RNA–Protein interactions for RNA: ENST00000496404.1

CHD5-206, Transcript of chromodomain helicase DNA binding protein 5, humanhuman

TSL 2

Gene CHD5, Length 4,966 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5-206ENST00000496404 CARMIL2Q6F5E8 1435 aa18.06■□□□□ 0.48
CHD5-206ENST00000496404 A0A0G2JS52 829 aa18.05■□□□□ 0.48
CHD5-206ENST00000496404 RCAN3Q9UKA8 241 aa18.05■□□□□ 0.48
CHD5-206ENST00000496404 ANKRD30AQ9BXX3 1397 aa18.05■□□□□ 0.48
CHD5-206ENST00000496404 ROCK2O75116 1388 aaKnown RBP18.04■□□□□ 0.48
CHD5-206ENST00000496404 SRPK2P78362 688 aaKnown RBP18.04■□□□□ 0.48
CHD5-206ENST00000496404 CADPSQ9ULU8 1353 aa18.04■□□□□ 0.48
CHD5-206ENST00000496404 TSHZ2Q9NRE2 1034 aa18.02■□□□□ 0.48
CHD5-206ENST00000496404 SAFB2Q14151 953 aaKnown RBP eCLIP18.02■□□□□ 0.47
CHD5-206ENST00000496404 GGT6Q6P531 493 aa18.01■□□□□ 0.47
CHD5-206ENST00000496404 ATAD2BQ9ULI0 1458 aa17.99■□□□□ 0.47
CHD5-206ENST00000496404 HSP90AB1P08238 724 aaKnown RBP17.98■□□□□ 0.47
CHD5-206ENST00000496404 EFCAB2Q5VUJ9 269 aa17.98■□□□□ 0.47
CHD5-206ENST00000496404 PTMAP06454 111 aaKnown RBP17.98■□□□□ 0.47
CHD5-206ENST00000496404 RTN4Q9NQC3 1192 aaKnown RBP17.97■□□□□ 0.47
CHD5-206ENST00000496404 LMOD2Q6P5Q4 547 aa17.95■□□□□ 0.46
CHD5-206ENST00000496404 TCERG1O14776 1098 aaKnown RBP17.95■□□□□ 0.46
CHD5-206ENST00000496404 TPRNQ4KMQ1 711 aa17.95■□□□□ 0.46
CHD5-206ENST00000496404 HNRNPMP52272 730 aaKnown RBP eCLIP17.94■□□□□ 0.46
CHD5-206ENST00000496404 DEKP35659 375 aaKnown RBP17.94■□□□□ 0.46
CHD5-206ENST00000496404 STK26Q9P289 416 aa17.94■□□□□ 0.46
CHD5-206ENST00000496404 NLRP13Q86W25 1043 aa17.93■□□□□ 0.46
CHD5-206ENST00000496404 HSCBQ8IWL3 235 aa17.93■□□□□ 0.46
CHD5-206ENST00000496404 U2AF1L5P0DN76 240 aaPredicted RBP17.92■□□□□ 0.46
CHD5-206ENST00000496404 U2AF1Q01081 240 aaKnown RBP eCLIP17.92■□□□□ 0.46
CHD5-206ENST00000496404 HAP1P54257 671 aaPredicted RBP17.92■□□□□ 0.46
CHD5-206ENST00000496404 MLECQ14165 292 aa17.91■□□□□ 0.46
CHD5-206ENST00000496404 SMARCA4P51532 1647 aa17.91■□□□□ 0.46
CHD5-206ENST00000496404 SOX12O15370 315 aa17.9■□□□□ 0.46
CHD5-206ENST00000496404 HDGFP51858 240 aaKnown RBP17.9■□□□□ 0.46
CHD5-206ENST00000496404 CCDC18Q5T9S5 1454 aa17.9■□□□□ 0.46
CHD5-206ENST00000496404 OS9Q13438 667 aaPredicted RBP17.89■□□□□ 0.46
CHD5-206ENST00000496404 RSPH4AQ5TD94 716 aa17.89■□□□□ 0.46
CHD5-206ENST00000496404 ZRSR1Q15695 479 aaKnown RBP17.89■□□□□ 0.45
CHD5-206ENST00000496404 IPO8O15397 1037 aaKnown RBP17.89■□□□□ 0.45
CHD5-206ENST00000496404 HDGFL2Q7Z4V5 671 aaPredicted RBP17.89■□□□□ 0.45
CHD5-206ENST00000496404 PDE3BQ13370 1112 aa17.88■□□□□ 0.45
CHD5-206ENST00000496404 DNTTIP2Q5QJE6 756 aaKnown RBP17.87■□□□□ 0.45
CHD5-206ENST00000496404 KIF3BO15066 747 aa17.87■□□□□ 0.45
CHD5-206ENST00000496404 GOLGA2Q08379 1002 aa17.87■□□□□ 0.45
CHD5-206ENST00000496404 SPRYD3Q8NCJ5 442 aa17.87■□□□□ 0.45
CHD5-206ENST00000496404 ST20-MTHFSA0A0A6YYL1 179 aa17.86■□□□□ 0.45
CHD5-206ENST00000496404 RWDD1Q9H446 243 aaPredicted RBP17.86■□□□□ 0.45
CHD5-206ENST00000496404 JPH4Q96JJ6 628 aa17.85■□□□□ 0.45
CHD5-206ENST00000496404 PRKRIP1Q9H875 184 aaPredicted RBP17.85■□□□□ 0.45
CHD5-206ENST00000496404 NAP1L5Q96NT1 182 aaPredicted RBP17.84■□□□□ 0.45
CHD5-206ENST00000496404 KCNJ4P48050 445 aa17.84■□□□□ 0.45
CHD5-206ENST00000496404 PLCB2Q00722 1185 aa17.83■□□□□ 0.44
CHD5-206ENST00000496404 EIF3AQ14152 1382 aaKnown RBP17.83■□□□□ 0.44
CHD5-206ENST00000496404 ITPRIPQ8IWB1 547 aa17.81■□□□□ 0.44
CHD5-206ENST00000496404 RTF1Q92541 710 aaKnown RBP17.81■□□□□ 0.44
CHD5-206ENST00000496404 IPO9Q96P70 1041 aaKnown RBP17.81■□□□□ 0.44
CHD5-206ENST00000496404 FGD1P98174 961 aa17.81■□□□□ 0.44
CHD5-206ENST00000496404 KIF15Q9NS87 1388 aa17.81■□□□□ 0.44
CHD5-206ENST00000496404 SPAG9O60271 1321 aaKnown RBP17.8■□□□□ 0.44
CHD5-206ENST00000496404 CCDC146Q8IYE0 955 aa17.8■□□□□ 0.44
CHD5-206ENST00000496404 CFAP44Q96MT7 982 aa17.8■□□□□ 0.44
CHD5-206ENST00000496404 L1TD1Q5T7N2 865 aaKnown RBP17.8■□□□□ 0.44
CHD5-206ENST00000496404 MYBBP1AQ9BQG0 1328 aaKnown RBP17.8■□□□□ 0.44
CHD5-206ENST00000496404 CALD1Q05682 793 aaKnown RBP17.8■□□□□ 0.44
CHD5-206ENST00000496404 APBB1O00213 710 aa17.78■□□□□ 0.44
CHD5-206ENST00000496404 IGF1RP08069 1367 aa17.78■□□□□ 0.44
CHD5-206ENST00000496404 PMFBP1Q8TBY8 1022 aa17.78■□□□□ 0.44
CHD5-206ENST00000496404 SLKQ9H2G2 1235 aaPredicted RBP17.78■□□□□ 0.44
CHD5-206ENST00000496404 MCCP23508 829 aa17.77■□□□□ 0.44
CHD5-206ENST00000496404 PHLDB1Q86UU1 1377 aa17.77■□□□□ 0.44
CHD5-206ENST00000496404 PANK3Q9H999 370 aa17.77■□□□□ 0.44
CHD5-206ENST00000496404 CLUAP1Q96AJ1 413 aa17.76■□□□□ 0.43
CHD5-206ENST00000496404 SMC4Q9NTJ3 1288 aa17.76■□□□□ 0.43
CHD5-206ENST00000496404 CDK11BP21127 795 aaKnown RBP17.75■□□□□ 0.43
CHD5-206ENST00000496404 FANCD2Q9BXW9 1451 aa17.75■□□□□ 0.43
CHD5-206ENST00000496404 ZBED9Q6R2W3 1325 aa17.75■□□□□ 0.43
CHD5-206ENST00000496404 CENPJQ9HC77 1338 aaPredicted RBP17.75■□□□□ 0.43
CHD5-206ENST00000496404 TERF2IPQ9NYB0 399 aa17.74■□□□□ 0.43
CHD5-206ENST00000496404 CCDC144AA2RUR9 1427 aa17.74■□□□□ 0.43
CHD5-206ENST00000496404 USP47Q96K76 1375 aa17.72■□□□□ 0.43
CHD5-206ENST00000496404 GOLGA6L4A6NEF3 574 aa17.72■□□□□ 0.43
CHD5-206ENST00000496404 TAOK2Q9UL54 1235 aa17.72■□□□□ 0.43
CHD5-206ENST00000496404 NAP1L2Q9ULW6 460 aaPredicted RBP17.71■□□□□ 0.43
CHD5-206ENST00000496404 NUTM2DQ5VT03 806 aaPredicted RBP17.71■□□□□ 0.43
CHD5-206ENST00000496404 TRAK1Q9UPV9 953 aa17.71■□□□□ 0.43
CHD5-206ENST00000496404 WASHC2CQ9Y4E1 1318 aa17.7■□□□□ 0.42
CHD5-206ENST00000496404 GBP4Q96PP9 640 aa17.7■□□□□ 0.42
CHD5-206ENST00000496404 MFAP1P55081 439 aaKnown RBP17.69■□□□□ 0.42
CHD5-206ENST00000496404 GZF1Q9H116 711 aaPredicted RBP17.68■□□□□ 0.42
CHD5-206ENST00000496404 PLIN1O60240 522 aa17.67■□□□□ 0.42
CHD5-206ENST00000496404 EXOC6Q8TAG9 804 aa17.67■□□□□ 0.42
CHD5-206ENST00000496404 KIF21BO75037 1637 aa17.66■□□□□ 0.42
CHD5-206ENST00000496404 RRP1P56182 461 aaKnown RBP17.66■□□□□ 0.42
CHD5-206ENST00000496404 KIAA1211Q6ZU35 1233 aa17.66■□□□□ 0.42
CHD5-206ENST00000496404 RRP7AQ9Y3A4 280 aaKnown RBP17.66■□□□□ 0.42
CHD5-206ENST00000496404 MSNP26038 577 aaKnown RBP17.66■□□□□ 0.42
CHD5-206ENST00000496404 FGD6Q6ZV73 1430 aa17.65■□□□□ 0.42
CHD5-206ENST00000496404 FGD5Q6ZNL6 1462 aa17.65■□□□□ 0.42
CHD5-206ENST00000496404 PAK3O75914 559 aaPredicted RBP17.65■□□□□ 0.42
CHD5-206ENST00000496404 PDE4AP27815 886 aa17.65■□□□□ 0.42
CHD5-206ENST00000496404 STK31Q9BXU1 1019 aa17.63■□□□□ 0.41
CHD5-206ENST00000496404 CENPQQ7L2Z9 268 aaPredicted RBP17.63■□□□□ 0.41
CHD5-206ENST00000496404 GOLGA6L6A8MZA4 724 aa17.62■□□□□ 0.41
CHD5-206ENST00000496404 PTPRGP23470 1445 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms