RNA–Protein interactions for RNA: ENST00000497267.5

ARHGEF3-214, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene ARHGEF3, Length 2,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-214ENST00000497267 SCAPERQ9BY12 1400 aa11.95□□□□□ -0.5
ARHGEF3-214ENST00000497267 FMN1Q68DA7 1419 aa11.93□□□□□ -0.5
ARHGEF3-214ENST00000497267 UBTFP17480 764 aaKnown RBP11.93□□□□□ -0.5
ARHGEF3-214ENST00000497267 MAGI2Q86UL8 1455 aa11.93□□□□□ -0.5
ARHGEF3-214ENST00000497267 MYO5CQ9NQX4 1742 aa11.92□□□□□ -0.5
ARHGEF3-214ENST00000497267 TROQ12816 1431 aaPredicted RBP11.91□□□□□ -0.5
ARHGEF3-214ENST00000497267 HSPA2P54652 639 aa11.91□□□□□ -0.5
ARHGEF3-214ENST00000497267 ARHGEF12Q9NZN5 1544 aa11.9□□□□□ -0.5
ARHGEF3-214ENST00000497267 FER1L4A9Z1Z3 1794 aa11.9□□□□□ -0.51
ARHGEF3-214ENST00000497267 ATP1B4Q9UN42 357 aaPredicted RBP11.89□□□□□ -0.51
ARHGEF3-214ENST00000497267 KDM5CP41229 1560 aa11.89□□□□□ -0.51
ARHGEF3-214ENST00000497267 MLECQ14165 292 aa11.89□□□□□ -0.51
ARHGEF3-214ENST00000497267 ATP10AO60312 1499 aa11.88□□□□□ -0.51
ARHGEF3-214ENST00000497267 PLPPR3Q6T4P5 718 aa11.88□□□□□ -0.51
ARHGEF3-214ENST00000497267 CDC42BPBQ9Y5S2 1711 aa11.88□□□□□ -0.51
ARHGEF3-214ENST00000497267 FBXO41Q8TF61 875 aa11.88□□□□□ -0.51
ARHGEF3-214ENST00000497267 C9orf84Q5VXU9 1444 aa11.87□□□□□ -0.51
ARHGEF3-214ENST00000497267 ARHGAP5Q13017 1502 aa11.87□□□□□ -0.51
ARHGEF3-214ENST00000497267 EFCAB2Q5VUJ9 269 aa11.86□□□□□ -0.51
ARHGEF3-214ENST00000497267 AFAP1Q8N556 730 aa11.86□□□□□ -0.51
ARHGEF3-214ENST00000497267 DIP2CQ9Y2E4 1556 aa11.86□□□□□ -0.51
ARHGEF3-214ENST00000497267 ABCA6Q8N139 1617 aa11.85□□□□□ -0.51
ARHGEF3-214ENST00000497267 ZNF518AQ6AHZ1 1483 aa11.85□□□□□ -0.51
ARHGEF3-214ENST00000497267 PREX2Q70Z35 1606 aa11.84□□□□□ -0.51
ARHGEF3-214ENST00000497267 CASKIN1Q8WXD9 1431 aa11.84□□□□□ -0.51
ARHGEF3-214ENST00000497267 TRAPPC8Q9Y2L5 1435 aa11.84□□□□□ -0.51
ARHGEF3-214ENST00000497267 ABCC1P33527 1531 aa11.84□□□□□ -0.51
ARHGEF3-214ENST00000497267 CEBPAP49715 358 aaPredicted RBP11.84□□□□□ -0.51
ARHGEF3-214ENST00000497267 CDK11AQ9UQ88 783 aaPredicted RBP11.82□□□□□ -0.52
ARHGEF3-214ENST00000497267 REREQ9P2R6 1566 aa11.82□□□□□ -0.52
ARHGEF3-214ENST00000497267 ITSN2Q9NZM3 1697 aa11.82□□□□□ -0.52
ARHGEF3-214ENST00000497267 CLIP1P30622 1438 aa11.82□□□□□ -0.52
ARHGEF3-214ENST00000497267 CDC42BPAQ5VT25 1732 aa11.82□□□□□ -0.52
ARHGEF3-214ENST00000497267 PREX1Q8TCU6 1659 aa11.81□□□□□ -0.52
ARHGEF3-214ENST00000497267 MLH3Q9UHC1 1453 aa11.81□□□□□ -0.52
ARHGEF3-214ENST00000497267 KIDINS220Q9ULH0 1771 aa11.8□□□□□ -0.52
ARHGEF3-214ENST00000497267 CCDC18Q5T9S5 1454 aa11.8□□□□□ -0.52
ARHGEF3-214ENST00000497267 STRCQ7RTU9 1775 aa11.79□□□□□ -0.52
ARHGEF3-214ENST00000497267 SAMD9LQ8IVG5 1584 aa11.78□□□□□ -0.52
ARHGEF3-214ENST00000497267 AGLP35573 1532 aa11.78□□□□□ -0.52
ARHGEF3-214ENST00000497267 FYCO1Q9BQS8 1478 aa11.78□□□□□ -0.52
ARHGEF3-214ENST00000497267 C3P01024 1663 aa11.78□□□□□ -0.52
ARHGEF3-214ENST00000497267 GPATCH8Q9UKJ3 1502 aaKnown RBP11.76□□□□□ -0.53
ARHGEF3-214ENST00000497267 SYCP2Q9BX26 1530 aa11.75□□□□□ -0.53
ARHGEF3-214ENST00000497267 CERKQ8TCT0 537 aa11.74□□□□□ -0.53
ARHGEF3-214ENST00000497267 UHRF1BP1Q6BDS2 1440 aa11.72□□□□□ -0.53
ARHGEF3-214ENST00000497267 MYT1LQ9UL68 1186 aa11.72□□□□□ -0.53
ARHGEF3-214ENST00000497267 INO80Q9ULG1 1556 aaPredicted RBP11.71□□□□□ -0.54
ARHGEF3-214ENST00000497267 HNRNPMP52272 730 aaKnown RBP eCLIP11.71□□□□□ -0.54
ARHGEF3-214ENST00000497267 PLXNC1O60486 1568 aa11.7□□□□□ -0.54
ARHGEF3-214ENST00000497267 SETD1BQ9UPS6 1966 aaKnown RBP11.7□□□□□ -0.54
ARHGEF3-214ENST00000497267 ZNF777Q9ULD5 760 aaPredicted RBP11.7□□□□□ -0.54
ARHGEF3-214ENST00000497267 ATP7AQ04656 1500 aa11.69□□□□□ -0.54
ARHGEF3-214ENST00000497267 SUPT6HQ7KZ85 1726 aaKnown RBP11.69□□□□□ -0.54
ARHGEF3-214ENST00000497267 TIAM1Q13009 1591 aa11.68□□□□□ -0.54
ARHGEF3-214ENST00000497267 KIAA1107Q9UPP5 1409 aa11.68□□□□□ -0.54
ARHGEF3-214ENST00000497267 MROH2AA6NES4 1674 aa11.67□□□□□ -0.54
ARHGEF3-214ENST00000497267 ZNF644Q9H582 1327 aaPredicted RBP11.67□□□□□ -0.54
ARHGEF3-214ENST00000497267 LTBP4Q8N2S1 1624 aa11.67□□□□□ -0.54
ARHGEF3-214ENST00000497267 SPAG9O60271 1321 aaKnown RBP11.67□□□□□ -0.54
ARHGEF3-214ENST00000497267 NCOA1Q15788 1441 aa11.66□□□□□ -0.54
ARHGEF3-214ENST00000497267 PTPRTO14522 1441 aa11.66□□□□□ -0.54
ARHGEF3-214ENST00000497267 CNTLNQ9NXG0 1405 aa11.66□□□□□ -0.54
ARHGEF3-214ENST00000497267 MBD5Q9P267 1494 aa11.66□□□□□ -0.54
ARHGEF3-214ENST00000497267 CLTCQ00610 1675 aaKnown RBP11.66□□□□□ -0.54
ARHGEF3-214ENST00000497267 ZMYM3Q14202 1370 aa11.65□□□□□ -0.54
ARHGEF3-214ENST00000497267 CCNB3Q8WWL7 1395 aa11.65□□□□□ -0.54
ARHGEF3-214ENST00000497267 A2MP01023 1474 aa11.64□□□□□ -0.55
ARHGEF3-214ENST00000497267 CFDP1Q9UEE9 299 aaPredicted RBP11.64□□□□□ -0.55
ARHGEF3-214ENST00000497267 NPATQ14207 1427 aa11.64□□□□□ -0.55
ARHGEF3-214ENST00000497267 MTUS2Q5JR59 1369 aa11.63□□□□□ -0.55
ARHGEF3-214ENST00000497267 CAMSAP1Q5T5Y3 1602 aa11.63□□□□□ -0.55
ARHGEF3-214ENST00000497267 PLEKHH2Q8IVE3 1493 aa11.63□□□□□ -0.55
ARHGEF3-214ENST00000497267 PTPRKQ15262 1439 aa11.63□□□□□ -0.55
ARHGEF3-214ENST00000497267 MYO3AQ8NEV4 1616 aa11.63□□□□□ -0.55
ARHGEF3-214ENST00000497267 EHBP1L1Q8N3D4 1523 aa11.63□□□□□ -0.55
ARHGEF3-214ENST00000497267 DMRT2Q9Y5R5 561 aa11.62□□□□□ -0.55
ARHGEF3-214ENST00000497267 ZNF142P52746 1687 aaPredicted RBP11.62□□□□□ -0.55
ARHGEF3-214ENST00000497267 ESF1Q9H501 851 aaKnown RBP11.61□□□□□ -0.55
ARHGEF3-214ENST00000497267 CEP162Q5TB80 1403 aa11.61□□□□□ -0.55
ARHGEF3-214ENST00000497267 ADGBQ8N7X0 1667 aa11.61□□□□□ -0.55
ARHGEF3-214ENST00000497267 NCKAP5LQ9HCH0 1330 aa11.59□□□□□ -0.55
ARHGEF3-214ENST00000497267 CEP170BQ9Y4F5 1589 aaPredicted RBP11.59□□□□□ -0.55
ARHGEF3-214ENST00000497267 GGT6Q6P531 493 aa11.58□□□□□ -0.56
ARHGEF3-214ENST00000497267 TCOF1Q13428 1488 aaKnown RBP11.58□□□□□ -0.56
ARHGEF3-214ENST00000497267 NCOA2Q15596 1464 aa11.58□□□□□ -0.56
ARHGEF3-214ENST00000497267 RTEL1-TNFRSF6BF6WH68 1400 aa11.57□□□□□ -0.56
ARHGEF3-214ENST00000497267 CAMSAP2Q08AD1 1489 aa11.57□□□□□ -0.56
ARHGEF3-214ENST00000497267 ZNF335Q9H4Z2 1342 aaPredicted RBP11.56□□□□□ -0.56
ARHGEF3-214ENST00000497267 PLA2R1Q13018 1463 aa11.56□□□□□ -0.56
ARHGEF3-214ENST00000497267 DHX29Q7Z478 1369 aaKnown RBP11.56□□□□□ -0.56
ARHGEF3-214ENST00000497267 ILDR2Q71H61 639 aa11.55□□□□□ -0.56
ARHGEF3-214ENST00000497267 DNMT1P26358 1616 aaKnown RBP11.55□□□□□ -0.56
ARHGEF3-214ENST00000497267 CCDC141Q6ZP82 1450 aa11.55□□□□□ -0.56
ARHGEF3-214ENST00000497267 IQSEC2Q5JU85 1478 aa11.54□□□□□ -0.56
ARHGEF3-214ENST00000497267 A2ML1A8K2U0 1454 aa11.53□□□□□ -0.56
ARHGEF3-214ENST00000497267 NEURL4Q96JN8 1562 aa11.53□□□□□ -0.56
ARHGEF3-214ENST00000497267 FBXO31Q5XUX0 539 aaPredicted RBP11.53□□□□□ -0.56
ARHGEF3-214ENST00000497267 ARHGEF5Q12774 1597 aa11.52□□□□□ -0.57
ARHGEF3-214ENST00000497267 PPP6R1Q9UPN7 881 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms