RNA–Protein interactions for RNA: ENST00000495988.1

APOBEC3A-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 4

Gene APOBEC3A, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-204ENST00000495988 EFCAB2Q5VUJ9 269 aa27.56■■■□□ 2
APOBEC3A-204ENST00000495988 BCORL1Q5H9F3 1711 aa27.55■■■□□ 2
APOBEC3A-204ENST00000495988 ZFYVE16Q7Z3T8 1539 aa27.53■■■□□ 2
APOBEC3A-204ENST00000495988 POGZQ7Z3K3 1410 aa27.53■■■□□ 2
APOBEC3A-204ENST00000495988 MAGI2Q86UL8 1455 aa27.51■■■□□ 2
APOBEC3A-204ENST00000495988 YEATS2Q9ULM3 1422 aa27.51■■□□□ 1.99
APOBEC3A-204ENST00000495988 ARHGAP5Q13017 1502 aa27.51■■□□□ 1.99
APOBEC3A-204ENST00000495988 PTPRMP28827 1452 aa27.51■■□□□ 1.99
APOBEC3A-204ENST00000495988 FYCO1Q9BQS8 1478 aa27.5■■□□□ 1.99
APOBEC3A-204ENST00000495988 MADDQ8WXG6 1647 aa27.49■■□□□ 1.99
APOBEC3A-204ENST00000495988 CDC42BPBQ9Y5S2 1711 aa27.43■■□□□ 1.98
APOBEC3A-204ENST00000495988 SIGLEC1Q9BZZ2 1709 aa27.42■■□□□ 1.98
APOBEC3A-204ENST00000495988 ZNF518AQ6AHZ1 1483 aa27.41■■□□□ 1.98
APOBEC3A-204ENST00000495988 PREX2Q70Z35 1606 aa27.41■■□□□ 1.98
APOBEC3A-204ENST00000495988 RIMS1Q86UR5 1692 aaKnown RBP27.4■■□□□ 1.98
APOBEC3A-204ENST00000495988 ATP10AO60312 1499 aa27.37■■□□□ 1.97
APOBEC3A-204ENST00000495988 AFAP1Q8N556 730 aa27.36■■□□□ 1.97
APOBEC3A-204ENST00000495988 KDM5CP41229 1560 aa27.35■■□□□ 1.97
APOBEC3A-204ENST00000495988 C9orf84Q5VXU9 1444 aa27.34■■□□□ 1.97
APOBEC3A-204ENST00000495988 CDC42BPAQ5VT25 1732 aa27.34■■□□□ 1.97
APOBEC3A-204ENST00000495988 MLECQ14165 292 aa27.34■■□□□ 1.97
APOBEC3A-204ENST00000495988 MYT1LQ9UL68 1186 aa27.32■■□□□ 1.96
APOBEC3A-204ENST00000495988 ABCC1P33527 1531 aa27.31■■□□□ 1.96
APOBEC3A-204ENST00000495988 FER1L4A9Z1Z3 1794 aa27.28■■□□□ 1.96
APOBEC3A-204ENST00000495988 ITSN2Q9NZM3 1697 aa27.28■■□□□ 1.96
APOBEC3A-204ENST00000495988 ARHGEF12Q9NZN5 1544 aa27.28■■□□□ 1.96
APOBEC3A-204ENST00000495988 CEP162Q5TB80 1403 aa27.27■■□□□ 1.96
APOBEC3A-204ENST00000495988 TRAPPC8Q9Y2L5 1435 aa27.27■■□□□ 1.96
APOBEC3A-204ENST00000495988 PLPPR3Q6T4P5 718 aa27.27■■□□□ 1.96
APOBEC3A-204ENST00000495988 DIP2CQ9Y2E4 1556 aa27.26■■□□□ 1.95
APOBEC3A-204ENST00000495988 MLH3Q9UHC1 1453 aa27.25■■□□□ 1.95
APOBEC3A-204ENST00000495988 ZNF777Q9ULD5 760 aaPredicted RBP27.24■■□□□ 1.95
APOBEC3A-204ENST00000495988 GPATCH8Q9UKJ3 1502 aaKnown RBP27.24■■□□□ 1.95
APOBEC3A-204ENST00000495988 MTUS2Q5JR59 1369 aa27.23■■□□□ 1.95
APOBEC3A-204ENST00000495988 LMTK3Q96Q04 1460 aa27.22■■□□□ 1.95
APOBEC3A-204ENST00000495988 ABCA6Q8N139 1617 aa27.22■■□□□ 1.95
APOBEC3A-204ENST00000495988 SAMD9LQ8IVG5 1584 aa27.21■■□□□ 1.95
APOBEC3A-204ENST00000495988 REREQ9P2R6 1566 aa27.19■■□□□ 1.94
APOBEC3A-204ENST00000495988 CCNB3Q8WWL7 1395 aa27.18■■□□□ 1.94
APOBEC3A-204ENST00000495988 SYCP2Q9BX26 1530 aa27.16■■□□□ 1.94
APOBEC3A-204ENST00000495988 CFDP1Q9UEE9 299 aaPredicted RBP27.16■■□□□ 1.94
APOBEC3A-204ENST00000495988 KIDINS220Q9ULH0 1771 aa27.16■■□□□ 1.94
APOBEC3A-204ENST00000495988 EHBP1L1Q8N3D4 1523 aa27.15■■□□□ 1.94
APOBEC3A-204ENST00000495988 ILDR1Q86SU0 546 aaPredicted RBP27.14■■□□□ 1.94
APOBEC3A-204ENST00000495988 HNRNPMP52272 730 aaKnown RBP eCLIP27.12■■□□□ 1.93
APOBEC3A-204ENST00000495988 PLEKHH2Q8IVE3 1493 aa27.12■■□□□ 1.93
APOBEC3A-204ENST00000495988 AGLP35573 1532 aa27.11■■□□□ 1.93
APOBEC3A-204ENST00000495988 KIAA1107Q9UPP5 1409 aa27.09■■□□□ 1.93
APOBEC3A-204ENST00000495988 TIAM1Q13009 1591 aa27.09■■□□□ 1.93
APOBEC3A-204ENST00000495988 LOC105371045A0A1W2PR82 267 aa27.08■■□□□ 1.93
APOBEC3A-204ENST00000495988 CEBPAP49715 358 aaPredicted RBP27.08■■□□□ 1.93
APOBEC3A-204ENST00000495988 HSPA2P54652 639 aa27.08■■□□□ 1.93
APOBEC3A-204ENST00000495988 SPAG9O60271 1321 aaKnown RBP27.08■■□□□ 1.93
APOBEC3A-204ENST00000495988 ATP7AQ04656 1500 aa27.03■■□□□ 1.92
APOBEC3A-204ENST00000495988 ESF1Q9H501 851 aaKnown RBP27.03■■□□□ 1.92
APOBEC3A-204ENST00000495988 PREX1Q8TCU6 1659 aa27.02■■□□□ 1.92
APOBEC3A-204ENST00000495988 INO80Q9ULG1 1556 aaPredicted RBP27.01■■□□□ 1.92
APOBEC3A-204ENST00000495988 ZNF644Q9H582 1327 aaPredicted RBP27■■□□□ 1.91
APOBEC3A-204ENST00000495988 SUPT6HQ7KZ85 1726 aaKnown RBP26.99■■□□□ 1.91
APOBEC3A-204ENST00000495988 VPS8Q8N3P4 1428 aa26.99■■□□□ 1.91
APOBEC3A-204ENST00000495988 C3P01024 1663 aa26.98■■□□□ 1.91
APOBEC3A-204ENST00000495988 NCOA2Q15596 1464 aa26.97■■□□□ 1.91
APOBEC3A-204ENST00000495988 CNTLNQ9NXG0 1405 aa26.94■■□□□ 1.9
APOBEC3A-204ENST00000495988 A2MP01023 1474 aa26.93■■□□□ 1.9
APOBEC3A-204ENST00000495988 MBD5Q9P267 1494 aa26.93■■□□□ 1.9
APOBEC3A-204ENST00000495988 UHRF1BP1Q6BDS2 1440 aa26.93■■□□□ 1.9
APOBEC3A-204ENST00000495988 SETD1BQ9UPS6 1966 aaKnown RBP26.93■■□□□ 1.9
APOBEC3A-204ENST00000495988 PLXNC1O60486 1568 aa26.92■■□□□ 1.9
APOBEC3A-204ENST00000495988 ADGBQ8N7X0 1667 aa26.89■■□□□ 1.9
APOBEC3A-204ENST00000495988 CAMSAP2Q08AD1 1489 aa26.87■■□□□ 1.89
APOBEC3A-204ENST00000495988 LRRC9Q6ZRR7 1453 aa26.87■■□□□ 1.89
APOBEC3A-204ENST00000495988 MROH2AA6NES4 1674 aa26.86■■□□□ 1.89
APOBEC3A-204ENST00000495988 RTEL1-TNFRSF6BF6WH68 1400 aa26.86■■□□□ 1.89
APOBEC3A-204ENST00000495988 CCDC141Q6ZP82 1450 aa26.85■■□□□ 1.89
APOBEC3A-204ENST00000495988 GGT6Q6P531 493 aa26.83■■□□□ 1.89
APOBEC3A-204ENST00000495988 FBXO41Q8TF61 875 aa26.83■■□□□ 1.89
APOBEC3A-204ENST00000495988 CLTCQ00610 1675 aaKnown RBP26.82■■□□□ 1.88
APOBEC3A-204ENST00000495988 ZMYM3Q14202 1370 aa26.82■■□□□ 1.88
APOBEC3A-204ENST00000495988 MAP3K1Q13233 1512 aa26.81■■□□□ 1.88
APOBEC3A-204ENST00000495988 RSPH4AQ5TD94 716 aa26.8■■□□□ 1.88
APOBEC3A-204ENST00000495988 STRCQ7RTU9 1775 aa26.79■■□□□ 1.88
APOBEC3A-204ENST00000495988 KANK4Q5T7N3 995 aaPredicted RBP26.78■■□□□ 1.88
APOBEC3A-204ENST00000495988 NPATQ14207 1427 aa26.78■■□□□ 1.88
APOBEC3A-204ENST00000495988 DHX29Q7Z478 1369 aaKnown RBP26.77■■□□□ 1.88
APOBEC3A-204ENST00000495988 ARHGEF5Q12774 1597 aa26.76■■□□□ 1.87
APOBEC3A-204ENST00000495988 PPP6R1Q9UPN7 881 aa26.75■■□□□ 1.87
APOBEC3A-204ENST00000495988 DMRT2Q9Y5R5 561 aa26.75■■□□□ 1.87
APOBEC3A-204ENST00000495988 TSPY4P0CV99 314 aa26.72■■□□□ 1.87
APOBEC3A-204ENST00000495988 TSPY10P0CW01 314 aa26.72■■□□□ 1.87
APOBEC3A-204ENST00000495988 KIF3BO15066 747 aa26.69■■□□□ 1.86
APOBEC3A-204ENST00000495988 MYOM3Q5VTT5 1437 aa26.69■■□□□ 1.86
APOBEC3A-204ENST00000495988 PTPRKQ15262 1439 aa26.68■■□□□ 1.86
APOBEC3A-204ENST00000495988 APLP2Q06481 763 aa26.68■■□□□ 1.86
APOBEC3A-204ENST00000495988 CERKQ8TCT0 537 aa26.68■■□□□ 1.86
APOBEC3A-204ENST00000495988 MIA2Q96PC5 1412 aa26.67■■□□□ 1.86
APOBEC3A-204ENST00000495988 MYO3AQ8NEV4 1616 aa26.65■■□□□ 1.86
APOBEC3A-204ENST00000495988 PTPRTO14522 1441 aa26.65■■□□□ 1.86
APOBEC3A-204ENST00000495988 NCOA1Q15788 1441 aa26.65■■□□□ 1.86
APOBEC3A-204ENST00000495988 CAMSAP1Q5T5Y3 1602 aa26.64■■□□□ 1.85
APOBEC3A-204ENST00000495988 MAST1Q9Y2H9 1570 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms