RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 GPR153Q6NV75 609 aa11.84□□□□□ -0.51
CLK1-214ENST00000496205 FBXO22Q8NEZ5 403 aa11.84□□□□□ -0.51
CLK1-214ENST00000496205 BCL11BQ9C0K0 894 aaPredicted RBP11.84□□□□□ -0.51
CLK1-214ENST00000496205 ZSWIM6Q9HCJ5 1215 aa11.81□□□□□ -0.52
CLK1-214ENST00000496205 NLRP6P59044 892 aa11.8□□□□□ -0.52
CLK1-214ENST00000496205 STK24Q9Y6E0 443 aa11.8□□□□□ -0.52
CLK1-214ENST00000496205 MFRPQ9BY79 579 aa11.79□□□□□ -0.52
CLK1-214ENST00000496205 ARSIQ5FYB1 569 aa11.77□□□□□ -0.53
CLK1-214ENST00000496205 ZNF687Q8N1G0 1237 aa11.76□□□□□ -0.53
CLK1-214ENST00000496205 KHSRPQ92945 711 aaKnown RBP eCLIP11.75□□□□□ -0.531e-9■■■■■ 32.2
CLK1-214ENST00000496205 STK25O00506 426 aa11.73□□□□□ -0.53
CLK1-214ENST00000496205 TAOK2Q9UL54 1235 aa11.73□□□□□ -0.53
CLK1-214ENST00000496205 ECM2O94769 699 aaPredicted RBP11.72□□□□□ -0.53
CLK1-214ENST00000496205 KIF3CO14782 793 aa11.7□□□□□ -0.54
CLK1-214ENST00000496205 PKD2Q13563 968 aa11.7□□□□□ -0.54
CLK1-214ENST00000496205 RGL2O15211 777 aa11.69□□□□□ -0.54
CLK1-214ENST00000496205 C2orf72A6NCS6 295 aa11.68□□□□□ -0.54
CLK1-214ENST00000496205 RNF166Q96A37 237 aaPredicted RBP11.68□□□□□ -0.54
CLK1-214ENST00000496205 ZNF316A6NFI3 1004 aaPredicted RBP11.67□□□□□ -0.54
CLK1-214ENST00000496205 MYT1LQ9UL68 1186 aa11.65□□□□□ -0.54
CLK1-214ENST00000496205 PPP1R37O75864 691 aa11.61□□□□□ -0.55
CLK1-214ENST00000496205 ANKRD13DQ6ZTN6 518 aa11.61□□□□□ -0.55
CLK1-214ENST00000496205 NUDT7P0C024 238 aa11.6□□□□□ -0.55
CLK1-214ENST00000496205 PCDHGA4Q9Y5G9 962 aa11.57□□□□□ -0.56
CLK1-214ENST00000496205 POTEEQ6S8J3 1075 aa11.56□□□□□ -0.56
CLK1-214ENST00000496205 LHX6Q9UPM6 363 aa11.56□□□□□ -0.56
CLK1-214ENST00000496205 SLC34A2O95436 690 aa11.55□□□□□ -0.56
CLK1-214ENST00000496205 LSM11P83369 360 aaKnown RBP eCLIP11.55□□□□□ -0.56
CLK1-214ENST00000496205 TMC2Q8TDI7 906 aa11.54□□□□□ -0.56
CLK1-214ENST00000496205 PTGER2P43116 358 aa11.52□□□□□ -0.57
CLK1-214ENST00000496205 AXIN2Q9Y2T1 843 aa11.52□□□□□ -0.57
CLK1-214ENST00000496205 PBX2P40425 430 aa11.47□□□□□ -0.57
CLK1-214ENST00000496205 KDM4FA0A1W2PPD8 638 aa11.45□□□□□ -0.58
CLK1-214ENST00000496205 PTCD2Q8WV60 388 aaKnown RBP11.41□□□□□ -0.58
CLK1-214ENST00000496205 FOXK1P85037 733 aa11.4□□□□□ -0.58
CLK1-214ENST00000496205 PLPP6Q8IY26 295 aa11.39□□□□□ -0.59
CLK1-214ENST00000496205 HS6ST3Q8IZP7 471 aa11.39□□□□□ -0.59
CLK1-214ENST00000496205 ARHGAP33O14559 1287 aa11.38□□□□□ -0.59
CLK1-214ENST00000496205 GPHNQ9NQX3 736 aaPredicted RBP11.38□□□□□ -0.59
CLK1-214ENST00000496205 DSG2Q14126 1118 aa11.36□□□□□ -0.59
CLK1-214ENST00000496205 ADGRD1Q6QNK2 874 aa11.36□□□□□ -0.59
CLK1-214ENST00000496205 DMRTA1Q5VZB9 504 aa11.35□□□□□ -0.59
CLK1-214ENST00000496205 PSDA5PKW4 1024 aaPredicted RBP11.34□□□□□ -0.59
CLK1-214ENST00000496205 PSEN2P49810 448 aa11.34□□□□□ -0.59
CLK1-214ENST00000496205 CHGAP10645 457 aaKnown RBP11.32□□□□□ -0.6
CLK1-214ENST00000496205 NKX1-1Q15270 411 aaPredicted RBP11.32□□□□□ -0.6
CLK1-214ENST00000496205 HRO43593 1189 aa11.29□□□□□ -0.6
CLK1-214ENST00000496205 TK2O00142 265 aa11.27□□□□□ -0.61
CLK1-214ENST00000496205 HCSTQ9UBK5 93 aa11.27□□□□□ -0.61
CLK1-214ENST00000496205 TBC1D12O60347 775 aa11.26□□□□□ -0.61
CLK1-214ENST00000496205 PPP4R3BQ5MIZ7 849 aa11.26□□□□□ -0.61
CLK1-214ENST00000496205 PLA2G2EQ9NZK7 142 aa11.25□□□□□ -0.61
CLK1-214ENST00000496205 OXER1Q8TDS5 423 aa11.24□□□□□ -0.61
CLK1-214ENST00000496205 DNAJC5Q9H3Z4 198 aa11.24□□□□□ -0.61
CLK1-214ENST00000496205 UPF1Q92900 1129 aaKnown RBP eCLIP11.22□□□□□ -0.61
CLK1-214ENST00000496205 KCNK17Q96T54 332 aa11.22□□□□□ -0.61
CLK1-214ENST00000496205 CRISPLD2Q9H0B8 497 aa11.22□□□□□ -0.61
CLK1-214ENST00000496205 KCTD12Q96CX2 325 aaKnown RBP11.19□□□□□ -0.62
CLK1-214ENST00000496205 NCKAP5LQ9HCH0 1330 aa11.17□□□□□ -0.62
CLK1-214ENST00000496205 PPP1R15BQ5SWA1 713 aa11.17□□□□□ -0.62
CLK1-214ENST00000496205 ZNF454Q8N9F8 522 aa11.16□□□□□ -0.62
CLK1-214ENST00000496205 VPS9D1Q9Y2B5 631 aa11.16□□□□□ -0.62
CLK1-214ENST00000496205 FOSBP53539 338 aa11.12□□□□□ -0.63
CLK1-214ENST00000496205 STAC3Q96MF2 364 aa11.12□□□□□ -0.63
CLK1-214ENST00000496205 BCL2L12Q9HB09 334 aa11.12□□□□□ -0.63
CLK1-214ENST00000496205 RYDENQ9NUL5 291 aaKnown RBP11.12□□□□□ -0.63
CLK1-214ENST00000496205 KCNH8Q96L42 1107 aa11.11□□□□□ -0.63
CLK1-214ENST00000496205 GTPBP6O43824 516 aaPredicted RBP11.1□□□□□ -0.63
CLK1-214ENST00000496205 PDE4AP27815 886 aa11.1□□□□□ -0.63
CLK1-214ENST00000496205 ANO8Q9HCE9 1232 aaPredicted RBP11.1□□□□□ -0.63
CLK1-214ENST00000496205 PTPN5P54829 565 aa11.08□□□□□ -0.64
CLK1-214ENST00000496205 SLC4A5Q9BY07 1137 aa11.08□□□□□ -0.64
CLK1-214ENST00000496205 BHMG1C9JSJ3 638 aaPredicted RBP11.07□□□□□ -0.64
CLK1-214ENST00000496205 EVI5O60447 810 aa11.06□□□□□ -0.64
CLK1-214ENST00000496205 LARP6Q9BRS8 491 aaKnown RBP11.06□□□□□ -0.64
CLK1-214ENST00000496205 ZBED2Q9BTP6 218 aa11.06□□□□□ -0.64
CLK1-214ENST00000496205 PTPREP23469 700 aa11.05□□□□□ -0.64
CLK1-214ENST00000496205 ADAM33Q9BZ11 813 aa11.05□□□□□ -0.64
CLK1-214ENST00000496205 JPH4Q96JJ6 628 aa11.04□□□□□ -0.64
CLK1-214ENST00000496205 ZDHHC16Q969W1 377 aa11.02□□□□□ -0.65
CLK1-214ENST00000496205 DDX27Q96GQ7 796 aaKnown RBP11.02□□□□□ -0.65
CLK1-214ENST00000496205 THSD4Q6ZMP0 1018 aa11.01□□□□□ -0.65
CLK1-214ENST00000496205 EMILIN3Q9NT22 766 aa11.01□□□□□ -0.65
CLK1-214ENST00000496205 MFSD10Q14728 455 aa11□□□□□ -0.65
CLK1-214ENST00000496205 MAP3K9P80192 1104 aa10.99□□□□□ -0.65
CLK1-214ENST00000496205 CADPS2Q86UW7 1296 aa10.97□□□□□ -0.65
CLK1-214ENST00000496205 MRPL50Q8N5N7 158 aaKnown RBP10.97□□□□□ -0.65
CLK1-214ENST00000496205 WNT2BQ93097 391 aa10.97□□□□□ -0.65
CLK1-214ENST00000496205 PCDHGA10Q9Y5H3 936 aa10.96□□□□□ -0.65
CLK1-214ENST00000496205 GOLGA8CPA6NN73 597 aa10.95□□□□□ -0.66
CLK1-214ENST00000496205 COL9A1P20849 921 aa10.92□□□□□ -0.66
CLK1-214ENST00000496205 PROX2Q3B8N5 592 aa10.92□□□□□ -0.66
CLK1-214ENST00000496205 IFFO2Q5TF58 517 aa10.92□□□□□ -0.66
CLK1-214ENST00000496205 PPP1R3GB7ZBB8 358 aa10.9□□□□□ -0.66
CLK1-214ENST00000496205 NBPF3Q9H094 633 aa10.9□□□□□ -0.66
CLK1-214ENST00000496205 DCAF8L2P0C7V8 631 aa10.89□□□□□ -0.67
CLK1-214ENST00000496205 RABGEF1Q9UJ41 708 aa10.87□□□□□ -0.67
CLK1-214ENST00000496205 PHF14O94880 888 aa10.86□□□□□ -0.67
CLK1-214ENST00000496205 TYW1BQ6NUM6 668 aa10.86□□□□□ -0.67
CLK1-214ENST00000496205 A0A0G2JS52 829 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms