RNA–Protein interactions for RNA: ENST00000496262.1

RNF220-217, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 840 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-217ENST00000496262 POGZQ7Z3K3 1410 aa17.81■□□□□ 0.44
RNF220-217ENST00000496262 MYO5CQ9NQX4 1742 aa17.8■□□□□ 0.44
RNF220-217ENST00000496262 TROQ12816 1431 aaPredicted RBP17.8■□□□□ 0.44
RNF220-217ENST00000496262 CLIP1P30622 1438 aa17.79■□□□□ 0.44
RNF220-217ENST00000496262 RIMS1Q86UR5 1692 aaKnown RBP17.78■□□□□ 0.44
RNF220-217ENST00000496262 MLECQ14165 292 aa17.78■□□□□ 0.44
RNF220-217ENST00000496262 EFCAB2Q5VUJ9 269 aa17.78■□□□□ 0.44
RNF220-217ENST00000496262 PCF11O94913 1555 aaKnown RBP17.78■□□□□ 0.44
RNF220-217ENST00000496262 LRRIQ1Q96JM4 1722 aa17.78■□□□□ 0.44
RNF220-217ENST00000496262 ARHGAP5Q13017 1502 aa17.77■□□□□ 0.44
RNF220-217ENST00000496262 SIGLEC1Q9BZZ2 1709 aa17.76■□□□□ 0.43
RNF220-217ENST00000496262 MAGI2Q86UL8 1455 aa17.75■□□□□ 0.43
RNF220-217ENST00000496262 CASKIN1Q8WXD9 1431 aa17.73■□□□□ 0.43
RNF220-217ENST00000496262 MYT1LQ9UL68 1186 aa17.73■□□□□ 0.43
RNF220-217ENST00000496262 CCDC18Q5T9S5 1454 aa17.72■□□□□ 0.43
RNF220-217ENST00000496262 ZNF518AQ6AHZ1 1483 aa17.7■□□□□ 0.42
RNF220-217ENST00000496262 AFAP1Q8N556 730 aa17.7■□□□□ 0.42
RNF220-217ENST00000496262 C9orf84Q5VXU9 1444 aa17.7■□□□□ 0.42
RNF220-217ENST00000496262 ATP10AO60312 1499 aa17.69■□□□□ 0.42
RNF220-217ENST00000496262 LMTK3Q96Q04 1460 aa17.69■□□□□ 0.42
RNF220-217ENST00000496262 FYCO1Q9BQS8 1478 aa17.67■□□□□ 0.42
RNF220-217ENST00000496262 FER1L4A9Z1Z3 1794 aa17.66■□□□□ 0.42
RNF220-217ENST00000496262 HSPA2P54652 639 aa17.66■□□□□ 0.42
RNF220-217ENST00000496262 CDC42BPBQ9Y5S2 1711 aa17.66■□□□□ 0.42
RNF220-217ENST00000496262 PREX2Q70Z35 1606 aa17.65■□□□□ 0.42
RNF220-217ENST00000496262 KDM5CP41229 1560 aa17.65■□□□□ 0.42
RNF220-217ENST00000496262 ABCC1P33527 1531 aa17.62■□□□□ 0.41
RNF220-217ENST00000496262 ARHGEF12Q9NZN5 1544 aa17.62■□□□□ 0.41
RNF220-217ENST00000496262 ZNF777Q9ULD5 760 aaPredicted RBP17.62■□□□□ 0.41
RNF220-217ENST00000496262 TRAPPC8Q9Y2L5 1435 aa17.62■□□□□ 0.41
RNF220-217ENST00000496262 DIP2CQ9Y2E4 1556 aa17.62■□□□□ 0.41
RNF220-217ENST00000496262 CEBPAP49715 358 aaPredicted RBP17.6■□□□□ 0.41
RNF220-217ENST00000496262 ABCA6Q8N139 1617 aa17.6■□□□□ 0.41
RNF220-217ENST00000496262 ITSN2Q9NZM3 1697 aa17.59■□□□□ 0.41
RNF220-217ENST00000496262 CDC42BPAQ5VT25 1732 aa17.58■□□□□ 0.41
RNF220-217ENST00000496262 MLH3Q9UHC1 1453 aa17.57■□□□□ 0.4
RNF220-217ENST00000496262 SAMD9LQ8IVG5 1584 aa17.54■□□□□ 0.4
RNF220-217ENST00000496262 SYCP2Q9BX26 1530 aa17.54■□□□□ 0.4
RNF220-217ENST00000496262 GPATCH8Q9UKJ3 1502 aaKnown RBP17.54■□□□□ 0.4
RNF220-217ENST00000496262 MTUS2Q5JR59 1369 aa17.53■□□□□ 0.4
RNF220-217ENST00000496262 FBXO41Q8TF61 875 aa17.53■□□□□ 0.4
RNF220-217ENST00000496262 ESF1Q9H501 851 aaKnown RBP17.53■□□□□ 0.4
RNF220-217ENST00000496262 REREQ9P2R6 1566 aa17.53■□□□□ 0.4
RNF220-217ENST00000496262 CCNB3Q8WWL7 1395 aa17.53■□□□□ 0.4
RNF220-217ENST00000496262 HNRNPMP52272 730 aaKnown RBP eCLIP17.52■□□□□ 0.4
RNF220-217ENST00000496262 KIDINS220Q9ULH0 1771 aa17.51■□□□□ 0.39
RNF220-217ENST00000496262 CFDP1Q9UEE9 299 aaPredicted RBP17.51■□□□□ 0.39
RNF220-217ENST00000496262 PREX1Q8TCU6 1659 aa17.51■□□□□ 0.39
RNF220-217ENST00000496262 CEP162Q5TB80 1403 aa17.5■□□□□ 0.39
RNF220-217ENST00000496262 SPAG9O60271 1321 aaKnown RBP17.49■□□□□ 0.39
RNF220-217ENST00000496262 AGLP35573 1532 aa17.48■□□□□ 0.39
RNF220-217ENST00000496262 UHRF1BP1Q6BDS2 1440 aa17.47■□□□□ 0.39
RNF220-217ENST00000496262 ATP7AQ04656 1500 aa17.45■□□□□ 0.38
RNF220-217ENST00000496262 EHBP1L1Q8N3D4 1523 aa17.45■□□□□ 0.38
RNF220-217ENST00000496262 C3P01024 1663 aa17.45■□□□□ 0.38
RNF220-217ENST00000496262 PLEKHH2Q8IVE3 1493 aa17.44■□□□□ 0.38
RNF220-217ENST00000496262 KIAA1107Q9UPP5 1409 aa17.44■□□□□ 0.38
RNF220-217ENST00000496262 ZNF644Q9H582 1327 aaPredicted RBP17.44■□□□□ 0.38
RNF220-217ENST00000496262 TIAM1Q13009 1591 aa17.43■□□□□ 0.38
RNF220-217ENST00000496262 SUPT6HQ7KZ85 1726 aaKnown RBP17.42■□□□□ 0.38
RNF220-217ENST00000496262 INO80Q9ULG1 1556 aaPredicted RBP17.41■□□□□ 0.38
RNF220-217ENST00000496262 CNTLNQ9NXG0 1405 aa17.4■□□□□ 0.38
RNF220-217ENST00000496262 A2MP01023 1474 aa17.39■□□□□ 0.37
RNF220-217ENST00000496262 CERKQ8TCT0 537 aa17.39■□□□□ 0.37
RNF220-217ENST00000496262 LOC105371045A0A1W2PR82 267 aa17.37■□□□□ 0.37
RNF220-217ENST00000496262 GGT6Q6P531 493 aa17.37■□□□□ 0.37
RNF220-217ENST00000496262 PLXNC1O60486 1568 aa17.36■□□□□ 0.37
RNF220-217ENST00000496262 STRCQ7RTU9 1775 aa17.36■□□□□ 0.37
RNF220-217ENST00000496262 NCOA2Q15596 1464 aa17.36■□□□□ 0.37
RNF220-217ENST00000496262 DMRT2Q9Y5R5 561 aa17.35■□□□□ 0.37
RNF220-217ENST00000496262 ZMYM3Q14202 1370 aa17.35■□□□□ 0.37
RNF220-217ENST00000496262 CLTCQ00610 1675 aaKnown RBP17.34■□□□□ 0.37
RNF220-217ENST00000496262 MBD5Q9P267 1494 aa17.34■□□□□ 0.37
RNF220-217ENST00000496262 MROH2AA6NES4 1674 aa17.32■□□□□ 0.36
RNF220-217ENST00000496262 SETD1BQ9UPS6 1966 aaKnown RBP17.32■□□□□ 0.36
RNF220-217ENST00000496262 ADGBQ8N7X0 1667 aa17.32■□□□□ 0.36
RNF220-217ENST00000496262 CAMSAP2Q08AD1 1489 aa17.31■□□□□ 0.36
RNF220-217ENST00000496262 NPATQ14207 1427 aa17.31■□□□□ 0.36
RNF220-217ENST00000496262 CCDC141Q6ZP82 1450 aa17.3■□□□□ 0.36
RNF220-217ENST00000496262 VPS8Q8N3P4 1428 aa17.29■□□□□ 0.36
RNF220-217ENST00000496262 RTEL1-TNFRSF6BF6WH68 1400 aa17.28■□□□□ 0.36
RNF220-217ENST00000496262 NCOA1Q15788 1441 aa17.28■□□□□ 0.36
RNF220-217ENST00000496262 CAMSAP1Q5T5Y3 1602 aa17.28■□□□□ 0.36
RNF220-217ENST00000496262 PTPRTO14522 1441 aa17.27■□□□□ 0.35
RNF220-217ENST00000496262 MYO3AQ8NEV4 1616 aa17.26■□□□□ 0.35
RNF220-217ENST00000496262 PTPRKQ15262 1439 aa17.26■□□□□ 0.35
RNF220-217ENST00000496262 DHX29Q7Z478 1369 aaKnown RBP17.26■□□□□ 0.35
RNF220-217ENST00000496262 LRRC9Q6ZRR7 1453 aa17.25■□□□□ 0.35
RNF220-217ENST00000496262 KIF3BO15066 747 aa17.25■□□□□ 0.35
RNF220-217ENST00000496262 NCKAP5LQ9HCH0 1330 aa17.24■□□□□ 0.35
RNF220-217ENST00000496262 KANK4Q5T7N3 995 aaPredicted RBP17.23■□□□□ 0.35
RNF220-217ENST00000496262 CEP170BQ9Y4F5 1589 aaPredicted RBP17.23■□□□□ 0.35
RNF220-217ENST00000496262 PPP6R1Q9UPN7 881 aa17.22■□□□□ 0.35
RNF220-217ENST00000496262 TSPY4P0CV99 314 aa17.21■□□□□ 0.35
RNF220-217ENST00000496262 TSPY10P0CW01 314 aa17.21■□□□□ 0.35
RNF220-217ENST00000496262 ZNF142P52746 1687 aaPredicted RBP17.2■□□□□ 0.34
RNF220-217ENST00000496262 RSPH4AQ5TD94 716 aa17.2■□□□□ 0.34
RNF220-217ENST00000496262 ARHGEF5Q12774 1597 aa17.19■□□□□ 0.34
RNF220-217ENST00000496262 FBXO31Q5XUX0 539 aaPredicted RBP17.19■□□□□ 0.34
RNF220-217ENST00000496262 WASHC2CQ9Y4E1 1318 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms