RNA–Protein interactions for RNA: ENST00000496659.1

C4A-258, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 2

Gene C4A, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-258ENST00000496659 PREX2Q70Z35 1606 aa15.26■□□□□ 0.03
C4A-258ENST00000496659 TEX14Q8IWB6 1497 aa15.26■□□□□ 0.03
C4A-258ENST00000496659 ARAP3Q8WWN8 1544 aa15.25■□□□□ 0.03
C4A-258ENST00000496659 FGD6Q6ZV73 1430 aa15.25■□□□□ 0.03
C4A-258ENST00000496659 GPATCH8Q9UKJ3 1502 aaKnown RBP15.24■□□□□ 0.03
C4A-258ENST00000496659 RRBP1Q9P2E9 1410 aaKnown RBP15.24■□□□□ 0.03
C4A-258ENST00000496659 CDC42BPAQ5VT25 1732 aa15.23■□□□□ 0.03
C4A-258ENST00000496659 ARHGAP5Q13017 1502 aa15.22■□□□□ 0.03
C4A-258ENST00000496659 CFDP1Q9UEE9 299 aaPredicted RBP15.22■□□□□ 0.03
C4A-258ENST00000496659 PLCH2O75038 1416 aa15.22■□□□□ 0.03
C4A-258ENST00000496659 CFAP74Q9C0B2 1584 aa15.22■□□□□ 0.03
C4A-258ENST00000496659 PTPN23Q9H3S7 1636 aa15.21■□□□□ 0.02
C4A-258ENST00000496659 TRIM26Q12899 539 aaPredicted RBP15.2■□□□□ 0.02
C4A-258ENST00000496659 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.19■□□□□ 0.02
C4A-258ENST00000496659 TCOF1Q13428 1488 aaKnown RBP15.19■□□□□ 0.02
C4A-258ENST00000496659 PLEKHH2Q8IVE3 1493 aa15.19■□□□□ 0.02
C4A-258ENST00000496659 CDC42BPBQ9Y5S2 1711 aa15.17■□□□□ 0.02
C4A-258ENST00000496659 CAMSAP2Q08AD1 1489 aa15.17■□□□□ 0.02
C4A-258ENST00000496659 EFCAB2Q5VUJ9 269 aa15.17■□□□□ 0.02
C4A-258ENST00000496659 FANCAO15360 1455 aa15.16■□□□□ 0.02
C4A-258ENST00000496659 ADGRL1O94910 1474 aa15.16■□□□□ 0.02
C4A-258ENST00000496659 FAM50AQ14320 339 aaKnown RBP15.15■□□□□ 0.02
C4A-258ENST00000496659 ZNF777Q9ULD5 760 aaPredicted RBP15.14■□□□□ 0.01
C4A-258ENST00000496659 SAMD9LQ8IVG5 1584 aa15.14■□□□□ 0.01
C4A-258ENST00000496659 NEO1Q92859 1461 aa15.14■□□□□ 0.01
C4A-258ENST00000496659 ABCC1P33527 1531 aa15.12■□□□□ 0.01
C4A-258ENST00000496659 KIAA1107Q9UPP5 1409 aa15.11■□□□□ 0.01
C4A-258ENST00000496659 RAPGEF3O95398 923 aa15.11■□□□□ 0.01
C4A-258ENST00000496659 ARHGEF5Q12774 1597 aa15.11■□□□□ 0.01
C4A-258ENST00000496659 DNMT1P26358 1616 aaKnown RBP15.1■□□□□ 0.01
C4A-258ENST00000496659 SYCP2Q9BX26 1530 aa15.09■□□□□ 0.01
C4A-258ENST00000496659 RSPH4AQ5TD94 716 aa15.09■□□□□ 0.01
C4A-258ENST00000496659 AKNAQ7Z591 1439 aa15.09■□□□□ 0.01
C4A-258ENST00000496659 CCDC141Q6ZP82 1450 aa15.08■□□□□ 0.01
C4A-258ENST00000496659 DAPK1P53355 1430 aa15.07■□□□□ 0
C4A-258ENST00000496659 SHANK2Q9UPX8 1470 aa15.07■□□□□ 0
C4A-258ENST00000496659 ZNF644Q9H582 1327 aaPredicted RBP15.06■□□□□ 0
C4A-258ENST00000496659 CROCC2H7BZ55 1655 aa15.06■□□□□ 0
C4A-258ENST00000496659 ZNF518AQ6AHZ1 1483 aa15.04■□□□□ -0
C4A-258ENST00000496659 MBD5Q9P267 1494 aa15.04■□□□□ -0
C4A-258ENST00000496659 SCAPERQ9BY12 1400 aa15.04■□□□□ -0
C4A-258ENST00000496659 DENND4BO75064 1496 aaPredicted RBP15.02■□□□□ -0
C4A-258ENST00000496659 ABCC5O15440 1437 aa15.02■□□□□ -0
C4A-258ENST00000496659 TSPY4P0CV99 314 aa15.02■□□□□ -0
C4A-258ENST00000496659 TSPY10P0CW01 314 aa15.02■□□□□ -0
C4A-258ENST00000496659 ITGAEP38570 1179 aa15.02■□□□□ -0
C4A-258ENST00000496659 PCGF6Q9BYE7 350 aa15.02■□□□□ -0
C4A-258ENST00000496659 ADGBQ8N7X0 1667 aa15.02□□□□□ -0.01
C4A-258ENST00000496659 MAST1Q9Y2H9 1570 aa15.02□□□□□ -0.01
C4A-258ENST00000496659 POGZQ7Z3K3 1410 aa15.01□□□□□ -0.01
C4A-258ENST00000496659 HNRNPMP52272 730 aaKnown RBP eCLIP15.01□□□□□ -0.01
C4A-258ENST00000496659 FRMPD1Q5SYB0 1578 aa15.01□□□□□ -0.01
C4A-258ENST00000496659 ARHGEF12Q9NZN5 1544 aa15.01□□□□□ -0.01
C4A-258ENST00000496659 C9orf84Q5VXU9 1444 aa15□□□□□ -0.01
C4A-258ENST00000496659 ROCK1Q13464 1354 aa14.99□□□□□ -0.01
C4A-258ENST00000496659 KDM5CP41229 1560 aa14.98□□□□□ -0.01
C4A-258ENST00000496659 ADGRL2O95490 1459 aa14.98□□□□□ -0.01
C4A-258ENST00000496659 TRAPPC8Q9Y2L5 1435 aa14.98□□□□□ -0.01
C4A-258ENST00000496659 ANKRD30AQ9BXX3 1397 aa14.98□□□□□ -0.01
C4A-258ENST00000496659 RTEL1-TNFRSF6BF6WH68 1400 aa14.97□□□□□ -0.01
C4A-258ENST00000496659 SPAG9O60271 1321 aaKnown RBP14.96□□□□□ -0.01
C4A-258ENST00000496659 PLXNC1O60486 1568 aa14.96□□□□□ -0.01
C4A-258ENST00000496659 HECW2Q9P2P5 1572 aa14.96□□□□□ -0.01
C4A-258ENST00000496659 INO80Q9ULG1 1556 aaPredicted RBP14.96□□□□□ -0.01
C4A-258ENST00000496659 ZFYVE16Q7Z3T8 1539 aa14.96□□□□□ -0.02
C4A-258ENST00000496659 RICTORQ6R327 1708 aa14.95□□□□□ -0.02
C4A-258ENST00000496659 PTPRKQ15262 1439 aa14.95□□□□□ -0.02
C4A-258ENST00000496659 ATP7AQ04656 1500 aa14.95□□□□□ -0.02
C4A-258ENST00000496659 GCC2Q8IWJ2 1684 aa14.94□□□□□ -0.02
C4A-258ENST00000496659 HFM1A2PYH4 1435 aa14.94□□□□□ -0.02
C4A-258ENST00000496659 ZMYM4Q5VZL5 1548 aa14.94□□□□□ -0.02
C4A-258ENST00000496659 MLH3Q9UHC1 1453 aa14.94□□□□□ -0.02
C4A-258ENST00000496659 CHIC2Q9UKJ5 165 aa14.93□□□□□ -0.02
C4A-258ENST00000496659 MYT1LQ9UL68 1186 aa14.93□□□□□ -0.02
C4A-258ENST00000496659 MAGI2Q86UL8 1455 aa14.93□□□□□ -0.02
C4A-258ENST00000496659 ARID4BQ4LE39 1312 aaPredicted RBP14.92□□□□□ -0.02
C4A-258ENST00000496659 AFAP1Q8N556 730 aa14.92□□□□□ -0.02
C4A-258ENST00000496659 ADAMTSL3P82987 1691 aa14.92□□□□□ -0.02
C4A-258ENST00000496659 NCOA1Q15788 1441 aa14.92□□□□□ -0.02
C4A-258ENST00000496659 YEATS2Q9ULM3 1422 aa14.91□□□□□ -0.02
C4A-258ENST00000496659 ACIN1Q9UKV3 1341 aaKnown RBP14.91□□□□□ -0.02
C4A-258ENST00000496659 KIF15Q9NS87 1388 aa14.9□□□□□ -0.02
C4A-258ENST00000496659 DUOX2Q9NRD8 1548 aa14.9□□□□□ -0.02
C4A-258ENST00000496659 SETD5Q9C0A6 1442 aa14.9□□□□□ -0.02
C4A-258ENST00000496659 NAIPQ13075 1403 aa14.89□□□□□ -0.03
C4A-258ENST00000496659 BCORL1Q5H9F3 1711 aa14.89□□□□□ -0.03
C4A-258ENST00000496659 PTPRMP28827 1452 aa14.89□□□□□ -0.03
C4A-258ENST00000496659 SIGLEC1Q9BZZ2 1709 aa14.88□□□□□ -0.03
C4A-258ENST00000496659 KIDINS220Q9ULH0 1771 aa14.88□□□□□ -0.03
C4A-258ENST00000496659 ARHGEF40Q8TER5 1519 aa14.87□□□□□ -0.03
C4A-258ENST00000496659 ERBINQ96RT1 1412 aa14.87□□□□□ -0.03
C4A-258ENST00000496659 RRP7BPQ9NSQ0 103 aa14.87□□□□□ -0.03
C4A-258ENST00000496659 MADDQ8WXG6 1647 aa14.85□□□□□ -0.03
C4A-258ENST00000496659 ANKRD50Q9ULJ7 1429 aa14.85□□□□□ -0.03
C4A-258ENST00000496659 DIP2CQ9Y2E4 1556 aa14.85□□□□□ -0.03
C4A-258ENST00000496659 ABCA6Q8N139 1617 aa14.84□□□□□ -0.03
C4A-258ENST00000496659 EIF2AK4Q9P2K8 1649 aaKnown RBP14.84□□□□□ -0.03
C4A-258ENST00000496659 RAB3GAP2Q9H2M9 1393 aa14.84□□□□□ -0.03
C4A-258ENST00000496659 A2MP01023 1474 aa14.83□□□□□ -0.03
C4A-258ENST00000496659 HRCP23327 699 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms