RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 FRMPD1Q5SYB0 1578 aa21.82■■□□□ 1.08
VPS26A-209ENST00000497564 AKNAQ7Z591 1439 aa21.81■■□□□ 1.08
VPS26A-209ENST00000497564 PLCH2O75038 1416 aa21.8■■□□□ 1.08
VPS26A-209ENST00000497564 NCOA2Q15596 1464 aa21.78■■□□□ 1.08
VPS26A-209ENST00000497564 RRBP1Q9P2E9 1410 aaKnown RBP21.77■■□□□ 1.08
VPS26A-209ENST00000497564 MYO5CQ9NQX4 1742 aa21.77■■□□□ 1.08
VPS26A-209ENST00000497564 CFAP74Q9C0B2 1584 aa21.76■■□□□ 1.07
VPS26A-209ENST00000497564 ADGRL1O94910 1474 aa21.76■■□□□ 1.07
VPS26A-209ENST00000497564 DENND4BO75064 1496 aaPredicted RBP21.75■■□□□ 1.07
VPS26A-209ENST00000497564 RICTORQ6R327 1708 aa21.75■■□□□ 1.07
VPS26A-209ENST00000497564 ITSN2Q9NZM3 1697 aa21.72■■□□□ 1.07
VPS26A-209ENST00000497564 ARHGAP5Q13017 1502 aa21.7■■□□□ 1.07
VPS26A-209ENST00000497564 CDC42BPBQ9Y5S2 1711 aa21.7■■□□□ 1.06
VPS26A-209ENST00000497564 EFCAB2Q5VUJ9 269 aa21.7■■□□□ 1.06
VPS26A-209ENST00000497564 PCGF6Q9BYE7 350 aa21.7■■□□□ 1.06
VPS26A-209ENST00000497564 SCAPERQ9BY12 1400 aa21.7■■□□□ 1.06
VPS26A-209ENST00000497564 MYOM3Q5VTT5 1437 aa21.69■■□□□ 1.06
VPS26A-209ENST00000497564 CDC42BPAQ5VT25 1732 aa21.69■■□□□ 1.06
VPS26A-209ENST00000497564 PREX2Q70Z35 1606 aa21.67■■□□□ 1.06
VPS26A-209ENST00000497564 POGZQ7Z3K3 1410 aa21.66■■□□□ 1.06
VPS26A-209ENST00000497564 FGD6Q6ZV73 1430 aa21.65■■□□□ 1.06
VPS26A-209ENST00000497564 CCNB3Q8WWL7 1395 aa21.65■■□□□ 1.06
VPS26A-209ENST00000497564 ZMYM4Q5VZL5 1548 aa21.65■■□□□ 1.06
VPS26A-209ENST00000497564 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.64■■□□□ 1.069e-8■□□□□ 9.9
VPS26A-209ENST00000497564 ARHGEF40Q8TER5 1519 aa21.64■■□□□ 1.05
VPS26A-209ENST00000497564 YEATS2Q9ULM3 1422 aa21.63■■□□□ 1.05
VPS26A-209ENST00000497564 PTPN23Q9H3S7 1636 aa21.63■■□□□ 1.05
VPS26A-209ENST00000497564 MIA2Q96PC5 1412 aa21.62■■□□□ 1.05
VPS26A-209ENST00000497564 GPATCH8Q9UKJ3 1502 aaKnown RBP21.61■■□□□ 1.05
VPS26A-209ENST00000497564 ARHGEF12Q9NZN5 1544 aa21.6■■□□□ 1.05
VPS26A-209ENST00000497564 TCOF1Q13428 1488 aaKnown RBP21.59■■□□□ 1.05
VPS26A-209ENST00000497564 AFAP1Q8N556 730 aa21.59■■□□□ 1.05
VPS26A-209ENST00000497564 ZFYVE16Q7Z3T8 1539 aa21.59■■□□□ 1.05
VPS26A-209ENST00000497564 SIGLEC1Q9BZZ2 1709 aa21.58■■□□□ 1.05
VPS26A-209ENST00000497564 ABCC1P33527 1531 aa21.58■■□□□ 1.04
VPS26A-209ENST00000497564 TRAPPC8Q9Y2L5 1435 aa21.56■■□□□ 1.04
VPS26A-209ENST00000497564 ZNF777Q9ULD5 760 aaPredicted RBP21.55■■□□□ 1.04
VPS26A-209ENST00000497564 ZNF518AQ6AHZ1 1483 aa21.55■■□□□ 1.04
VPS26A-209ENST00000497564 MAGI2Q86UL8 1455 aa21.55■■□□□ 1.04
VPS26A-209ENST00000497564 SAMD9LQ8IVG5 1584 aa21.55■■□□□ 1.04
VPS26A-209ENST00000497564 KDM5CP41229 1560 aa21.54■■□□□ 1.04
VPS26A-209ENST00000497564 ARID4BQ4LE39 1312 aaPredicted RBP21.54■■□□□ 1.04
VPS26A-209ENST00000497564 ADAMTSL3P82987 1691 aa21.51■■□□□ 1.03
VPS26A-209ENST00000497564 BCORL1Q5H9F3 1711 aa21.51■■□□□ 1.03
VPS26A-209ENST00000497564 CFDP1Q9UEE9 299 aaPredicted RBP21.5■■□□□ 1.03
VPS26A-209ENST00000497564 SYCP2Q9BX26 1530 aa21.5■■□□□ 1.03
VPS26A-209ENST00000497564 HNRNPMP52272 730 aaKnown RBP eCLIP21.48■■□□□ 1.032e-7■■■■■ 29.2
VPS26A-209ENST00000497564 ZNF644Q9H582 1327 aaPredicted RBP21.48■■□□□ 1.03
VPS26A-209ENST00000497564 HECW2Q9P2P5 1572 aa21.48■■□□□ 1.03
VPS26A-209ENST00000497564 ATP10AO60312 1499 aa21.47■■□□□ 1.03
VPS26A-209ENST00000497564 DNMT1P26358 1616 aaKnown RBP21.47■■□□□ 1.03
VPS26A-209ENST00000497564 MADDQ8WXG6 1647 aa21.47■■□□□ 1.03
VPS26A-209ENST00000497564 CAMSAP2Q08AD1 1489 aa21.45■■□□□ 1.03
VPS26A-209ENST00000497564 DIP2CQ9Y2E4 1556 aa21.45■■□□□ 1.02
VPS26A-209ENST00000497564 ABCA6Q8N139 1617 aa21.45■■□□□ 1.02
VPS26A-209ENST00000497564 CROCC2H7BZ55 1655 aa21.45■■□□□ 1.02
VPS26A-209ENST00000497564 MLH3Q9UHC1 1453 aa21.45■■□□□ 1.02
VPS26A-209ENST00000497564 FAM50AQ14320 339 aaKnown RBP21.44■■□□□ 1.02
VPS26A-209ENST00000497564 MYT1LQ9UL68 1186 aa21.44■■□□□ 1.02
VPS26A-209ENST00000497564 C9orf84Q5VXU9 1444 aa21.44■■□□□ 1.02
VPS26A-209ENST00000497564 KIDINS220Q9ULH0 1771 aa21.43■■□□□ 1.02
VPS26A-209ENST00000497564 PTPRMP28827 1452 aa21.42■■□□□ 1.02
VPS26A-209ENST00000497564 MLECQ14165 292 aa21.42■■□□□ 1.02
VPS26A-209ENST00000497564 KIAA1107Q9UPP5 1409 aa21.42■■□□□ 1.02
VPS26A-209ENST00000497564 ARHGEF5Q12774 1597 aa21.4■■□□□ 1.02
VPS26A-209ENST00000497564 PLEKHH2Q8IVE3 1493 aa21.39■■□□□ 1.02
VPS26A-209ENST00000497564 RIMS1Q86UR5 1692 aaKnown RBP21.38■■□□□ 1.01
VPS26A-209ENST00000497564 ADGBQ8N7X0 1667 aa21.38■■□□□ 1.01
VPS26A-209ENST00000497564 MBD5Q9P267 1494 aa21.38■■□□□ 1.01
VPS26A-209ENST00000497564 SPAG9O60271 1321 aaKnown RBP21.36■■□□□ 1.01
VPS26A-209ENST00000497564 DAPK1P53355 1430 aa21.35■■□□□ 1.01
VPS26A-209ENST00000497564 REREQ9P2R6 1566 aa21.35■■□□□ 1.01
VPS26A-209ENST00000497564 GCC2Q8IWJ2 1684 aa21.34■■□□□ 1.01
VPS26A-209ENST00000497564 PTPRKQ15262 1439 aa21.34■■□□□ 1.01
VPS26A-209ENST00000497564 INO80Q9ULG1 1556 aaPredicted RBP21.34■■□□□ 1.01
VPS26A-209ENST00000497564 ATP7AQ04656 1500 aa21.34■■□□□ 1.01
VPS26A-209ENST00000497564 ABCC5O15440 1437 aa21.32■■□□□ 1
VPS26A-209ENST00000497564 FER1L4A9Z1Z3 1794 aa21.32■■□□□ 1
VPS26A-209ENST00000497564 SHANK2Q9UPX8 1470 aa21.32■■□□□ 1
VPS26A-209ENST00000497564 PLPPR3Q6T4P5 718 aa21.31■■□□□ 1
VPS26A-209ENST00000497564 ITGAEP38570 1179 aa21.29■■□□□ 1
VPS26A-209ENST00000497564 MAST1Q9Y2H9 1570 aa21.28■■□□□ 1
VPS26A-209ENST00000497564 AGLP35573 1532 aa21.28■■□□□ 1
VPS26A-209ENST00000497564 HFM1A2PYH4 1435 aa21.27■■□□□ 1
VPS26A-209ENST00000497564 ADGRL2O95490 1459 aa21.26■□□□□ 0.99
VPS26A-209ENST00000497564 CCDC141Q6ZP82 1450 aa21.26■□□□□ 0.99
VPS26A-209ENST00000497564 ROCK1Q13464 1354 aa21.26■□□□□ 0.99
VPS26A-209ENST00000497564 RSPH4AQ5TD94 716 aa21.25■□□□□ 0.99
VPS26A-209ENST00000497564 PLXNC1O60486 1568 aa21.24■□□□□ 0.99
VPS26A-209ENST00000497564 SETD5Q9C0A6 1442 aa21.24■□□□□ 0.99
VPS26A-209ENST00000497564 CEBPAP49715 358 aaPredicted RBP21.23■□□□□ 0.99
VPS26A-209ENST00000497564 A2MP01023 1474 aa21.23■□□□□ 0.99
VPS26A-209ENST00000497564 NAIPQ13075 1403 aa21.21■□□□□ 0.99
VPS26A-209ENST00000497564 RTEL1-TNFRSF6BF6WH68 1400 aa21.21■□□□□ 0.99
VPS26A-209ENST00000497564 HRCP23327 699 aa21.19■□□□□ 0.98
VPS26A-209ENST00000497564 RAB3GAP2Q9H2M9 1393 aa21.18■□□□□ 0.98
VPS26A-209ENST00000497564 LMTK3Q96Q04 1460 aa21.18■□□□□ 0.98
VPS26A-209ENST00000497564 NCOA1Q15788 1441 aa21.16■□□□□ 0.98
VPS26A-209ENST00000497564 DHX29Q7Z478 1369 aaKnown RBP21.14■□□□□ 0.98
VPS26A-209ENST00000497564 ANKRD30AQ9BXX3 1397 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms