RNA–Protein interactions for RNA: ENST00000496322.1

CLCA4-202, Transcript of chloride channel accessory 4, humanhuman

TSL 3

Gene CLCA4, Length 482 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA4-202ENST00000496322 POTEB3A0JP26 581 aa19.21■□□□□ 0.67
CLCA4-202ENST00000496322 POTEBQ6S5H4 581 aa19.21■□□□□ 0.67
CLCA4-202ENST00000496322 HOXB1P14653 301 aaPredicted RBP19.2■□□□□ 0.66
CLCA4-202ENST00000496322 RIMBP2O15034 1052 aa19.19■□□□□ 0.66
CLCA4-202ENST00000496322 HS6ST3Q8IZP7 471 aa19.08■□□□□ 0.64
CLCA4-202ENST00000496322 ZSWIM6Q9HCJ5 1215 aa19.08■□□□□ 0.64
CLCA4-202ENST00000496322 ERBB3P21860 1342 aa19.07■□□□□ 0.64
CLCA4-202ENST00000496322 PPP1R37O75864 691 aa19.06■□□□□ 0.64
CLCA4-202ENST00000496322 SPNS2Q8IVW8 549 aa19.06■□□□□ 0.64
CLCA4-202ENST00000496322 C2orf72A6NCS6 295 aa19.04■□□□□ 0.64
CLCA4-202ENST00000496322 CHGAP10645 457 aaKnown RBP19.04■□□□□ 0.64
CLCA4-202ENST00000496322 GPR153Q6NV75 609 aa19.04■□□□□ 0.64
CLCA4-202ENST00000496322 KRTAP3-3Q9BYR6 98 aa19.04■□□□□ 0.64
CLCA4-202ENST00000496322 KRTAP3-2Q9BYR7 98 aa19.04■□□□□ 0.64
CLCA4-202ENST00000496322 KIF3CO14782 793 aa19.03■□□□□ 0.64
CLCA4-202ENST00000496322 ARSIQ5FYB1 569 aa18.98■□□□□ 0.63
CLCA4-202ENST00000496322 VARS2Q5ST30 1063 aaKnown RBP18.98■□□□□ 0.63
CLCA4-202ENST00000496322 MMRN1Q13201 1228 aa18.97■□□□□ 0.63
CLCA4-202ENST00000496322 TMC2Q8TDI7 906 aa18.95■□□□□ 0.62
CLCA4-202ENST00000496322 KHSRPQ92945 711 aaKnown RBP eCLIP18.92■□□□□ 0.62
CLCA4-202ENST00000496322 NKX1-1Q15270 411 aaPredicted RBP18.85■□□□□ 0.61
CLCA4-202ENST00000496322 DNAJC5Q9H3Z4 198 aa18.82■□□□□ 0.6
CLCA4-202ENST00000496322 ZNF687Q8N1G0 1237 aa18.81■□□□□ 0.6
CLCA4-202ENST00000496322 ZNF316A6NFI3 1004 aaPredicted RBP18.79■□□□□ 0.6
CLCA4-202ENST00000496322 SLC34A2O95436 690 aa18.78■□□□□ 0.6
CLCA4-202ENST00000496322 NUDT7P0C024 238 aa18.78■□□□□ 0.6
CLCA4-202ENST00000496322 PCDHGA4Q9Y5G9 962 aa18.77■□□□□ 0.6
CLCA4-202ENST00000496322 GPHNQ9NQX3 736 aaPredicted RBP18.71■□□□□ 0.59
CLCA4-202ENST00000496322 RYDENQ9NUL5 291 aaKnown RBP18.71■□□□□ 0.59
CLCA4-202ENST00000496322 FOXK1P85037 733 aa18.69■□□□□ 0.58
CLCA4-202ENST00000496322 DCAF8L2P0C7V8 631 aa18.68■□□□□ 0.58
CLCA4-202ENST00000496322 PLPP6Q8IY26 295 aa18.68■□□□□ 0.58
CLCA4-202ENST00000496322 LHX6Q9UPM6 363 aa18.67■□□□□ 0.58
CLCA4-202ENST00000496322 DSG2Q14126 1118 aa18.65■□□□□ 0.58
CLCA4-202ENST00000496322 PTCD2Q8WV60 388 aaKnown RBP18.6■□□□□ 0.57
CLCA4-202ENST00000496322 ANKRD13DQ6ZTN6 518 aa18.57■□□□□ 0.56
CLCA4-202ENST00000496322 GTPBP6O43824 516 aaPredicted RBP18.56■□□□□ 0.56
CLCA4-202ENST00000496322 LSM11P83369 360 aaKnown RBP eCLIP18.52■□□□□ 0.56
CLCA4-202ENST00000496322 CRISPLD2Q9H0B8 497 aa18.52■□□□□ 0.56
CLCA4-202ENST00000496322 KDM4FA0A1W2PPD8 638 aa18.51■□□□□ 0.55
CLCA4-202ENST00000496322 RNF166Q96A37 237 aaPredicted RBP18.51■□□□□ 0.55
CLCA4-202ENST00000496322 MYT1LQ9UL68 1186 aa18.5■□□□□ 0.55
CLCA4-202ENST00000496322 TBC1D12O60347 775 aa18.49■□□□□ 0.55
CLCA4-202ENST00000496322 PBX2P40425 430 aa18.49■□□□□ 0.55
CLCA4-202ENST00000496322 AXIN2Q9Y2T1 843 aa18.49■□□□□ 0.55
CLCA4-202ENST00000496322 POTEEQ6S8J3 1075 aa18.48■□□□□ 0.55
CLCA4-202ENST00000496322 PSDA5PKW4 1024 aaPredicted RBP18.46■□□□□ 0.55
CLCA4-202ENST00000496322 NCKAP5LQ9HCH0 1330 aa18.46■□□□□ 0.55
CLCA4-202ENST00000496322 PPP1R15BQ5SWA1 713 aa18.45■□□□□ 0.54
CLCA4-202ENST00000496322 PDE4AP27815 886 aa18.44■□□□□ 0.54
CLCA4-202ENST00000496322 PTGER2P43116 358 aa18.43■□□□□ 0.54
CLCA4-202ENST00000496322 UPF1Q92900 1129 aaKnown RBP eCLIP18.43■□□□□ 0.54
CLCA4-202ENST00000496322 OXER1Q8TDS5 423 aa18.41■□□□□ 0.54
CLCA4-202ENST00000496322 ARHGAP33O14559 1287 aa18.36■□□□□ 0.53
CLCA4-202ENST00000496322 LARP6Q9BRS8 491 aaKnown RBP18.35■□□□□ 0.53
CLCA4-202ENST00000496322 PPP4R3BQ5MIZ7 849 aa18.34■□□□□ 0.53
CLCA4-202ENST00000496322 DDX27Q96GQ7 796 aaKnown RBP18.31■□□□□ 0.52
CLCA4-202ENST00000496322 PSEN2P49810 448 aa18.29■□□□□ 0.52
CLCA4-202ENST00000496322 ADGRD1Q6QNK2 874 aa18.27■□□□□ 0.52
CLCA4-202ENST00000496322 DMRTA1Q5VZB9 504 aa18.26■□□□□ 0.51
CLCA4-202ENST00000496322 CADPS2Q86UW7 1296 aa18.25■□□□□ 0.51
CLCA4-202ENST00000496322 MFSD10Q14728 455 aa18.24■□□□□ 0.51
CLCA4-202ENST00000496322 ZNF454Q8N9F8 522 aa18.22■□□□□ 0.51
CLCA4-202ENST00000496322 KCNK17Q96T54 332 aa18.2■□□□□ 0.5
CLCA4-202ENST00000496322 TK2O00142 265 aa18.17■□□□□ 0.5
CLCA4-202ENST00000496322 EVI5O60447 810 aa18.17■□□□□ 0.5
CLCA4-202ENST00000496322 BBXQ8WY36 941 aaPredicted RBP18.17■□□□□ 0.5
CLCA4-202ENST00000496322 KCNH8Q96L42 1107 aa18.16■□□□□ 0.5
CLCA4-202ENST00000496322 MAP3K9P80192 1104 aa18.15■□□□□ 0.5
CLCA4-202ENST00000496322 ANO8Q9HCE9 1232 aaPredicted RBP18.15■□□□□ 0.5
CLCA4-202ENST00000496322 FOSBP53539 338 aa18.14■□□□□ 0.49
CLCA4-202ENST00000496322 AMER1Q5JTC6 1135 aaPredicted RBP18.14■□□□□ 0.49
CLCA4-202ENST00000496322 EMILIN3Q9NT22 766 aa18.14■□□□□ 0.49
CLCA4-202ENST00000496322 HRO43593 1189 aa18.12■□□□□ 0.49
CLCA4-202ENST00000496322 BCL2L12Q9HB09 334 aa18.1■□□□□ 0.49
CLCA4-202ENST00000496322 JPH4Q96JJ6 628 aa18.08■□□□□ 0.48
CLCA4-202ENST00000496322 RTN4Q9NQC3 1192 aaKnown RBP18.07■□□□□ 0.48
CLCA4-202ENST00000496322 PTPREP23469 700 aa18.03■□□□□ 0.48
CLCA4-202ENST00000496322 STAC3Q96MF2 364 aa18.03■□□□□ 0.48
CLCA4-202ENST00000496322 VPS9D1Q9Y2B5 631 aa18.03■□□□□ 0.48
CLCA4-202ENST00000496322 ZDHHC16Q969W1 377 aa18.02■□□□□ 0.48
CLCA4-202ENST00000496322 ADAM33Q9BZ11 813 aa18■□□□□ 0.47
CLCA4-202ENST00000496322 SPRYD3Q8NCJ5 442 aa17.99■□□□□ 0.47
CLCA4-202ENST00000496322 HCSTQ9UBK5 93 aa17.99■□□□□ 0.47
CLCA4-202ENST00000496322 CAMK2BQ13554 666 aa17.97■□□□□ 0.47
CLCA4-202ENST00000496322 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.97■□□□□ 0.47
CLCA4-202ENST00000496322 KCTD12Q96CX2 325 aaKnown RBP17.95■□□□□ 0.46
CLCA4-202ENST00000496322 SLC4A5Q9BY07 1137 aa17.95■□□□□ 0.46
CLCA4-202ENST00000496322 PCDHGA10Q9Y5H3 936 aa17.94■□□□□ 0.46
CLCA4-202ENST00000496322 ZBED2Q9BTP6 218 aa17.93■□□□□ 0.46
CLCA4-202ENST00000496322 DPYSL4O14531 572 aa17.92■□□□□ 0.46
CLCA4-202ENST00000496322 PHF14O94880 888 aa17.87■□□□□ 0.45
CLCA4-202ENST00000496322 BHMG1C9JSJ3 638 aaPredicted RBP17.86■□□□□ 0.45
CLCA4-202ENST00000496322 TYW1BQ6NUM6 668 aa17.86■□□□□ 0.45
CLCA4-202ENST00000496322 PAXIP1Q6ZW49 1069 aaPredicted RBP17.86■□□□□ 0.45
CLCA4-202ENST00000496322 CFAP44Q96MT7 982 aa17.86■□□□□ 0.45
CLCA4-202ENST00000496322 FBXW7Q969H0 707 aa17.84■□□□□ 0.45
CLCA4-202ENST00000496322 PLA2G2EQ9NZK7 142 aa17.83■□□□□ 0.44
CLCA4-202ENST00000496322 PPP1R3GB7ZBB8 358 aa17.82■□□□□ 0.44
CLCA4-202ENST00000496322 COL9A1P20849 921 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms