RNA–Protein interactions for RNA: ENST00000496202.5

PRPF3-207, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 1 (best)

Gene PRPF3, Length 1,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-207ENST00000496202 ARAP3Q8WWN8 1544 aa15.07■□□□□ 0
PRPF3-207ENST00000496202 KDM6BO15054 1643 aa15.06■□□□□ 0
PRPF3-207ENST00000496202 ITSN2Q9NZM3 1697 aa15.06■□□□□ 0
PRPF3-207ENST00000496202 CDC42BPAQ5VT25 1732 aa15.06■□□□□ 0
PRPF3-207ENST00000496202 KANK4Q5T7N3 995 aaPredicted RBP15.06■□□□□ 0
PRPF3-207ENST00000496202 NEO1Q92859 1461 aa15.06■□□□□ 0
PRPF3-207ENST00000496202 PHLDB1Q86UU1 1377 aa15.05■□□□□ -0
PRPF3-207ENST00000496202 CDC42BPBQ9Y5S2 1711 aa15.04■□□□□ -0
PRPF3-207ENST00000496202 EFCAB2Q5VUJ9 269 aa15.04■□□□□ -0
PRPF3-207ENST00000496202 GPATCH8Q9UKJ3 1502 aaKnown RBP15.02□□□□□ -0.01
PRPF3-207ENST00000496202 AKNAQ7Z591 1439 aa15.01□□□□□ -0.01
PRPF3-207ENST00000496202 CFDP1Q9UEE9 299 aaPredicted RBP15□□□□□ -0.01
PRPF3-207ENST00000496202 ADGRL1O94910 1474 aa15□□□□□ -0.01
PRPF3-207ENST00000496202 ZNF777Q9ULD5 760 aaPredicted RBP14.99□□□□□ -0.01
PRPF3-207ENST00000496202 DENND4BO75064 1496 aaPredicted RBP14.96□□□□□ -0.01
PRPF3-207ENST00000496202 MYOM3Q5VTT5 1437 aa14.96□□□□□ -0.01
PRPF3-207ENST00000496202 PLEKHH2Q8IVE3 1493 aa14.95□□□□□ -0.02
PRPF3-207ENST00000496202 SAMD9LQ8IVG5 1584 aa14.95□□□□□ -0.02
PRPF3-207ENST00000496202 SCAPERQ9BY12 1400 aa14.95□□□□□ -0.02
PRPF3-207ENST00000496202 PPARGC1BQ86YN6 1023 aaKnown RBP14.95□□□□□ -0.02
PRPF3-207ENST00000496202 ABCC1P33527 1531 aa14.95□□□□□ -0.02
PRPF3-207ENST00000496202 COL17A1Q9UMD9 1497 aaPredicted RBP14.95□□□□□ -0.02
PRPF3-207ENST00000496202 RICTORQ6R327 1708 aa14.94□□□□□ -0.02
PRPF3-207ENST00000496202 POGZQ7Z3K3 1410 aa14.92□□□□□ -0.02
PRPF3-207ENST00000496202 SYCP2Q9BX26 1530 aa14.92□□□□□ -0.02
PRPF3-207ENST00000496202 CAMSAP2Q08AD1 1489 aa14.92□□□□□ -0.02
PRPF3-207ENST00000496202 MIA2Q96PC5 1412 aa14.92□□□□□ -0.02
PRPF3-207ENST00000496202 FRMPD1Q5SYB0 1578 aa14.91□□□□□ -0.02
PRPF3-207ENST00000496202 ZNF518AQ6AHZ1 1483 aa14.91□□□□□ -0.02
PRPF3-207ENST00000496202 RAPGEF3O95398 923 aa14.91□□□□□ -0.02
PRPF3-207ENST00000496202 FGD6Q6ZV73 1430 aa14.9□□□□□ -0.02
PRPF3-207ENST00000496202 KIAA1107Q9UPP5 1409 aa14.9□□□□□ -0.02
PRPF3-207ENST00000496202 ZNF644Q9H582 1327 aaPredicted RBP14.89□□□□□ -0.03
PRPF3-207ENST00000496202 PTPN23Q9H3S7 1636 aa14.88□□□□□ -0.03
PRPF3-207ENST00000496202 ZMYM4Q5VZL5 1548 aa14.88□□□□□ -0.03
PRPF3-207ENST00000496202 MYT1LQ9UL68 1186 aa14.88□□□□□ -0.03
PRPF3-207ENST00000496202 ARHGEF12Q9NZN5 1544 aa14.87□□□□□ -0.03
PRPF3-207ENST00000496202 TRAPPC8Q9Y2L5 1435 aa14.87□□□□□ -0.03
PRPF3-207ENST00000496202 HNRNPMP52272 730 aaKnown RBP eCLIP14.87□□□□□ -0.03
PRPF3-207ENST00000496202 KDM5CP41229 1560 aa14.85□□□□□ -0.03
PRPF3-207ENST00000496202 HECW2Q9P2P5 1572 aa14.85□□□□□ -0.03
PRPF3-207ENST00000496202 AFAP1Q8N556 730 aa14.85□□□□□ -0.03
PRPF3-207ENST00000496202 CCDC141Q6ZP82 1450 aa14.84□□□□□ -0.03
PRPF3-207ENST00000496202 MAGI2Q86UL8 1455 aa14.84□□□□□ -0.03
PRPF3-207ENST00000496202 ZFYVE16Q7Z3T8 1539 aa14.84□□□□□ -0.03
PRPF3-207ENST00000496202 ARHGEF40Q8TER5 1519 aa14.84□□□□□ -0.03
PRPF3-207ENST00000496202 ARHGEF5Q12774 1597 aa14.84□□□□□ -0.03
PRPF3-207ENST00000496202 TCOF1Q13428 1488 aaKnown RBP14.83□□□□□ -0.03
PRPF3-207ENST00000496202 FAM50AQ14320 339 aaKnown RBP14.83□□□□□ -0.04
PRPF3-207ENST00000496202 SPAG9O60271 1321 aaKnown RBP14.83□□□□□ -0.04
PRPF3-207ENST00000496202 MBD5Q9P267 1494 aa14.82□□□□□ -0.04
PRPF3-207ENST00000496202 RSPH4AQ5TD94 716 aa14.82□□□□□ -0.04
PRPF3-207ENST00000496202 MLH3Q9UHC1 1453 aa14.81□□□□□ -0.04
PRPF3-207ENST00000496202 ATP7AQ04656 1500 aa14.81□□□□□ -0.04
PRPF3-207ENST00000496202 TSPY4P0CV99 314 aa14.79□□□□□ -0.04
PRPF3-207ENST00000496202 TSPY10P0CW01 314 aa14.79□□□□□ -0.04
PRPF3-207ENST00000496202 INO80Q9ULG1 1556 aaPredicted RBP14.79□□□□□ -0.04
PRPF3-207ENST00000496202 KIDINS220Q9ULH0 1771 aa14.79□□□□□ -0.04
PRPF3-207ENST00000496202 YEATS2Q9ULM3 1422 aa14.79□□□□□ -0.04
PRPF3-207ENST00000496202 CROCC2H7BZ55 1655 aa14.78□□□□□ -0.04
PRPF3-207ENST00000496202 DNMT1P26358 1616 aaKnown RBP14.78□□□□□ -0.04
PRPF3-207ENST00000496202 ABCA6Q8N139 1617 aa14.77□□□□□ -0.04
PRPF3-207ENST00000496202 KCNA4P22459 653 aa14.77□□□□□ -0.05
PRPF3-207ENST00000496202 DIP2CQ9Y2E4 1556 aa14.77□□□□□ -0.05
PRPF3-207ENST00000496202 DAPK1P53355 1430 aa14.76□□□□□ -0.05
PRPF3-207ENST00000496202 C9orf84Q5VXU9 1444 aa14.76□□□□□ -0.05
PRPF3-207ENST00000496202 ATP10AO60312 1499 aa14.76□□□□□ -0.05
PRPF3-207ENST00000496202 MAST1Q9Y2H9 1570 aa14.75□□□□□ -0.05
PRPF3-207ENST00000496202 SHANK2Q9UPX8 1470 aa14.75□□□□□ -0.05
PRPF3-207ENST00000496202 RTEL1-TNFRSF6BF6WH68 1400 aa14.75□□□□□ -0.05
PRPF3-207ENST00000496202 ABCC5O15440 1437 aa14.75□□□□□ -0.05
PRPF3-207ENST00000496202 RRBP1Q9P2E9 1410 aaKnown RBP14.75□□□□□ -0.05
PRPF3-207ENST00000496202 ADGBQ8N7X0 1667 aa14.74□□□□□ -0.05
PRPF3-207ENST00000496202 ARID4BQ4LE39 1312 aaPredicted RBP14.74□□□□□ -0.05
PRPF3-207ENST00000496202 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.73□□□□□ -0.05
PRPF3-207ENST00000496202 PLXNC1O60486 1568 aa14.71□□□□□ -0.05
PRPF3-207ENST00000496202 REREQ9P2R6 1566 aa14.71□□□□□ -0.05
PRPF3-207ENST00000496202 A2MP01023 1474 aa14.7□□□□□ -0.06
PRPF3-207ENST00000496202 ITGAEP38570 1179 aa14.7□□□□□ -0.06
PRPF3-207ENST00000496202 ANKRD30AQ9BXX3 1397 aa14.7□□□□□ -0.06
PRPF3-207ENST00000496202 CHIC2Q9UKJ5 165 aa14.69□□□□□ -0.06
PRPF3-207ENST00000496202 KIF15Q9NS87 1388 aa14.67□□□□□ -0.06
PRPF3-207ENST00000496202 SIGLEC1Q9BZZ2 1709 aa14.66□□□□□ -0.06
PRPF3-207ENST00000496202 ADGRL2O95490 1459 aa14.66□□□□□ -0.06
PRPF3-207ENST00000496202 AGLP35573 1532 aa14.66□□□□□ -0.06
PRPF3-207ENST00000496202 DHX29Q7Z478 1369 aaKnown RBP14.65□□□□□ -0.06
PRPF3-207ENST00000496202 RRP7BPQ9NSQ0 103 aa14.65□□□□□ -0.06
PRPF3-207ENST00000496202 BCORL1Q5H9F3 1711 aa14.65□□□□□ -0.06
PRPF3-207ENST00000496202 DUOX2Q9NRD8 1548 aa14.65□□□□□ -0.06
PRPF3-207ENST00000496202 MLECQ14165 292 aa14.64□□□□□ -0.07
PRPF3-207ENST00000496202 ADRA2BP18089 450 aa14.63□□□□□ -0.07
PRPF3-207ENST00000496202 PTPRKQ15262 1439 aa14.63□□□□□ -0.07
PRPF3-207ENST00000496202 NCOA1Q15788 1441 aa14.63□□□□□ -0.07
PRPF3-207ENST00000496202 ROCK1Q13464 1354 aa14.62□□□□□ -0.07
PRPF3-207ENST00000496202 EIF2AK4Q9P2K8 1649 aaKnown RBP14.62□□□□□ -0.07
PRPF3-207ENST00000496202 ERBINQ96RT1 1412 aa14.61□□□□□ -0.07
PRPF3-207ENST00000496202 FER1L4A9Z1Z3 1794 aa14.61□□□□□ -0.07
PRPF3-207ENST00000496202 KIF3BO15066 747 aa14.6□□□□□ -0.07
PRPF3-207ENST00000496202 ADAMTSL3P82987 1691 aa14.6□□□□□ -0.07
PRPF3-207ENST00000496202 MADDQ8WXG6 1647 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms