RNA–Protein interactions for RNA: ENST00000497056.6

PDCD10-218, Transcript of programmed cell death 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD10, Length 1,276 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD10-218ENST00000497056 KIF14Q15058 1648 aa13.97□□□□□ -0.17
PDCD10-218ENST00000497056 TEX14Q8IWB6 1497 aa13.97□□□□□ -0.17
PDCD10-218ENST00000497056 TROQ12816 1431 aaPredicted RBP13.97□□□□□ -0.17
PDCD10-218ENST00000497056 VPS8Q8N3P4 1428 aa13.94□□□□□ -0.18
PDCD10-218ENST00000497056 CDK11AQ9UQ88 783 aaPredicted RBP13.92□□□□□ -0.18
PDCD10-218ENST00000497056 PLCH2O75038 1416 aa13.88□□□□□ -0.19
PDCD10-218ENST00000497056 FANCAO15360 1455 aa13.87□□□□□ -0.19
PDCD10-218ENST00000497056 NEO1Q92859 1461 aa13.87□□□□□ -0.19
PDCD10-218ENST00000497056 ARAP3Q8WWN8 1544 aa13.86□□□□□ -0.19
PDCD10-218ENST00000497056 AKNAQ7Z591 1439 aa13.86□□□□□ -0.19
PDCD10-218ENST00000497056 TIAM1Q13009 1591 aa13.86□□□□□ -0.19
PDCD10-218ENST00000497056 MYO5CQ9NQX4 1742 aa13.85□□□□□ -0.19
PDCD10-218ENST00000497056 FRMPD1Q5SYB0 1578 aa13.85□□□□□ -0.19
PDCD10-218ENST00000497056 NCBP3Q53F19 620 aaKnown RBP13.85□□□□□ -0.19
PDCD10-218ENST00000497056 MTUS2Q5JR59 1369 aa13.84□□□□□ -0.19
PDCD10-218ENST00000497056 RAPGEF3O95398 923 aa13.84□□□□□ -0.19
PDCD10-218ENST00000497056 EHBP1L1Q8N3D4 1523 aa13.84□□□□□ -0.19
PDCD10-218ENST00000497056 PHLDB1Q86UU1 1377 aa13.83□□□□□ -0.2
PDCD10-218ENST00000497056 PREX2Q70Z35 1606 aa13.82□□□□□ -0.2
PDCD10-218ENST00000497056 CDC42BPBQ9Y5S2 1711 aa13.82□□□□□ -0.2
PDCD10-218ENST00000497056 ARHGAP5Q13017 1502 aa13.82□□□□□ -0.2
PDCD10-218ENST00000497056 CFAP74Q9C0B2 1584 aa13.82□□□□□ -0.2
PDCD10-218ENST00000497056 CDC42BPAQ5VT25 1732 aa13.81□□□□□ -0.2
PDCD10-218ENST00000497056 GPATCH8Q9UKJ3 1502 aaKnown RBP13.81□□□□□ -0.2
PDCD10-218ENST00000497056 KANK4Q5T7N3 995 aaPredicted RBP13.81□□□□□ -0.2
PDCD10-218ENST00000497056 ADGRL1O94910 1474 aa13.8□□□□□ -0.2
PDCD10-218ENST00000497056 EFCAB2Q5VUJ9 269 aa13.8□□□□□ -0.2
PDCD10-218ENST00000497056 DENND4BO75064 1496 aaPredicted RBP13.8□□□□□ -0.2
PDCD10-218ENST00000497056 LRRC9Q6ZRR7 1453 aa13.8□□□□□ -0.2
PDCD10-218ENST00000497056 SCAPERQ9BY12 1400 aa13.79□□□□□ -0.2
PDCD10-218ENST00000497056 RICTORQ6R327 1708 aa13.78□□□□□ -0.2
PDCD10-218ENST00000497056 MAP3K1Q13233 1512 aa13.78□□□□□ -0.2
PDCD10-218ENST00000497056 ARHGEF12Q9NZN5 1544 aa13.78□□□□□ -0.2
PDCD10-218ENST00000497056 NCOA2Q15596 1464 aa13.77□□□□□ -0.21
PDCD10-218ENST00000497056 POGZQ7Z3K3 1410 aa13.77□□□□□ -0.21
PDCD10-218ENST00000497056 CCNB3Q8WWL7 1395 aa13.77□□□□□ -0.21
PDCD10-218ENST00000497056 SUPT6HQ7KZ85 1726 aaKnown RBP13.76□□□□□ -0.21
PDCD10-218ENST00000497056 SAMD9LQ8IVG5 1584 aa13.75□□□□□ -0.21
PDCD10-218ENST00000497056 ABCC1P33527 1531 aa13.75□□□□□ -0.21
PDCD10-218ENST00000497056 NPM3O75607 178 aaKnown RBP13.74□□□□□ -0.21
PDCD10-218ENST00000497056 ZNF777Q9ULD5 760 aaPredicted RBP13.74□□□□□ -0.21
PDCD10-218ENST00000497056 TRAPPC8Q9Y2L5 1435 aa13.73□□□□□ -0.21
PDCD10-218ENST00000497056 ZMYM4Q5VZL5 1548 aa13.73□□□□□ -0.21
PDCD10-218ENST00000497056 YEATS2Q9ULM3 1422 aa13.73□□□□□ -0.21
PDCD10-218ENST00000497056 ITSN2Q9NZM3 1697 aa13.72□□□□□ -0.21
PDCD10-218ENST00000497056 ZNF644Q9H582 1327 aaPredicted RBP13.72□□□□□ -0.21
PDCD10-218ENST00000497056 AFAP1Q8N556 730 aa13.72□□□□□ -0.21
PDCD10-218ENST00000497056 CFDP1Q9UEE9 299 aaPredicted RBP13.72□□□□□ -0.21
PDCD10-218ENST00000497056 ARHGEF40Q8TER5 1519 aa13.71□□□□□ -0.21
PDCD10-218ENST00000497056 SYCP2Q9BX26 1530 aa13.71□□□□□ -0.21
PDCD10-218ENST00000497056 KDM4FA0A1W2PPD8 638 aa13.7□□□□□ -0.22
PDCD10-218ENST00000497056 HNRNPMP52272 730 aaKnown RBP eCLIP13.7□□□□□ -0.222e-6■■■■□ 23.4
PDCD10-218ENST00000497056 KDM5CP41229 1560 aa13.7□□□□□ -0.22
PDCD10-218ENST00000497056 ZFYVE16Q7Z3T8 1539 aa13.69□□□□□ -0.22
PDCD10-218ENST00000497056 ZNF518AQ6AHZ1 1483 aa13.69□□□□□ -0.22
PDCD10-218ENST00000497056 APLP2Q06481 763 aa13.69□□□□□ -0.22
PDCD10-218ENST00000497056 SIGLEC1Q9BZZ2 1709 aa13.68□□□□□ -0.22
PDCD10-218ENST00000497056 KIAA1107Q9UPP5 1409 aa13.66□□□□□ -0.22
PDCD10-218ENST00000497056 CAMSAP2Q08AD1 1489 aa13.66□□□□□ -0.22
PDCD10-218ENST00000497056 MAGI2Q86UL8 1455 aa13.66□□□□□ -0.22
PDCD10-218ENST00000497056 MBD5Q9P267 1494 aa13.66□□□□□ -0.22
PDCD10-218ENST00000497056 PLEKHH2Q8IVE3 1493 aa13.65□□□□□ -0.22
PDCD10-218ENST00000497056 HECW2Q9P2P5 1572 aa13.65□□□□□ -0.22
PDCD10-218ENST00000497056 MYOM3Q5VTT5 1437 aa13.64□□□□□ -0.23
PDCD10-218ENST00000497056 DIP2CQ9Y2E4 1556 aa13.64□□□□□ -0.23
PDCD10-218ENST00000497056 ABCA6Q8N139 1617 aa13.64□□□□□ -0.23
PDCD10-218ENST00000497056 MLH3Q9UHC1 1453 aa13.63□□□□□ -0.23
PDCD10-218ENST00000497056 PPARGC1BQ86YN6 1023 aaKnown RBP13.63□□□□□ -0.23
PDCD10-218ENST00000497056 KIDINS220Q9ULH0 1771 aa13.63□□□□□ -0.23
PDCD10-218ENST00000497056 ATP10AO60312 1499 aa13.61□□□□□ -0.23
PDCD10-218ENST00000497056 MYT1LQ9UL68 1186 aa13.61□□□□□ -0.23
PDCD10-218ENST00000497056 C9orf84Q5VXU9 1444 aa13.6□□□□□ -0.23
PDCD10-218ENST00000497056 MIA2Q96PC5 1412 aa13.6□□□□□ -0.23
PDCD10-218ENST00000497056 INO80Q9ULG1 1556 aaPredicted RBP13.6□□□□□ -0.23
PDCD10-218ENST00000497056 SPAG9O60271 1321 aaKnown RBP13.6□□□□□ -0.23
PDCD10-218ENST00000497056 ARID4BQ4LE39 1312 aaPredicted RBP13.6□□□□□ -0.23
PDCD10-218ENST00000497056 ATP7AQ04656 1500 aa13.59□□□□□ -0.23
PDCD10-218ENST00000497056 BCORL1Q5H9F3 1711 aa13.59□□□□□ -0.23
PDCD10-218ENST00000497056 FGD6Q6ZV73 1430 aa13.58□□□□□ -0.24
PDCD10-218ENST00000497056 CCDC141Q6ZP82 1450 aa13.58□□□□□ -0.24
PDCD10-218ENST00000497056 PTPN23Q9H3S7 1636 aa13.57□□□□□ -0.24
PDCD10-218ENST00000497056 ADAMTSL3P82987 1691 aa13.57□□□□□ -0.24
PDCD10-218ENST00000497056 ARHGEF5Q12774 1597 aa13.57□□□□□ -0.24
PDCD10-218ENST00000497056 MLECQ14165 292 aa13.56□□□□□ -0.24
PDCD10-218ENST00000497056 TCOF1Q13428 1488 aaKnown RBP13.55□□□□□ -0.24
PDCD10-218ENST00000497056 REREQ9P2R6 1566 aa13.55□□□□□ -0.24
PDCD10-218ENST00000497056 MADDQ8WXG6 1647 aa13.54□□□□□ -0.24
PDCD10-218ENST00000497056 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.54□□□□□ -0.24
PDCD10-218ENST00000497056 RTEL1-TNFRSF6BF6WH68 1400 aa13.53□□□□□ -0.24
PDCD10-218ENST00000497056 ABCC5O15440 1437 aa13.53□□□□□ -0.24
PDCD10-218ENST00000497056 A2MP01023 1474 aa13.52□□□□□ -0.25
PDCD10-218ENST00000497056 AGLP35573 1532 aa13.52□□□□□ -0.25
PDCD10-218ENST00000497056 PLXNC1O60486 1568 aa13.52□□□□□ -0.25
PDCD10-218ENST00000497056 ADGBQ8N7X0 1667 aa13.51□□□□□ -0.25
PDCD10-218ENST00000497056 RIMS1Q86UR5 1692 aaKnown RBP13.5□□□□□ -0.25
PDCD10-218ENST00000497056 MAST1Q9Y2H9 1570 aa13.5□□□□□ -0.25
PDCD10-218ENST00000497056 RSPH4AQ5TD94 716 aa13.5□□□□□ -0.25
PDCD10-218ENST00000497056 PTPRMP28827 1452 aa13.49□□□□□ -0.25
PDCD10-218ENST00000497056 DAPK1P53355 1430 aa13.49□□□□□ -0.25
PDCD10-218ENST00000497056 CROCC2H7BZ55 1655 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms