RNA–Protein interactions for RNA: ENST00000497316.5

COL1A2-212, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 962 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-212ENST00000497316 CDC42BPBQ9Y5S2 1711 aa25.46■■□□□ 1.67
COL1A2-212ENST00000497316 TIAM1Q13009 1591 aa25.45■■□□□ 1.66
COL1A2-212ENST00000497316 FRMPD1Q5SYB0 1578 aa25.45■■□□□ 1.66
COL1A2-212ENST00000497316 MAP3K1Q13233 1512 aa25.45■■□□□ 1.66
COL1A2-212ENST00000497316 ADGRL1O94910 1474 aa25.45■■□□□ 1.66
COL1A2-212ENST00000497316 RICTORQ6R327 1708 aa25.43■■□□□ 1.66
COL1A2-212ENST00000497316 CDC42BPAQ5VT25 1732 aa25.43■■□□□ 1.66
COL1A2-212ENST00000497316 SCAPERQ9BY12 1400 aa25.42■■□□□ 1.66
COL1A2-212ENST00000497316 GPATCH8Q9UKJ3 1502 aaKnown RBP25.4■■□□□ 1.66
COL1A2-212ENST00000497316 POGZQ7Z3K3 1410 aa25.37■■□□□ 1.65
COL1A2-212ENST00000497316 ZMYM4Q5VZL5 1548 aa25.37■■□□□ 1.65
COL1A2-212ENST00000497316 CCNB3Q8WWL7 1395 aa25.37■■□□□ 1.65
COL1A2-212ENST00000497316 LRRC9Q6ZRR7 1453 aa25.34■■□□□ 1.65
COL1A2-212ENST00000497316 SUPT6HQ7KZ85 1726 aaKnown RBP25.34■■□□□ 1.65
COL1A2-212ENST00000497316 MAGI2Q86UL8 1455 aa25.34■■□□□ 1.65
COL1A2-212ENST00000497316 ABCC1P33527 1531 aa25.32■■□□□ 1.64
COL1A2-212ENST00000497316 NCOA2Q15596 1464 aa25.31■■□□□ 1.64
COL1A2-212ENST00000497316 ZNF518AQ6AHZ1 1483 aa25.31■■□□□ 1.64
COL1A2-212ENST00000497316 CFDP1Q9UEE9 299 aaPredicted RBP25.3■■□□□ 1.64
COL1A2-212ENST00000497316 ITSN2Q9NZM3 1697 aa25.29■■□□□ 1.64
COL1A2-212ENST00000497316 ARHGEF40Q8TER5 1519 aa25.29■■□□□ 1.64
COL1A2-212ENST00000497316 APLP2Q06481 763 aa25.28■■□□□ 1.64
COL1A2-212ENST00000497316 ARHGEF12Q9NZN5 1544 aa25.27■■□□□ 1.64
COL1A2-212ENST00000497316 KDM5CP41229 1560 aa25.27■■□□□ 1.64
COL1A2-212ENST00000497316 SAMD9LQ8IVG5 1584 aa25.27■■□□□ 1.64
COL1A2-212ENST00000497316 PLEKHH2Q8IVE3 1493 aa25.27■■□□□ 1.64
COL1A2-212ENST00000497316 KANK4Q5T7N3 995 aaPredicted RBP25.26■■□□□ 1.63
COL1A2-212ENST00000497316 KIAA1107Q9UPP5 1409 aa25.26■■□□□ 1.63
COL1A2-212ENST00000497316 ZFYVE16Q7Z3T8 1539 aa25.26■■□□□ 1.63
COL1A2-212ENST00000497316 AFAP1Q8N556 730 aa25.24■■□□□ 1.63
COL1A2-212ENST00000497316 ZNF777Q9ULD5 760 aaPredicted RBP25.24■■□□□ 1.63
COL1A2-212ENST00000497316 TRAPPC8Q9Y2L5 1435 aa25.22■■□□□ 1.63
COL1A2-212ENST00000497316 YEATS2Q9ULM3 1422 aa25.21■■□□□ 1.63
COL1A2-212ENST00000497316 MLH3Q9UHC1 1453 aa25.21■■□□□ 1.63
COL1A2-212ENST00000497316 SYCP2Q9BX26 1530 aa25.19■■□□□ 1.62
COL1A2-212ENST00000497316 HECW2Q9P2P5 1572 aa25.18■■□□□ 1.62
COL1A2-212ENST00000497316 ATP10AO60312 1499 aa25.16■■□□□ 1.62
COL1A2-212ENST00000497316 HNRNPMP52272 730 aaKnown RBP eCLIP25.16■■□□□ 1.62
COL1A2-212ENST00000497316 ZNF644Q9H582 1327 aaPredicted RBP25.13■■□□□ 1.61
COL1A2-212ENST00000497316 C9orf84Q5VXU9 1444 aa25.12■■□□□ 1.61
COL1A2-212ENST00000497316 MBD5Q9P267 1494 aa25.12■■□□□ 1.61
COL1A2-212ENST00000497316 MYOM3Q5VTT5 1437 aa25.12■■□□□ 1.61
COL1A2-212ENST00000497316 MIA2Q96PC5 1412 aa25.11■■□□□ 1.61
COL1A2-212ENST00000497316 ARID4BQ4LE39 1312 aaPredicted RBP25.11■■□□□ 1.61
COL1A2-212ENST00000497316 KIDINS220Q9ULH0 1771 aa25.1■■□□□ 1.61
COL1A2-212ENST00000497316 DIP2CQ9Y2E4 1556 aa25.1■■□□□ 1.61
COL1A2-212ENST00000497316 REREQ9P2R6 1566 aa25.1■■□□□ 1.61
COL1A2-212ENST00000497316 CAMSAP2Q08AD1 1489 aa25.09■■□□□ 1.61
COL1A2-212ENST00000497316 BCORL1Q5H9F3 1711 aa25.09■■□□□ 1.61
COL1A2-212ENST00000497316 MYT1LQ9UL68 1186 aa25.09■■□□□ 1.61
COL1A2-212ENST00000497316 ADAMTSL3P82987 1691 aa25.09■■□□□ 1.61
COL1A2-212ENST00000497316 SPAG9O60271 1321 aaKnown RBP25.09■■□□□ 1.61
COL1A2-212ENST00000497316 RSPH4AQ5TD94 716 aa25.08■■□□□ 1.61
COL1A2-212ENST00000497316 ABCA6Q8N139 1617 aa25.08■■□□□ 1.6
COL1A2-212ENST00000497316 SIGLEC1Q9BZZ2 1709 aa25.06■■□□□ 1.6
COL1A2-212ENST00000497316 INO80Q9ULG1 1556 aaPredicted RBP25.05■■□□□ 1.6
COL1A2-212ENST00000497316 ATP7AQ04656 1500 aa25.04■■□□□ 1.6
COL1A2-212ENST00000497316 ARHGEF5Q12774 1597 aa25.03■■□□□ 1.6
COL1A2-212ENST00000497316 RTEL1-TNFRSF6BF6WH68 1400 aa25.03■■□□□ 1.6
COL1A2-212ENST00000497316 CCDC141Q6ZP82 1450 aa25.02■■□□□ 1.6
COL1A2-212ENST00000497316 AGLP35573 1532 aa25.01■■□□□ 1.59
COL1A2-212ENST00000497316 MADDQ8WXG6 1647 aa24.97■■□□□ 1.59
COL1A2-212ENST00000497316 PTPRMP28827 1452 aa24.96■■□□□ 1.59
COL1A2-212ENST00000497316 FGD6Q6ZV73 1430 aa24.95■■□□□ 1.59
COL1A2-212ENST00000497316 PTPN23Q9H3S7 1636 aa24.94■■□□□ 1.58
COL1A2-212ENST00000497316 TSPY4P0CV99 314 aa24.93■■□□□ 1.58
COL1A2-212ENST00000497316 TSPY10P0CW01 314 aa24.93■■□□□ 1.58
COL1A2-212ENST00000497316 TCOF1Q13428 1488 aaKnown RBP24.93■■□□□ 1.58
COL1A2-212ENST00000497316 ADGBQ8N7X0 1667 aa24.93■■□□□ 1.58
COL1A2-212ENST00000497316 A2MP01023 1474 aa24.92■■□□□ 1.58
COL1A2-212ENST00000497316 PLXNC1O60486 1568 aa24.92■■□□□ 1.58
COL1A2-212ENST00000497316 MAST1Q9Y2H9 1570 aa24.9■■□□□ 1.58
COL1A2-212ENST00000497316 MLECQ14165 292 aa24.9■■□□□ 1.58
COL1A2-212ENST00000497316 RIMS1Q86UR5 1692 aaKnown RBP24.88■■□□□ 1.57
COL1A2-212ENST00000497316 FER1L4A9Z1Z3 1794 aa24.88■■□□□ 1.57
COL1A2-212ENST00000497316 DHX29Q7Z478 1369 aaKnown RBP24.86■■□□□ 1.57
COL1A2-212ENST00000497316 SHANK2Q9UPX8 1470 aa24.83■■□□□ 1.57
COL1A2-212ENST00000497316 ABCC5O15440 1437 aa24.83■■□□□ 1.57
COL1A2-212ENST00000497316 DNMT1P26358 1616 aaKnown RBP24.83■■□□□ 1.56
COL1A2-212ENST00000497316 CROCC2H7BZ55 1655 aa24.81■■□□□ 1.56
COL1A2-212ENST00000497316 DAPK1P53355 1430 aa24.8■■□□□ 1.56
COL1A2-212ENST00000497316 CNTLNQ9NXG0 1405 aa24.78■■□□□ 1.56
COL1A2-212ENST00000497316 PPP6R1Q9UPN7 881 aa24.77■■□□□ 1.56
COL1A2-212ENST00000497316 PLPPR3Q6T4P5 718 aa24.76■■□□□ 1.55
COL1A2-212ENST00000497316 ESF1Q9H501 851 aaKnown RBP24.75■■□□□ 1.55
COL1A2-212ENST00000497316 FAM50AQ14320 339 aaKnown RBP24.73■■□□□ 1.55
COL1A2-212ENST00000497316 PPARGC1BQ86YN6 1023 aaKnown RBP24.73■■□□□ 1.55
COL1A2-212ENST00000497316 DUOX2Q9NRD8 1548 aa24.71■■□□□ 1.55
COL1A2-212ENST00000497316 KIF3BO15066 747 aa24.71■■□□□ 1.55
COL1A2-212ENST00000497316 GGT6Q6P531 493 aa24.71■■□□□ 1.55
COL1A2-212ENST00000497316 MROH2AA6NES4 1674 aa24.71■■□□□ 1.55
COL1A2-212ENST00000497316 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.7■■□□□ 1.55
COL1A2-212ENST00000497316 EIF2AK4Q9P2K8 1649 aaKnown RBP24.69■■□□□ 1.54
COL1A2-212ENST00000497316 FAM135AQ9P2D6 1515 aa24.69■■□□□ 1.54
COL1A2-212ENST00000497316 LMTK3Q96Q04 1460 aa24.68■■□□□ 1.54
COL1A2-212ENST00000497316 ANKRD30AQ9BXX3 1397 aa24.67■■□□□ 1.54
COL1A2-212ENST00000497316 KIF15Q9NS87 1388 aa24.67■■□□□ 1.54
COL1A2-212ENST00000497316 C3P01024 1663 aa24.67■■□□□ 1.54
COL1A2-212ENST00000497316 ADGRL2O95490 1459 aa24.67■■□□□ 1.54
COL1A2-212ENST00000497316 ILDR1Q86SU0 546 aaPredicted RBP24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms