-223	ENST00000497822	ILDR1	Q86SU0	546 aa	Predicted RBP	31.47	■■■□□ 2.63
C1orf61-223	ENST00000497822	CASKIN1	Q8WXD9	1431 aa		31.47	■■■□□ 2.63
C1orf61-223	ENST00000497822	PCF11	O94913	1555 aa	Known RBP	31.47	■■■□□ 2.63
C1orf61-223	ENST00000497822	MAGI2	Q86UL8	1455 aa		31.44	■■■□□ 2.62
C1orf61-223	ENST00000497822	CLIP1	P30622	1438 aa		31.43	■■■□□ 2.62
C1orf61-223	ENST00000497822	MLEC	Q14165	292 aa		31.43	■■■□□ 2.62
C1orf61-223	ENST00000497822	PLPPR3	Q6T4P5	718 aa		31.43	■■■□□ 2.62
C1orf61-223	ENST00000497822	ARHGAP5	Q13017	1502 aa		31.42	■■■□□ 2.62
C1orf61-223	ENST00000497822	AFAP1	Q8N556	730 aa		31.41	■■■□□ 2.62
C1orf61-223	ENST00000497822	RIMS1	Q86UR5	1692 aa	Known RBP	31.41	■■■□□ 2.62
C1orf61-223	ENST00000497822	CCDC18	Q5T9S5	1454 aa		31.35	■■■□□ 2.61
C1orf61-223	ENST00000497822	ATP10A	O60312	1499 aa		31.34	■■■□□ 2.61
C1orf61-223	ENST00000497822	CDC42BPB	Q9Y5S2	1711 aa		31.33	■■■□□ 2.61
C1orf61-223	ENST00000497822	FYCO1	Q9BQS8	1478 aa		31.3	■■■□□ 2.6
C1orf61-223	ENST00000497822	ZNF518A	Q6AHZ1	1483 aa		31.29	■■■□□ 2.6
C1orf61-223	ENST00000497822	LMTK3	Q96Q04	1460 aa		31.28	■■■□□ 2.6
C1orf61-223	ENST00000497822	C9orf84	Q5VXU9	1444 aa		31.28	■■■□□ 2.6
C1orf61-223	ENST00000497822	ARHGEF12	Q9NZN5	1544 aa		31.28	■■■□□ 2.6
C1orf61-223	ENST00000497822	MYT1L	Q9UL68	1186 aa		31.27	■■■□□ 2.6
C1orf61-223	ENST00000497822	KDM5C	P41229	1560 aa		31.26	■■■□□ 2.59
C1orf61-223	ENST00000497822	TRAPPC8	Q9Y2L5	1435 aa		31.25	■■■□□ 2.59
C1orf61-223	ENST00000497822	PREX2	Q70Z35	1606 aa		31.24	■■■□□ 2.59
C1orf61-223	ENST00000497822	HSPA2	P54652	639 aa		31.23	■■■□□ 2.59
C1orf61-223	ENST00000497822	FER1L4	A9Z1Z3	1794 aa		31.2	■■■□□ 2.59
C1orf61-223	ENST00000497822	CDC42BPA	Q5VT25	1732 aa		31.2	■■■□□ 2.58
C1orf61-223	ENST00000497822	ABCC1	P33527	1531 aa		31.19	■■■□□ 2.58
C1orf61-223	ENST00000497822	ZNF777	Q9ULD5	760 aa	Predicted RBP	31.19	■■■□□ 2.58
C1orf61-223	ENST00000497822	CEBPA	P49715	358 aa	Predicted RBP	31.18	■■■□□ 2.58
C1orf61-223	ENST00000497822	DIP2C	Q9Y2E4	1556 aa		31.17	■■■□□ 2.58
C1orf61-223	ENST00000497822	MLH3	Q9UHC1	1453 aa		31.15	■■■□□ 2.58
C1orf61-223	ENST00000497822	ABCA6	Q8N139	1617 aa		31.14	■■■□□ 2.58
C1orf61-223	ENST00000497822	ITSN2	Q9NZM3	1697 aa		31.14	■■■□□ 2.58
C1orf61-223	ENST00000497822	GPATCH8	Q9UKJ3	1502 aa	Known RBP	31.14	■■■□□ 2.57
C1orf61-223	ENST00000497822	HNRNPM	P52272	730 aa	Known RBP eCLIP	31.1	■■■□□ 2.57
C1orf61-223	ENST00000497822	SAMD9L	Q8IVG5	1584 aa		31.09	■■■□□ 2.57
C1orf61-223	ENST00000497822	KIDINS220	Q9ULH0	1771 aa		31.05	■■■□□ 2.56
C1orf61-223	ENST00000497822	CEP162	Q5TB80	1403 aa		31.05	■■■□□ 2.56
C1orf61-223	ENST00000497822	RERE	Q9P2R6	1566 aa		31.05	■■■□□ 2.56
C1orf61-223	ENST00000497822	CFDP1	Q9UEE9	299 aa	Predicted RBP	31.04	■■■□□ 2.56
C1orf61-223	ENST00000497822	MTUS2	Q5JR59	1369 aa		31.04	■■■□□ 2.56
C1orf61-223	ENST00000497822	SYCP2	Q9BX26	1530 aa		31.03	■■■□□ 2.56
C1orf61-223	ENST00000497822	CCNB3	Q8WWL7	1395 aa		31.03	■■■□□ 2.56
C1orf61-223	ENST00000497822	SPAG9	O60271	1321 aa	Known RBP	30.98	■■■□□ 2.55
C1orf61-223	ENST00000497822	AGL	P35573	1532 aa		30.98	■■■□□ 2.55
C1orf61-223	ENST00000497822	ZNF644	Q9H582	1327 aa	Predicted RBP	30.98	■■■□□ 2.55
C1orf61-223	ENST00000497822	LOC105371045	A0A1W2PR82	267 aa		30.97	■■■□□ 2.55
C1orf61-223	ENST00000497822	FBXO41	Q8TF61	875 aa		30.94	■■■□□ 2.54
C1orf61-223	ENST00000497822	KIAA1107	Q9UPP5	1409 aa		30.93	■■■□□ 2.54
C1orf61-223	ENST00000497822	PREX1	Q8TCU6	1659 aa		30.91	■■■□□ 2.54
C1orf61-223	ENST00000497822	ESF1	Q9H501	851 aa	Known RBP	30.91	■■■□□ 2.54
C1orf61-223	ENST00000497822	TIAM1	Q13009	1591 aa		30.89	■■■□□ 2.54
C1orf61-223	ENST00000497822	C3	P01024	1663 aa		30.88	■■■□□ 2.53
C1orf61-223	ENST00000497822	PLEKHH2	Q8IVE3	1493 aa		30.88	■■■□□ 2.53
C1orf61-223	ENST00000497822	ATP7A	Q04656	1500 aa		30.87	■■■□□ 2.53
C1orf61-223	ENST00000497822	EHBP1L1	Q8N3D4	1523 aa		30.87	■■■□□ 2.53
C1orf61-223	ENST00000497822	SUPT6H	Q7KZ85	1726 aa	Known RBP	30.84	■■■□□ 2.53
C1orf61-223	ENST00000497822	UHRF1BP1	Q6BDS2	1440 aa		30.83	■■■□□ 2.53
C1orf61-223	ENST00000497822	INO80	Q9ULG1	1556 aa	Predicted RBP	30.83	■■■□□ 2.53
C1orf61-223	ENST00000497822	SETD1B	Q9UPS6	1966 aa	Known RBP	30.81	■■■□□ 2.52
C1orf61-223	ENST00000497822	MBD5	Q9P267	1494 aa		30.81	■■■□□ 2.52
C1orf61-223	ENST00000497822	A2M	P01023	1474 aa		30.79	■■■□□ 2.52
C1orf61-223	ENST00000497822	STRC	Q7RTU9	1775 aa		30.77	■■■□□ 2.52
C1orf61-223	ENST00000497822	CNTLN	Q9NXG0	1405 aa		30.77	■■■□□ 2.52
C1orf61-223	ENST00000497822	NCOA2	Q15596	1464 aa		30.76	■■■□□ 2.52
C1orf61-223	ENST00000497822	PLXNC1	O60486	1568 aa		30.75	■■■□□ 2.51
C1orf61-223	ENST00000497822	GGT6	Q6P531	493 aa		30.75	■■■□□ 2.51
C1orf61-223	ENST00000497822	ZMYM3	Q14202	1370 aa		30.75	■■■□□ 2.51
C1orf61-223	ENST00000497822	CERK	Q8TCT0	537 aa		30.74	■■■□□ 2.51
C1orf61-223	ENST00000497822	VPS8	Q8N3P4	1428 aa		30.69	■■■□□ 2.5
C1orf61-223	ENST00000497822	CLTC	Q00610	1675 aa	Known RBP	30.68	■■■□□ 2.5
C1orf61-223	ENST00000497822	MROH2A	A6NES4	1674 aa		30.66	■■■□□ 2.5
C1orf61-223	ENST00000497822	CAMSAP2	Q08AD1	1489 aa		30.66	■■■□□ 2.5
C1orf61-223	ENST00000497822	DMRT2	Q9Y5R5	561 aa		30.66	■■■□□ 2.5
C1orf61-223	ENST00000497822	ADGB	Q8N7X0	1667 aa		30.65	■■■□□ 2.5
C1orf61-223	ENST00000497822	KANK4	Q5T7N3	995 aa	Predicted RBP	30.65	■■■□□ 2.5
C1orf61-223	ENST00000497822	RTEL1-TNFRSF6B	F6WH68	1400 aa		30.64	■■■□□ 2.5
C1orf61-223	ENST00000497822	NPAT	Q14207	1427 aa		30.64	■■■□□ 2.49
C1orf61-223	ENST00000497822	DHX29	Q7Z478	1369 aa	Known RBP	30.62	■■■□□ 2.49
C1orf61-223	ENST00000497822	LRRC9	Q6ZRR7	1453 aa		30.62	■■■□□ 2.49
C1orf61-223	ENST00000497822	CCDC141	Q6ZP82	1450 aa		30.61	■■■□□ 2.49
C1orf61-223	ENST00000497822	PTPRK	Q15262	1439 aa		30.59	■■■□□ 2.49
C1orf61-223	ENST00000497822	NCOA1	Q15788	1441 aa		30.57	■■■□□ 2.48
C1orf61-223	ENST00000497822	KIF3B	O15066	747 aa		30.57	■■■□□ 2.48
C1orf61-223	ENST00000497822	PTPRT	O14522	1441 aa		30.56	■■■□□ 2.48
C1orf61-223	ENST00000497822	PPP6R1	Q9UPN7	881 aa		30.55	■■■□□ 2.48
C1orf61-223	ENST00000497822	RSPH4A	Q5TD94	716 aa		30.54	■■■□□ 2.48
C1orf61-223	ENST00000497822	CAMSAP1	Q5T5Y3	1602 aa		30.54	■■■□□ 2.48
C1orf61-223	ENST00000497822	NCKAP5L	Q9HCH0	1330 aa		30.53	■■■□□ 2.48
C1orf61-223	ENST00000497822	TSPY4	P0CV99	314 aa		30.49	■■■□□ 2.47
C1orf61-223	ENST00000497822	TSPY10	P0CW01	314 aa		30.49	■■■□□ 2.47
C1orf61-223	ENST00000497822	FBXO31	Q5XUX0	539 aa	Predicted RBP	30.49	■■■□□ 2.47
C1orf61-223	ENST00000497822	ARHGEF5	Q12774	1597 aa		30.49	■■■□□ 2.47
C1orf61-223	ENST00000497822	MYO3A	Q8NEV4	1616 aa		30.48	■■■□□ 2.47
C1orf61-223	ENST00000497822	MAP3K1	Q13233	1512 aa		30.46	■■■□□ 2.47
C1orf61-223	ENST00000497822	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	30.44	■■■□□ 2.46
C1orf61-223	ENST00000497822	WASHC2C	Q9Y4E1	1318 aa		30.42	■■■□□ 2.46

Retrieved 100 of 20,778 RNA–protein pairs in 1029.3 ms