RNA–Protein interactions for RNA: ENST00000496728.1

TSC22D4-206, Transcript of TSC22 domain family member 4, humanhuman

TSL 3

Gene TSC22D4, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4-206ENST00000496728 KANK4Q5T7N3 995 aaPredicted RBP31.65■■■□□ 2.66
TSC22D4-206ENST00000496728 RAPGEF3O95398 923 aa31.62■■■□□ 2.65
TSC22D4-206ENST00000496728 GPATCH8Q9UKJ3 1502 aaKnown RBP31.6■■■□□ 2.65
TSC22D4-206ENST00000496728 DENND4BO75064 1496 aaPredicted RBP31.59■■■□□ 2.65
TSC22D4-206ENST00000496728 CFDP1Q9UEE9 299 aaPredicted RBP31.59■■■□□ 2.65
TSC22D4-206ENST00000496728 ADGRL1O94910 1474 aa31.59■■■□□ 2.65
TSC22D4-206ENST00000496728 SCAPERQ9BY12 1400 aa31.58■■■□□ 2.65
TSC22D4-206ENST00000496728 ZNF777Q9ULD5 760 aaPredicted RBP31.57■■■□□ 2.64
TSC22D4-206ENST00000496728 NCOA2Q15596 1464 aa31.57■■■□□ 2.64
TSC22D4-206ENST00000496728 PREX2Q70Z35 1606 aa31.56■■■□□ 2.64
TSC22D4-206ENST00000496728 SUPT6HQ7KZ85 1726 aaKnown RBP31.54■■■□□ 2.64
TSC22D4-206ENST00000496728 CDC42BPBQ9Y5S2 1711 aa31.52■■■□□ 2.64
TSC22D4-206ENST00000496728 CDC42BPAQ5VT25 1732 aa31.52■■■□□ 2.64
TSC22D4-206ENST00000496728 POGZQ7Z3K3 1410 aa31.45■■■□□ 2.63
TSC22D4-206ENST00000496728 AFAP1Q8N556 730 aa31.42■■■□□ 2.62
TSC22D4-206ENST00000496728 FRMPD1Q5SYB0 1578 aa31.42■■■□□ 2.62
TSC22D4-206ENST00000496728 PLEKHH2Q8IVE3 1493 aa31.41■■■□□ 2.62
TSC22D4-206ENST00000496728 ITSN2Q9NZM3 1697 aa31.41■■■□□ 2.62
TSC22D4-206ENST00000496728 ZNF518AQ6AHZ1 1483 aa31.4■■■□□ 2.62
TSC22D4-206ENST00000496728 ABCC1P33527 1531 aa31.39■■■□□ 2.62
TSC22D4-206ENST00000496728 HNRNPMP52272 730 aaKnown RBP eCLIP31.39■■■□□ 2.625e-8■□□□□ 11
TSC22D4-206ENST00000496728 ZNF644Q9H582 1327 aaPredicted RBP31.39■■■□□ 2.62
TSC22D4-206ENST00000496728 RICTORQ6R327 1708 aa31.38■■■□□ 2.61
TSC22D4-206ENST00000496728 KIAA1107Q9UPP5 1409 aa31.38■■■□□ 2.61
TSC22D4-206ENST00000496728 SAMD9LQ8IVG5 1584 aa31.38■■■□□ 2.61
TSC22D4-206ENST00000496728 ARHGEF12Q9NZN5 1544 aa31.37■■■□□ 2.61
TSC22D4-206ENST00000496728 MYT1LQ9UL68 1186 aa31.36■■■□□ 2.61
TSC22D4-206ENST00000496728 TRAPPC8Q9Y2L5 1435 aa31.35■■■□□ 2.61
TSC22D4-206ENST00000496728 MAGI2Q86UL8 1455 aa31.34■■■□□ 2.61
TSC22D4-206ENST00000496728 MYOM3Q5VTT5 1437 aa31.34■■■□□ 2.61
TSC22D4-206ENST00000496728 ZMYM4Q5VZL5 1548 aa31.34■■■□□ 2.61
TSC22D4-206ENST00000496728 SYCP2Q9BX26 1530 aa31.31■■■□□ 2.6
TSC22D4-206ENST00000496728 MIA2Q96PC5 1412 aa31.31■■■□□ 2.6
TSC22D4-206ENST00000496728 ZFYVE16Q7Z3T8 1539 aa31.27■■■□□ 2.6
TSC22D4-206ENST00000496728 KDM5CP41229 1560 aa31.26■■■□□ 2.6
TSC22D4-206ENST00000496728 YEATS2Q9ULM3 1422 aa31.26■■■□□ 2.6
TSC22D4-206ENST00000496728 RSPH4AQ5TD94 716 aa31.26■■■□□ 2.59
TSC22D4-206ENST00000496728 CAMSAP2Q08AD1 1489 aa31.26■■■□□ 2.59
TSC22D4-206ENST00000496728 SPAG9O60271 1321 aaKnown RBP31.25■■■□□ 2.59
TSC22D4-206ENST00000496728 PPARGC1BQ86YN6 1023 aaKnown RBP31.25■■■□□ 2.59
TSC22D4-206ENST00000496728 MBD5Q9P267 1494 aa31.23■■■□□ 2.59
TSC22D4-206ENST00000496728 MLH3Q9UHC1 1453 aa31.23■■■□□ 2.59
TSC22D4-206ENST00000496728 ARHGEF40Q8TER5 1519 aa31.23■■■□□ 2.59
TSC22D4-206ENST00000496728 ARID4BQ4LE39 1312 aaPredicted RBP31.2■■■□□ 2.58
TSC22D4-206ENST00000496728 HECW2Q9P2P5 1572 aa31.18■■■□□ 2.58
TSC22D4-206ENST00000496728 FGD6Q6ZV73 1430 aa31.18■■■□□ 2.58
TSC22D4-206ENST00000496728 ATP10AO60312 1499 aa31.17■■■□□ 2.58
TSC22D4-206ENST00000496728 TSPY4P0CV99 314 aa31.15■■■□□ 2.58
TSC22D4-206ENST00000496728 TSPY10P0CW01 314 aa31.15■■■□□ 2.58
TSC22D4-206ENST00000496728 CCDC141Q6ZP82 1450 aa31.14■■■□□ 2.58
TSC22D4-206ENST00000496728 C9orf84Q5VXU9 1444 aa31.13■■■□□ 2.57
TSC22D4-206ENST00000496728 KDM4FA0A1W2PPD8 638 aa31.12■■■□□ 2.57
TSC22D4-206ENST00000496728 PTPN23Q9H3S7 1636 aa31.09■■■□□ 2.57
TSC22D4-206ENST00000496728 ARHGEF5Q12774 1597 aa31.09■■■□□ 2.57
TSC22D4-206ENST00000496728 ATP7AQ04656 1500 aa31.08■■■□□ 2.57
TSC22D4-206ENST00000496728 RTEL1-TNFRSF6BF6WH68 1400 aa31.07■■■□□ 2.57
TSC22D4-206ENST00000496728 FAM50AQ14320 339 aaKnown RBP31.07■■■□□ 2.56
TSC22D4-206ENST00000496728 TCOF1Q13428 1488 aaKnown RBP31.07■■■□□ 2.56
TSC22D4-206ENST00000496728 DIP2CQ9Y2E4 1556 aa31.06■■■□□ 2.56
TSC22D4-206ENST00000496728 KIDINS220Q9ULH0 1771 aa31.06■■■□□ 2.56
TSC22D4-206ENST00000496728 ABCA6Q8N139 1617 aa31.03■■■□□ 2.56
TSC22D4-206ENST00000496728 AEBP2Q6ZN18 517 aaPredicted RBP31.03■■■□□ 2.56
TSC22D4-206ENST00000496728 INO80Q9ULG1 1556 aaPredicted RBP31.02■■■□□ 2.56
TSC22D4-206ENST00000496728 MLECQ14165 292 aa30.99■■■□□ 2.55
TSC22D4-206ENST00000496728 REREQ9P2R6 1566 aa30.98■■■□□ 2.55
TSC22D4-206ENST00000496728 ABCC5O15440 1437 aa30.98■■■□□ 2.55
TSC22D4-206ENST00000496728 A2MP01023 1474 aa30.95■■■□□ 2.55
TSC22D4-206ENST00000496728 DAPK1P53355 1430 aa30.95■■■□□ 2.54
TSC22D4-206ENST00000496728 AGLP35573 1532 aa30.93■■■□□ 2.54
TSC22D4-206ENST00000496728 DHX29Q7Z478 1369 aaKnown RBP30.92■■■□□ 2.54
TSC22D4-206ENST00000496728 BCORL1Q5H9F3 1711 aa30.91■■■□□ 2.54
TSC22D4-206ENST00000496728 SIGLEC1Q9BZZ2 1709 aa30.91■■■□□ 2.54
TSC22D4-206ENST00000496728 MAST1Q9Y2H9 1570 aa30.91■■■□□ 2.54
TSC22D4-206ENST00000496728 SHANK2Q9UPX8 1470 aa30.89■■■□□ 2.54
TSC22D4-206ENST00000496728 DNMT1P26358 1616 aaKnown RBP30.89■■■□□ 2.54
TSC22D4-206ENST00000496728 CHIC2Q9UKJ5 165 aa30.88■■■□□ 2.53
TSC22D4-206ENST00000496728 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.86■■■□□ 2.532e-6■■■□□ 18
TSC22D4-206ENST00000496728 ADAMTSL3P82987 1691 aa30.86■■■□□ 2.53
TSC22D4-206ENST00000496728 ADGBQ8N7X0 1667 aa30.86■■■□□ 2.53
TSC22D4-206ENST00000496728 RRP7BPQ9NSQ0 103 aa30.84■■■□□ 2.53
TSC22D4-206ENST00000496728 PLXNC1O60486 1568 aa30.83■■■□□ 2.53
TSC22D4-206ENST00000496728 ANKRD30AQ9BXX3 1397 aa30.82■■■□□ 2.52
TSC22D4-206ENST00000496728 ESF1Q9H501 851 aaKnown RBP30.82■■■□□ 2.52
TSC22D4-206ENST00000496728 RRBP1Q9P2E9 1410 aaKnown RBP30.81■■■□□ 2.52
TSC22D4-206ENST00000496728 KIF3BO15066 747 aa30.81■■■□□ 2.52
TSC22D4-206ENST00000496728 GGT6Q6P531 493 aa30.8■■■□□ 2.52
TSC22D4-206ENST00000496728 CROCC2H7BZ55 1655 aa30.8■■■□□ 2.52
TSC22D4-206ENST00000496728 KIF15Q9NS87 1388 aa30.79■■■□□ 2.52
TSC22D4-206ENST00000496728 ITGAEP38570 1179 aa30.79■■■□□ 2.52
TSC22D4-206ENST00000496728 MADDQ8WXG6 1647 aa30.78■■■□□ 2.52
TSC22D4-206ENST00000496728 PTPRMP28827 1452 aa30.76■■■□□ 2.51
TSC22D4-206ENST00000496728 NCOA1Q15788 1441 aa30.75■■■□□ 2.51
TSC22D4-206ENST00000496728 PPP6R1Q9UPN7 881 aa30.74■■■□□ 2.51
TSC22D4-206ENST00000496728 DUOX2Q9NRD8 1548 aa30.73■■■□□ 2.51
TSC22D4-206ENST00000496728 ADGRL2O95490 1459 aa30.72■■■□□ 2.51
TSC22D4-206ENST00000496728 PTPRKQ15262 1439 aa30.72■■■□□ 2.51
TSC22D4-206ENST00000496728 PLPPR3Q6T4P5 718 aa30.69■■■□□ 2.5
TSC22D4-206ENST00000496728 RIMS1Q86UR5 1692 aaKnown RBP30.68■■■□□ 2.5
TSC22D4-206ENST00000496728 CNTLNQ9NXG0 1405 aa30.68■■■□□ 2.5
TSC22D4-206ENST00000496728 FER1L4A9Z1Z3 1794 aa30.67■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms