RNA–Protein interactions for RNA: ENST00000496677.5

CLDN12-213, Transcript of claudin 12, humanhuman

TSL 1 (best)

Gene CLDN12, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-213ENST00000496677 POGZQ7Z3K3 1410 aa20.03■□□□□ 0.8
CLDN12-213ENST00000496677 ARHGEF40Q8TER5 1519 aa20.03■□□□□ 0.8
CLDN12-213ENST00000496677 MAGI2Q86UL8 1455 aa20.02■□□□□ 0.8
CLDN12-213ENST00000496677 ADAMTSL3P82987 1691 aa20.02■□□□□ 0.8
CLDN12-213ENST00000496677 YEATS2Q9ULM3 1422 aa20.02■□□□□ 0.79
CLDN12-213ENST00000496677 ARHGAP5Q13017 1502 aa19.98■□□□□ 0.79
CLDN12-213ENST00000496677 CEP162Q5TB80 1403 aa19.98■□□□□ 0.79
CLDN12-213ENST00000496677 CDC42BPBQ9Y5S2 1711 aa19.98■□□□□ 0.79
CLDN12-213ENST00000496677 ZFYVE16Q7Z3T8 1539 aa19.97■□□□□ 0.79
CLDN12-213ENST00000496677 BCORL1Q5H9F3 1711 aa19.97■□□□□ 0.79
CLDN12-213ENST00000496677 FOXD1Q16676 465 aa19.97■□□□□ 0.79
CLDN12-213ENST00000496677 ARID4BQ4LE39 1312 aaPredicted RBP19.96■□□□□ 0.79
CLDN12-213ENST00000496677 AFAP1Q8N556 730 aa19.95■□□□□ 0.78
CLDN12-213ENST00000496677 SIGLEC1Q9BZZ2 1709 aa19.95■□□□□ 0.78
CLDN12-213ENST00000496677 PREX2Q70Z35 1606 aa19.94■□□□□ 0.78
CLDN12-213ENST00000496677 LOC105371045A0A1W2PR82 267 aa19.94■□□□□ 0.78
CLDN12-213ENST00000496677 PTPRMP28827 1452 aa19.93■□□□□ 0.78
CLDN12-213ENST00000496677 ARHGEF12Q9NZN5 1544 aa19.93■□□□□ 0.78
CLDN12-213ENST00000496677 ZNF518AQ6AHZ1 1483 aa19.92■□□□□ 0.78
CLDN12-213ENST00000496677 KDM5CP41229 1560 aa19.92■□□□□ 0.78
CLDN12-213ENST00000496677 ATP10AO60312 1499 aa19.92■□□□□ 0.78
CLDN12-213ENST00000496677 CDC42BPAQ5VT25 1732 aa19.91■□□□□ 0.78
CLDN12-213ENST00000496677 GPATCH8Q9UKJ3 1502 aaKnown RBP19.91■□□□□ 0.78
CLDN12-213ENST00000496677 HECW2Q9P2P5 1572 aa19.9■□□□□ 0.78
CLDN12-213ENST00000496677 MADDQ8WXG6 1647 aa19.89■□□□□ 0.77
CLDN12-213ENST00000496677 TRAPPC8Q9Y2L5 1435 aa19.89■□□□□ 0.77
CLDN12-213ENST00000496677 ABCC1P33527 1531 aa19.88■□□□□ 0.77
CLDN12-213ENST00000496677 MLH3Q9UHC1 1453 aa19.87■□□□□ 0.77
CLDN12-213ENST00000496677 C9orf84Q5VXU9 1444 aa19.86■□□□□ 0.77
CLDN12-213ENST00000496677 MTUS2Q5JR59 1369 aa19.85■□□□□ 0.77
CLDN12-213ENST00000496677 ITSN2Q9NZM3 1697 aa19.84■□□□□ 0.77
CLDN12-213ENST00000496677 SAMD9LQ8IVG5 1584 aa19.83■□□□□ 0.76
CLDN12-213ENST00000496677 DIP2CQ9Y2E4 1556 aa19.82■□□□□ 0.76
CLDN12-213ENST00000496677 CCNB3Q8WWL7 1395 aa19.82■□□□□ 0.76
CLDN12-213ENST00000496677 RIMS1Q86UR5 1692 aaKnown RBP19.81■□□□□ 0.76
CLDN12-213ENST00000496677 REREQ9P2R6 1566 aa19.8■□□□□ 0.76
CLDN12-213ENST00000496677 KIAA1107Q9UPP5 1409 aa19.8■□□□□ 0.76
CLDN12-213ENST00000496677 MLECQ14165 292 aa19.8■□□□□ 0.76
CLDN12-213ENST00000496677 CFDP1Q9UEE9 299 aaPredicted RBP19.8■□□□□ 0.76
CLDN12-213ENST00000496677 ZNF777Q9ULD5 760 aaPredicted RBP19.8■□□□□ 0.76
CLDN12-213ENST00000496677 HNRNPMP52272 730 aaKnown RBP eCLIP19.79■□□□□ 0.76
CLDN12-213ENST00000496677 EHBP1L1Q8N3D4 1523 aa19.79■□□□□ 0.76
CLDN12-213ENST00000496677 ABCA6Q8N139 1617 aa19.78■□□□□ 0.76
CLDN12-213ENST00000496677 KIDINS220Q9ULH0 1771 aa19.78■□□□□ 0.76
CLDN12-213ENST00000496677 VPS8Q8N3P4 1428 aa19.76■□□□□ 0.75
CLDN12-213ENST00000496677 SYCP2Q9BX26 1530 aa19.76■□□□□ 0.75
CLDN12-213ENST00000496677 TIAM1Q13009 1591 aa19.76■□□□□ 0.75
CLDN12-213ENST00000496677 MYT1LQ9UL68 1186 aa19.76■□□□□ 0.75
CLDN12-213ENST00000496677 PLEKHH2Q8IVE3 1493 aa19.75■□□□□ 0.75
CLDN12-213ENST00000496677 AGLP35573 1532 aa19.75■□□□□ 0.75
CLDN12-213ENST00000496677 ZNF644Q9H582 1327 aaPredicted RBP19.75■□□□□ 0.75
CLDN12-213ENST00000496677 SPAG9O60271 1321 aaKnown RBP19.73■□□□□ 0.75
CLDN12-213ENST00000496677 LMTK3Q96Q04 1460 aa19.73■□□□□ 0.75
CLDN12-213ENST00000496677 FER1L4A9Z1Z3 1794 aa19.72■□□□□ 0.75
CLDN12-213ENST00000496677 MBD5Q9P267 1494 aa19.72■□□□□ 0.75
CLDN12-213ENST00000496677 NCOA2Q15596 1464 aa19.7■□□□□ 0.74
CLDN12-213ENST00000496677 MAP3K1Q13233 1512 aa19.68■□□□□ 0.74
CLDN12-213ENST00000496677 LRRC9Q6ZRR7 1453 aa19.67■□□□□ 0.74
CLDN12-213ENST00000496677 CEBPAP49715 358 aaPredicted RBP19.67■□□□□ 0.74
CLDN12-213ENST00000496677 INO80Q9ULG1 1556 aaPredicted RBP19.66■□□□□ 0.74
CLDN12-213ENST00000496677 SUPT6HQ7KZ85 1726 aaKnown RBP19.66■□□□□ 0.74
CLDN12-213ENST00000496677 PLPPR3Q6T4P5 718 aa19.66■□□□□ 0.74
CLDN12-213ENST00000496677 ATP7AQ04656 1500 aa19.66■□□□□ 0.74
CLDN12-213ENST00000496677 KANK4Q5T7N3 995 aaPredicted RBP19.65■□□□□ 0.74
CLDN12-213ENST00000496677 PLXNC1O60486 1568 aa19.61■□□□□ 0.73
CLDN12-213ENST00000496677 A2MP01023 1474 aa19.61■□□□□ 0.73
CLDN12-213ENST00000496677 RTEL1-TNFRSF6BF6WH68 1400 aa19.61■□□□□ 0.73
CLDN12-213ENST00000496677 HSPA2P54652 639 aa19.61■□□□□ 0.73
CLDN12-213ENST00000496677 CAMSAP2Q08AD1 1489 aa19.6■□□□□ 0.73
CLDN12-213ENST00000496677 RSPH4AQ5TD94 716 aa19.59■□□□□ 0.73
CLDN12-213ENST00000496677 CNTLNQ9NXG0 1405 aa19.57■□□□□ 0.72
CLDN12-213ENST00000496677 C3P01024 1663 aa19.56■□□□□ 0.72
CLDN12-213ENST00000496677 CCDC141Q6ZP82 1450 aa19.56■□□□□ 0.72
CLDN12-213ENST00000496677 SETD1BQ9UPS6 1966 aaKnown RBP19.56■□□□□ 0.72
CLDN12-213ENST00000496677 ADGBQ8N7X0 1667 aa19.55■□□□□ 0.72
CLDN12-213ENST00000496677 DHX29Q7Z478 1369 aaKnown RBP19.55■□□□□ 0.72
CLDN12-213ENST00000496677 ESF1Q9H501 851 aaKnown RBP19.54■□□□□ 0.72
CLDN12-213ENST00000496677 PREX1Q8TCU6 1659 aa19.54■□□□□ 0.72
CLDN12-213ENST00000496677 ARHGEF5Q12774 1597 aa19.53■□□□□ 0.72
CLDN12-213ENST00000496677 ILDR1Q86SU0 546 aaPredicted RBP19.53■□□□□ 0.72
CLDN12-213ENST00000496677 ZMYM3Q14202 1370 aa19.53■□□□□ 0.72
CLDN12-213ENST00000496677 PPP6R1Q9UPN7 881 aa19.52■□□□□ 0.72
CLDN12-213ENST00000496677 MYOM3Q5VTT5 1437 aa19.51■□□□□ 0.71
CLDN12-213ENST00000496677 MIA2Q96PC5 1412 aa19.51■□□□□ 0.71
CLDN12-213ENST00000496677 MROH2AA6NES4 1674 aa19.5■□□□□ 0.71
CLDN12-213ENST00000496677 GGT6Q6P531 493 aa19.5■□□□□ 0.71
CLDN12-213ENST00000496677 UHRF1BP1Q6BDS2 1440 aa19.49■□□□□ 0.71
CLDN12-213ENST00000496677 NPATQ14207 1427 aa19.48■□□□□ 0.71
CLDN12-213ENST00000496677 TSPY4P0CV99 314 aa19.47■□□□□ 0.71
CLDN12-213ENST00000496677 TSPY10P0CW01 314 aa19.47■□□□□ 0.71
CLDN12-213ENST00000496677 CLTCQ00610 1675 aaKnown RBP19.46■□□□□ 0.71
CLDN12-213ENST00000496677 MAST1Q9Y2H9 1570 aa19.44■□□□□ 0.7
CLDN12-213ENST00000496677 KIF3BO15066 747 aa19.44■□□□□ 0.7
CLDN12-213ENST00000496677 APLP2Q06481 763 aa19.44■□□□□ 0.7
CLDN12-213ENST00000496677 PTPRKQ15262 1439 aa19.43■□□□□ 0.7
CLDN12-213ENST00000496677 STRCQ7RTU9 1775 aa19.43■□□□□ 0.7
CLDN12-213ENST00000496677 ABCC5O15440 1437 aa19.38■□□□□ 0.69
CLDN12-213ENST00000496677 DMRT2Q9Y5R5 561 aa19.37■□□□□ 0.69
CLDN12-213ENST00000496677 FAM135AQ9P2D6 1515 aa19.36■□□□□ 0.69
CLDN12-213ENST00000496677 TCOF1Q13428 1488 aaKnown RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms