RNA–Protein interactions for RNA: ENST00000496091.1

TRIM27-206, Transcript of tripartite motif containing 27, humanhuman

TSL 3

Gene TRIM27, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-206ENST00000496091 RIMBP2O15034 1052 aa12.78□□□□□ -0.36
TRIM27-206ENST00000496091 FBXO22Q8NEZ5 403 aa12.78□□□□□ -0.36
TRIM27-206ENST00000496091 MMRN1Q13201 1228 aa12.77□□□□□ -0.37
TRIM27-206ENST00000496091 PKD2Q13563 968 aa12.77□□□□□ -0.37
TRIM27-206ENST00000496091 STK25O00506 426 aa12.75□□□□□ -0.37
TRIM27-206ENST00000496091 KRTAP3-3Q9BYR6 98 aa12.74□□□□□ -0.37
TRIM27-206ENST00000496091 KRTAP3-2Q9BYR7 98 aa12.74□□□□□ -0.37
TRIM27-206ENST00000496091 ZSWIM6Q9HCJ5 1215 aa12.74□□□□□ -0.37
TRIM27-206ENST00000496091 MFRPQ9BY79 579 aa12.73□□□□□ -0.37
TRIM27-206ENST00000496091 RGL2O15211 777 aa12.71□□□□□ -0.37
TRIM27-206ENST00000496091 ERBB3P21860 1342 aa12.7□□□□□ -0.38
TRIM27-206ENST00000496091 GPR153Q6NV75 609 aa12.67□□□□□ -0.38
TRIM27-206ENST00000496091 VARS2Q5ST30 1063 aaKnown RBP12.62□□□□□ -0.39
TRIM27-206ENST00000496091 KIF3CO14782 793 aa12.6□□□□□ -0.39
TRIM27-206ENST00000496091 ARSIQ5FYB1 569 aa12.58□□□□□ -0.4
TRIM27-206ENST00000496091 C2orf72A6NCS6 295 aa12.56□□□□□ -0.4
TRIM27-206ENST00000496091 ZNF687Q8N1G0 1237 aa12.56□□□□□ -0.4
TRIM27-206ENST00000496091 PPP1R37O75864 691 aa12.5□□□□□ -0.41
TRIM27-206ENST00000496091 TMC2Q8TDI7 906 aa12.5□□□□□ -0.41
TRIM27-206ENST00000496091 ZNF316A6NFI3 1004 aaPredicted RBP12.49□□□□□ -0.41
TRIM27-206ENST00000496091 SLC34A2O95436 690 aa12.49□□□□□ -0.41
TRIM27-206ENST00000496091 KHSRPQ92945 711 aaKnown RBP eCLIP12.49□□□□□ -0.41
TRIM27-206ENST00000496091 HS6ST3Q8IZP7 471 aa12.47□□□□□ -0.41
TRIM27-206ENST00000496091 CCDC180Q9P1Z9 1646 aa12.44□□□□□ -0.42
TRIM27-206ENST00000496091 PCDHGA4Q9Y5G9 962 aa12.42□□□□□ -0.42
TRIM27-206ENST00000496091 NUDT7P0C024 238 aa12.41□□□□□ -0.42
TRIM27-206ENST00000496091 MYT1LQ9UL68 1186 aa12.39□□□□□ -0.43
TRIM27-206ENST00000496091 CHGAP10645 457 aaKnown RBP12.38□□□□□ -0.43
TRIM27-206ENST00000496091 RNF166Q96A37 237 aaPredicted RBP12.38□□□□□ -0.43
TRIM27-206ENST00000496091 PTGER2P43116 358 aa12.37□□□□□ -0.43
TRIM27-206ENST00000496091 DNAJC5Q9H3Z4 198 aa12.37□□□□□ -0.43
TRIM27-206ENST00000496091 LHX6Q9UPM6 363 aa12.36□□□□□ -0.43
TRIM27-206ENST00000496091 PBX2P40425 430 aa12.35□□□□□ -0.43
TRIM27-206ENST00000496091 FOXK1P85037 733 aa12.35□□□□□ -0.43
TRIM27-206ENST00000496091 ANKRD13DQ6ZTN6 518 aa12.35□□□□□ -0.43
TRIM27-206ENST00000496091 GPHNQ9NQX3 736 aaPredicted RBP12.35□□□□□ -0.43
TRIM27-206ENST00000496091 LSM11P83369 360 aaKnown RBP eCLIP12.33□□□□□ -0.44
TRIM27-206ENST00000496091 PTCD2Q8WV60 388 aaKnown RBP12.33□□□□□ -0.44
TRIM27-206ENST00000496091 KDM4FA0A1W2PPD8 638 aa12.31□□□□□ -0.44
TRIM27-206ENST00000496091 PLPP6Q8IY26 295 aa12.31□□□□□ -0.44
TRIM27-206ENST00000496091 RYDENQ9NUL5 291 aaKnown RBP12.3□□□□□ -0.44
TRIM27-206ENST00000496091 PSDA5PKW4 1024 aaPredicted RBP12.29□□□□□ -0.44
TRIM27-206ENST00000496091 NKX1-1Q15270 411 aaPredicted RBP12.29□□□□□ -0.44
TRIM27-206ENST00000496091 DSG2Q14126 1118 aa12.27□□□□□ -0.45
TRIM27-206ENST00000496091 POTEEQ6S8J3 1075 aa12.27□□□□□ -0.45
TRIM27-206ENST00000496091 AXIN2Q9Y2T1 843 aa12.25□□□□□ -0.45
TRIM27-206ENST00000496091 TBC1D12O60347 775 aa12.24□□□□□ -0.45
TRIM27-206ENST00000496091 ARHGAP33O14559 1287 aa12.22□□□□□ -0.45
TRIM27-206ENST00000496091 CRISPLD2Q9H0B8 497 aa12.18□□□□□ -0.46
TRIM27-206ENST00000496091 OXER1Q8TDS5 423 aa12.16□□□□□ -0.46
TRIM27-206ENST00000496091 PPP4R3BQ5MIZ7 849 aa12.14□□□□□ -0.47
TRIM27-206ENST00000496091 ADGRD1Q6QNK2 874 aa12.14□□□□□ -0.47
TRIM27-206ENST00000496091 TK2O00142 265 aa12.13□□□□□ -0.47
TRIM27-206ENST00000496091 GTPBP6O43824 516 aaPredicted RBP12.13□□□□□ -0.47
TRIM27-206ENST00000496091 PDE4AP27815 886 aa12.12□□□□□ -0.47
TRIM27-206ENST00000496091 PSEN2P49810 448 aa12.11□□□□□ -0.47
TRIM27-206ENST00000496091 PPP1R15BQ5SWA1 713 aa12.11□□□□□ -0.47
TRIM27-206ENST00000496091 NCKAP5LQ9HCH0 1330 aa12.1□□□□□ -0.47
TRIM27-206ENST00000496091 DMRTA1Q5VZB9 504 aa12.08□□□□□ -0.48
TRIM27-206ENST00000496091 UPF1Q92900 1129 aaKnown RBP eCLIP12.07□□□□□ -0.48
TRIM27-206ENST00000496091 HRO43593 1189 aa12.06□□□□□ -0.48
TRIM27-206ENST00000496091 HCSTQ9UBK5 93 aa12.06□□□□□ -0.48
TRIM27-206ENST00000496091 KCNH8Q96L42 1107 aa12.04□□□□□ -0.48
TRIM27-206ENST00000496091 ANO8Q9HCE9 1232 aaPredicted RBP12.04□□□□□ -0.48
TRIM27-206ENST00000496091 KCNK17Q96T54 332 aa12.02□□□□□ -0.49
TRIM27-206ENST00000496091 LARP6Q9BRS8 491 aaKnown RBP12.02□□□□□ -0.49
TRIM27-206ENST00000496091 ZNF454Q8N9F8 522 aa12.01□□□□□ -0.49
TRIM27-206ENST00000496091 FOSBP53539 338 aa12□□□□□ -0.49
TRIM27-206ENST00000496091 DDX27Q96GQ7 796 aaKnown RBP12□□□□□ -0.49
TRIM27-206ENST00000496091 BCL2L12Q9HB09 334 aa12□□□□□ -0.49
TRIM27-206ENST00000496091 DCAF8L2P0C7V8 631 aa11.99□□□□□ -0.49
TRIM27-206ENST00000496091 STAC3Q96MF2 364 aa11.99□□□□□ -0.49
TRIM27-206ENST00000496091 MFSD10Q14728 455 aa11.98□□□□□ -0.49
TRIM27-206ENST00000496091 EVI5O60447 810 aa11.97□□□□□ -0.49
TRIM27-206ENST00000496091 SLC4A5Q9BY07 1137 aa11.97□□□□□ -0.49
TRIM27-206ENST00000496091 VPS9D1Q9Y2B5 631 aa11.97□□□□□ -0.49
TRIM27-206ENST00000496091 JPH4Q96JJ6 628 aa11.95□□□□□ -0.5
TRIM27-206ENST00000496091 PLA2G2EQ9NZK7 142 aa11.94□□□□□ -0.5
TRIM27-206ENST00000496091 PTPREP23469 700 aa11.93□□□□□ -0.5
TRIM27-206ENST00000496091 MAP3K9P80192 1104 aa11.93□□□□□ -0.5
TRIM27-206ENST00000496091 KCTD12Q96CX2 325 aaKnown RBP11.92□□□□□ -0.5
TRIM27-206ENST00000496091 ZDHHC16Q969W1 377 aa11.91□□□□□ -0.5
TRIM27-206ENST00000496091 ABCC9O60706 1549 aa11.91□□□□□ -0.5
TRIM27-206ENST00000496091 EMILIN3Q9NT22 766 aa11.9□□□□□ -0.5
TRIM27-206ENST00000496091 BHMG1C9JSJ3 638 aaPredicted RBP11.88□□□□□ -0.51
TRIM27-206ENST00000496091 CADPS2Q86UW7 1296 aa11.88□□□□□ -0.51
TRIM27-206ENST00000496091 ZBED2Q9BTP6 218 aa11.88□□□□□ -0.51
TRIM27-206ENST00000496091 ADAM33Q9BZ11 813 aa11.88□□□□□ -0.51
TRIM27-206ENST00000496091 ZCCHC6Q5VYS8 1495 aaKnown RBP11.84□□□□□ -0.51
TRIM27-206ENST00000496091 PCDHGA10Q9Y5H3 936 aa11.83□□□□□ -0.52
TRIM27-206ENST00000496091 CAMK2BQ13554 666 aa11.8□□□□□ -0.52
TRIM27-206ENST00000496091 MRPL50Q8N5N7 158 aaKnown RBP11.8□□□□□ -0.52
TRIM27-206ENST00000496091 BBXQ8WY36 941 aaPredicted RBP11.8□□□□□ -0.52
TRIM27-206ENST00000496091 PTPN5P54829 565 aa11.79□□□□□ -0.52
TRIM27-206ENST00000496091 FBXW7Q969H0 707 aa11.79□□□□□ -0.52
TRIM27-206ENST00000496091 GOLGA8CPA6NN73 597 aa11.78□□□□□ -0.52
TRIM27-206ENST00000496091 PHF14O94880 888 aa11.78□□□□□ -0.52
TRIM27-206ENST00000496091 NBPF3Q9H094 633 aa11.78□□□□□ -0.52
TRIM27-206ENST00000496091 PPP1R3GB7ZBB8 358 aa11.77□□□□□ -0.53
TRIM27-206ENST00000496091 TYW1BQ6NUM6 668 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms