RNA–Protein interactions for RNA: ENST00000496843.1

PALMD-202, Transcript of palmdelphin, humanhuman

TSL 1 (best)

Gene PALMD, Length 5,294 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALMD-202ENST00000496843 PRM3Q9NNZ6 103 aa6.87□□□□□ -1.31
PALMD-202ENST00000496843 TPM4P67936 248 aa6.87□□□□□ -1.31
PALMD-202ENST00000496843 CCDC70Q6NSX1 233 aa6.87□□□□□ -1.31
PALMD-202ENST00000496843 SALL2Q9Y467 1007 aaPredicted RBP6.87□□□□□ -1.31
PALMD-202ENST00000496843 ZRSR2Q15696 482 aaKnown RBP6.87□□□□□ -1.31
PALMD-202ENST00000496843 ARGLU1Q9NWB6 273 aaPredicted RBP6.86□□□□□ -1.31
PALMD-202ENST00000496843 PES1O00541 588 aaKnown RBP6.86□□□□□ -1.31
PALMD-202ENST00000496843 FAM43AQ8N2R8 423 aa6.86□□□□□ -1.31
PALMD-202ENST00000496843 GPATCH11Q8N954 259 aa6.86□□□□□ -1.31
PALMD-202ENST00000496843 RBM25P49756 843 aaKnown RBP6.86□□□□□ -1.31
PALMD-202ENST00000496843 HSP90B2PQ58FF3 399 aa6.85□□□□□ -1.31
PALMD-202ENST00000496843 GOLGA6L19H0YKK7 550 aa6.85□□□□□ -1.31
PALMD-202ENST00000496843 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.85□□□□□ -1.31
PALMD-202ENST00000496843 GNL2Q13823 731 aaKnown RBP6.85□□□□□ -1.31
PALMD-202ENST00000496843 LEKR1Q6ZMV7 388 aa6.85□□□□□ -1.31
PALMD-202ENST00000496843 AK7Q96M32 723 aa6.85□□□□□ -1.31
PALMD-202ENST00000496843 SUDS3Q9H7L9 328 aaPredicted RBP6.85□□□□□ -1.31
PALMD-202ENST00000496843 GOLGA6L10A0A0M3HER8 536 aa6.85□□□□□ -1.31
PALMD-202ENST00000496843 GOLGA6L10A6NI86 522 aa6.85□□□□□ -1.31
PALMD-202ENST00000496843 HMGB1P1B2RPK0 211 aaPredicted RBP6.85□□□□□ -1.31
PALMD-202ENST00000496843 GSE1Q14687 1217 aa6.85□□□□□ -1.31
PALMD-202ENST00000496843 TNNT1P13805 278 aa6.84□□□□□ -1.31
PALMD-202ENST00000496843 AXDND1Q5T1B0 1012 aaPredicted RBP6.84□□□□□ -1.31
PALMD-202ENST00000496843 CCAR2Q8N163 923 aaKnown RBP6.84□□□□□ -1.31
PALMD-202ENST00000496843 FTSJ3Q8IY81 847 aaKnown RBP6.84□□□□□ -1.31
PALMD-202ENST00000496843 SUPT16HQ9Y5B9 1047 aaKnown RBP6.83□□□□□ -1.32
PALMD-202ENST00000496843 MNS1Q8NEH6 495 aa6.83□□□□□ -1.32
PALMD-202ENST00000496843 ZMYND15Q9H091 742 aa6.83□□□□□ -1.32
PALMD-202ENST00000496843 HMGN5P82970 282 aaKnown RBP6.83□□□□□ -1.32
PALMD-202ENST00000496843 GOLGA6L7A0A1B0GV03 622 aa6.82□□□□□ -1.32
PALMD-202ENST00000496843 PHF14O94880 888 aa6.82□□□□□ -1.32
PALMD-202ENST00000496843 TMC1Q8TDI8 760 aa6.82□□□□□ -1.32
PALMD-202ENST00000496843 FAM193AP78312 1265 aa6.82□□□□□ -1.32
PALMD-202ENST00000496843 IPO4Q8TEX9 1081 aaKnown RBP6.82□□□□□ -1.32
PALMD-202ENST00000496843 RUFY1Q96T51 708 aa6.82□□□□□ -1.32
PALMD-202ENST00000496843 RBM28Q9NW13 759 aaKnown RBP6.82□□□□□ -1.32
PALMD-202ENST00000496843 PPP1R1BQ9UD71 204 aaPredicted RBP6.82□□□□□ -1.32
PALMD-202ENST00000496843 CHIC1Q5VXU3 224 aa6.81□□□□□ -1.32
PALMD-202ENST00000496843 RASSF8Q8NHQ8 419 aa6.81□□□□□ -1.32
PALMD-202ENST00000496843 CEP89Q96ST8 783 aa6.81□□□□□ -1.32
PALMD-202ENST00000496843 KIF3AQ9Y496 699 aa6.81□□□□□ -1.32
PALMD-202ENST00000496843 KIAA0754O94854 1291 aa6.81□□□□□ -1.32
PALMD-202ENST00000496843 E9PSI1 815 aa6.8□□□□□ -1.32
PALMD-202ENST00000496843 DZIP1Q86YF9 867 aaKnown RBP6.8□□□□□ -1.32
PALMD-202ENST00000496843 CHMP4AQ9BY43 222 aa6.8□□□□□ -1.32
PALMD-202ENST00000496843 TCERG1O14776 1098 aaKnown RBP6.8□□□□□ -1.32
PALMD-202ENST00000496843 TDO2P48775 406 aa6.8□□□□□ -1.32
PALMD-202ENST00000496843 DIAPH3Q9NSV4 1193 aa6.8□□□□□ -1.32
PALMD-202ENST00000496843 BCL11BQ9C0K0 894 aaPredicted RBP6.8□□□□□ -1.32
PALMD-202ENST00000496843 RGS3P49796 1198 aa6.8□□□□□ -1.32
PALMD-202ENST00000496843 RALBP1Q15311 655 aa6.79□□□□□ -1.32
PALMD-202ENST00000496843 IPO9Q96P70 1041 aaKnown RBP6.79□□□□□ -1.32
PALMD-202ENST00000496843 FGD1P98174 961 aa6.79□□□□□ -1.32
PALMD-202ENST00000496843 DDX10Q13206 875 aaKnown RBP6.79□□□□□ -1.32
PALMD-202ENST00000496843 CCDC34Q96HJ3 373 aa6.79□□□□□ -1.32
PALMD-202ENST00000496843 MRS2Q9HD23 443 aa6.79□□□□□ -1.32
PALMD-202ENST00000496843 RBM10P98175 930 aaKnown RBP6.78□□□□□ -1.32
PALMD-202ENST00000496843 NAP1L2Q9ULW6 460 aaPredicted RBP6.78□□□□□ -1.32
PALMD-202ENST00000496843 CLSTN1O94985 981 aa6.78□□□□□ -1.32
PALMD-202ENST00000496843 ZNF592Q92610 1267 aa6.78□□□□□ -1.32
PALMD-202ENST00000496843 ERCC4Q92889 916 aaPredicted RBP6.78□□□□□ -1.32
PALMD-202ENST00000496843 MPHOSPH10O00566 681 aaKnown RBP6.78□□□□□ -1.32
PALMD-202ENST00000496843 GTF2A1P52655 376 aaPredicted RBP6.78□□□□□ -1.32
PALMD-202ENST00000496843 MIER1Q8N108 512 aa6.78□□□□□ -1.32
PALMD-202ENST00000496843 SPRYD3Q8NCJ5 442 aa6.78□□□□□ -1.32
PALMD-202ENST00000496843 MRVI1Q9Y6F6 885 aa6.78□□□□□ -1.32
PALMD-202ENST00000496843 CCP110O43303 1012 aa6.78□□□□□ -1.32
PALMD-202ENST00000496843 NAP1L1P55209 391 aaKnown RBP6.78□□□□□ -1.32
PALMD-202ENST00000496843 CAGE1Q8TC20 777 aa6.78□□□□□ -1.32
PALMD-202ENST00000496843 ARID4AP29374 1257 aaPredicted RBP6.77□□□□□ -1.33
PALMD-202ENST00000496843 SARNPP82979 210 aaKnown RBP6.77□□□□□ -1.33
PALMD-202ENST00000496843 CALCOCO1Q9P1Z2 691 aa6.77□□□□□ -1.33
PALMD-202ENST00000496843 R3HCC1Q9Y3T6 440 aaKnown RBP6.77□□□□□ -1.33
PALMD-202ENST00000496843 CLASRPQ8N2M8 674 aaKnown RBP6.77□□□□□ -1.33
PALMD-202ENST00000496843 CFAP44Q96MT7 982 aa6.77□□□□□ -1.33
PALMD-202ENST00000496843 TSHZ2Q9NRE2 1034 aa6.77□□□□□ -1.33
PALMD-202ENST00000496843 LMOD3Q0VAK6 560 aa6.77□□□□□ -1.33
PALMD-202ENST00000496843 ENOX2Q16206 610 aaKnown RBP6.77□□□□□ -1.33
PALMD-202ENST00000496843 LOC105371045A0A1W2PR82 267 aa6.77□□□□□ -1.33
PALMD-202ENST00000496843 PLCD3Q8N3E9 789 aa6.77□□□□□ -1.33
PALMD-202ENST00000496843 DNAJC2Q99543 621 aaKnown RBP6.77□□□□□ -1.33
PALMD-202ENST00000496843 TICAM2Q86XR7 235 aa6.76□□□□□ -1.33
PALMD-202ENST00000496843 TCHPQ9BT92 498 aa6.76□□□□□ -1.33
PALMD-202ENST00000496843 SLKQ9H2G2 1235 aaPredicted RBP6.76□□□□□ -1.33
PALMD-202ENST00000496843 FBXO3Q9UK99 471 aa6.76□□□□□ -1.33
PALMD-202ENST00000496843 SEPT6Q14141 434 aa6.76□□□□□ -1.33
PALMD-202ENST00000496843 DDX11L8A8MPP1 907 aa6.76□□□□□ -1.33
PALMD-202ENST00000496843 FAM50AQ14320 339 aaKnown RBP6.76□□□□□ -1.33
PALMD-202ENST00000496843 MCCP23508 829 aa6.75□□□□□ -1.33
PALMD-202ENST00000496843 SPATA24Q86W54 205 aa6.75□□□□□ -1.33
PALMD-202ENST00000496843 CT47A1Q5JQC4 288 aaPredicted RBP6.75□□□□□ -1.33
PALMD-202ENST00000496843 SEPT14Q6ZU15 432 aa6.75□□□□□ -1.33
PALMD-202ENST00000496843 WDR66Q8TBY9 1149 aa6.75□□□□□ -1.33
PALMD-202ENST00000496843 SEPT11Q9NVA2 429 aaKnown RBP6.75□□□□□ -1.33
PALMD-202ENST00000496843 CPSF2Q9P2I0 782 aaKnown RBP6.75□□□□□ -1.33
PALMD-202ENST00000496843 CCDC175P0C221 793 aa6.75□□□□□ -1.33
PALMD-202ENST00000496843 CCAR1Q8IX12 1150 aaKnown RBP6.75□□□□□ -1.33
PALMD-202ENST00000496843 CGNQ9P2M7 1197 aaKnown RBP6.75□□□□□ -1.33
PALMD-202ENST00000496843 SKOR2Q2VWA4 1001 aaPredicted RBP6.74□□□□□ -1.33
PALMD-202ENST00000496843 FAM114A1Q8IWE2 563 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms