RNA–Protein interactions for RNA: ENST00000497399.1

TCTN3-206, Transcript of tectonic family member 3, humanhuman

TSL 5

Gene TCTN3, Length 800 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-206ENST00000497399 PLEKHD1A6NEE1 506 aa15.2■□□□□ 0.02
TCTN3-206ENST00000497399 NCOA2Q15596 1464 aa15.2■□□□□ 0.02
TCTN3-206ENST00000497399 NEO1Q92859 1461 aa15.2■□□□□ 0.02
TCTN3-206ENST00000497399 PHLDB1Q86UU1 1377 aa15.18■□□□□ 0.02
TCTN3-206ENST00000497399 RAPGEF3O95398 923 aa15.17■□□□□ 0.02
TCTN3-206ENST00000497399 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.16■□□□□ 0.02
TCTN3-206ENST00000497399 MADDQ8WXG6 1647 aa15.15■□□□□ 0.02
TCTN3-206ENST00000497399 TTC37Q6PGP7 1564 aa15.15■□□□□ 0.02
TCTN3-206ENST00000497399 PTPRMP28827 1452 aa15.14■□□□□ 0.01
TCTN3-206ENST00000497399 CDC42BPAQ5VT25 1732 aa15.12■□□□□ 0.01
TCTN3-206ENST00000497399 MYOM3Q5VTT5 1437 aa15.1■□□□□ 0.01
TCTN3-206ENST00000497399 ITSN2Q9NZM3 1697 aa15.09■□□□□ 0.01
TCTN3-206ENST00000497399 RRBP1Q9P2E9 1410 aaKnown RBP15.09■□□□□ 0.01
TCTN3-206ENST00000497399 ARHGEF40Q8TER5 1519 aa15.09■□□□□ 0.01
TCTN3-206ENST00000497399 GPATCH8Q9UKJ3 1502 aaKnown RBP15.09■□□□□ 0.01
TCTN3-206ENST00000497399 RIMS1Q86UR5 1692 aaKnown RBP15.09■□□□□ 0.01
TCTN3-206ENST00000497399 ZMYM4Q5VZL5 1548 aa15.08■□□□□ 0.01
TCTN3-206ENST00000497399 MYO5CQ9NQX4 1742 aa15.08■□□□□ 0
TCTN3-206ENST00000497399 CDC42BPBQ9Y5S2 1711 aa15.08■□□□□ 0
TCTN3-206ENST00000497399 CCNB3Q8WWL7 1395 aa15.08■□□□□ 0
TCTN3-206ENST00000497399 FGD6Q6ZV73 1430 aa15.08■□□□□ 0
TCTN3-206ENST00000497399 AKNAQ7Z591 1439 aa15.08■□□□□ 0
TCTN3-206ENST00000497399 CFAP74Q9C0B2 1584 aa15.07■□□□□ 0
TCTN3-206ENST00000497399 PREX2Q70Z35 1606 aa15.07■□□□□ 0
TCTN3-206ENST00000497399 TRIM26Q12899 539 aaPredicted RBP15.07■□□□□ 0
TCTN3-206ENST00000497399 FANCAO15360 1455 aa15.07■□□□□ 0
TCTN3-206ENST00000497399 DENND4BO75064 1496 aaPredicted RBP15.05■□□□□ -0
TCTN3-206ENST00000497399 LMTK3Q96Q04 1460 aa15.05■□□□□ -0
TCTN3-206ENST00000497399 PTPN23Q9H3S7 1636 aa15.04■□□□□ -0
TCTN3-206ENST00000497399 MIA2Q96PC5 1412 aa15.04■□□□□ -0
TCTN3-206ENST00000497399 YEATS2Q9ULM3 1422 aa15.04■□□□□ -0
TCTN3-206ENST00000497399 TCOF1Q13428 1488 aaKnown RBP15.03■□□□□ -0
TCTN3-206ENST00000497399 PLCH2O75038 1416 aa15.01□□□□□ -0.01
TCTN3-206ENST00000497399 FER1L4A9Z1Z3 1794 aa15□□□□□ -0.01
TCTN3-206ENST00000497399 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.99□□□□□ -0.01
TCTN3-206ENST00000497399 CFDP1Q9UEE9 299 aaPredicted RBP14.99□□□□□ -0.01
TCTN3-206ENST00000497399 SAMD9LQ8IVG5 1584 aa14.98□□□□□ -0.01
TCTN3-206ENST00000497399 ARHGAP5Q13017 1502 aa14.98□□□□□ -0.01
TCTN3-206ENST00000497399 ZFYVE16Q7Z3T8 1539 aa14.98□□□□□ -0.01
TCTN3-206ENST00000497399 CAMSAP2Q08AD1 1489 aa14.98□□□□□ -0.01
TCTN3-206ENST00000497399 ZNF644Q9H582 1327 aaPredicted RBP14.97□□□□□ -0.01
TCTN3-206ENST00000497399 MAGI2Q86UL8 1455 aa14.97□□□□□ -0.01
TCTN3-206ENST00000497399 PCGF6Q9BYE7 350 aa14.97□□□□□ -0.01
TCTN3-206ENST00000497399 FAM50AQ14320 339 aaKnown RBP14.96□□□□□ -0.01
TCTN3-206ENST00000497399 POGZQ7Z3K3 1410 aa14.95□□□□□ -0.02
TCTN3-206ENST00000497399 SCAPERQ9BY12 1400 aa14.95□□□□□ -0.02
TCTN3-206ENST00000497399 ARID4BQ4LE39 1312 aaPredicted RBP14.94□□□□□ -0.02
TCTN3-206ENST00000497399 ARHGEF12Q9NZN5 1544 aa14.94□□□□□ -0.02
TCTN3-206ENST00000497399 ZNF777Q9ULD5 760 aaPredicted RBP14.94□□□□□ -0.02
TCTN3-206ENST00000497399 DNMT1P26358 1616 aaKnown RBP14.93□□□□□ -0.02
TCTN3-206ENST00000497399 KDM5CP41229 1560 aa14.93□□□□□ -0.02
TCTN3-206ENST00000497399 EFCAB2Q5VUJ9 269 aa14.92□□□□□ -0.02
TCTN3-206ENST00000497399 ABCC1P33527 1531 aa14.92□□□□□ -0.02
TCTN3-206ENST00000497399 MBD5Q9P267 1494 aa14.91□□□□□ -0.02
TCTN3-206ENST00000497399 FBXO41Q8TF61 875 aa14.91□□□□□ -0.02
TCTN3-206ENST00000497399 PTPRKQ15262 1439 aa14.91□□□□□ -0.02
TCTN3-206ENST00000497399 STRCQ7RTU9 1775 aa14.9□□□□□ -0.02
TCTN3-206ENST00000497399 ARHGEF5Q12774 1597 aa14.9□□□□□ -0.02
TCTN3-206ENST00000497399 ATP10AO60312 1499 aa14.9□□□□□ -0.02
TCTN3-206ENST00000497399 SYCP2Q9BX26 1530 aa14.9□□□□□ -0.02
TCTN3-206ENST00000497399 CROCC2H7BZ55 1655 aa14.9□□□□□ -0.02
TCTN3-206ENST00000497399 PLEKHH2Q8IVE3 1493 aa14.89□□□□□ -0.03
TCTN3-206ENST00000497399 HSPA2P54652 639 aa14.89□□□□□ -0.03
TCTN3-206ENST00000497399 ABCC5O15440 1437 aa14.89□□□□□ -0.03
TCTN3-206ENST00000497399 DAPK1P53355 1430 aa14.89□□□□□ -0.03
TCTN3-206ENST00000497399 KIAA1107Q9UPP5 1409 aa14.89□□□□□ -0.03
TCTN3-206ENST00000497399 PREX1Q8TCU6 1659 aa14.88□□□□□ -0.03
TCTN3-206ENST00000497399 ITGAEP38570 1179 aa14.88□□□□□ -0.03
TCTN3-206ENST00000497399 DIP2CQ9Y2E4 1556 aa14.88□□□□□ -0.03
TCTN3-206ENST00000497399 ABCA6Q8N139 1617 aa14.88□□□□□ -0.03
TCTN3-206ENST00000497399 SETD1BQ9UPS6 1966 aaKnown RBP14.87□□□□□ -0.03
TCTN3-206ENST00000497399 REREQ9P2R6 1566 aa14.87□□□□□ -0.03
TCTN3-206ENST00000497399 HNRNPMP52272 730 aaKnown RBP eCLIP14.87□□□□□ -0.03
TCTN3-206ENST00000497399 KIDINS220Q9ULH0 1771 aa14.86□□□□□ -0.03
TCTN3-206ENST00000497399 C9orf84Q5VXU9 1444 aa14.86□□□□□ -0.03
TCTN3-206ENST00000497399 C3P01024 1663 aa14.86□□□□□ -0.03
TCTN3-206ENST00000497399 CCDC141Q6ZP82 1450 aa14.85□□□□□ -0.03
TCTN3-206ENST00000497399 MLECQ14165 292 aa14.84□□□□□ -0.03
TCTN3-206ENST00000497399 AFAP1Q8N556 730 aa14.84□□□□□ -0.03
TCTN3-206ENST00000497399 ADGBQ8N7X0 1667 aa14.84□□□□□ -0.03
TCTN3-206ENST00000497399 TRAPPC8Q9Y2L5 1435 aa14.83□□□□□ -0.03
TCTN3-206ENST00000497399 ZNF518AQ6AHZ1 1483 aa14.83□□□□□ -0.03
TCTN3-206ENST00000497399 SHANK2Q9UPX8 1470 aa14.82□□□□□ -0.04
TCTN3-206ENST00000497399 MAST1Q9Y2H9 1570 aa14.82□□□□□ -0.04
TCTN3-206ENST00000497399 RSPH4AQ5TD94 716 aa14.82□□□□□ -0.04
TCTN3-206ENST00000497399 MLH3Q9UHC1 1453 aa14.82□□□□□ -0.04
TCTN3-206ENST00000497399 CEBPAP49715 358 aaPredicted RBP14.81□□□□□ -0.04
TCTN3-206ENST00000497399 PLPPR3Q6T4P5 718 aa14.8□□□□□ -0.04
TCTN3-206ENST00000497399 CHIC2Q9UKJ5 165 aa14.8□□□□□ -0.04
TCTN3-206ENST00000497399 ADGRL2O95490 1459 aa14.8□□□□□ -0.04
TCTN3-206ENST00000497399 GCC2Q8IWJ2 1684 aa14.79□□□□□ -0.04
TCTN3-206ENST00000497399 AGLP35573 1532 aa14.78□□□□□ -0.04
TCTN3-206ENST00000497399 ROCK1Q13464 1354 aa14.78□□□□□ -0.04
TCTN3-206ENST00000497399 INO80Q9ULG1 1556 aaPredicted RBP14.77□□□□□ -0.04
TCTN3-206ENST00000497399 TSPY4P0CV99 314 aa14.77□□□□□ -0.05
TCTN3-206ENST00000497399 TSPY10P0CW01 314 aa14.77□□□□□ -0.05
TCTN3-206ENST00000497399 HFM1A2PYH4 1435 aa14.76□□□□□ -0.05
TCTN3-206ENST00000497399 NAIPQ13075 1403 aa14.76□□□□□ -0.05
TCTN3-206ENST00000497399 NCOA1Q15788 1441 aa14.76□□□□□ -0.05
TCTN3-206ENST00000497399 RRP7BPQ9NSQ0 103 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms