RNA–Protein interactions for RNA: ENST00000495948.1

COL9A2-210, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 2

Gene COL9A2, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-210ENST00000495948 RICTORQ6R327 1708 aa31.78■■■□□ 2.68
COL9A2-210ENST00000495948 ADGRL1O94910 1474 aa31.77■■■□□ 2.68
COL9A2-210ENST00000495948 DENND4BO75064 1496 aaPredicted RBP31.76■■■□□ 2.67
COL9A2-210ENST00000495948 EFCAB2Q5VUJ9 269 aa31.73■■■□□ 2.67
COL9A2-210ENST00000495948 SUPT6HQ7KZ85 1726 aaKnown RBP31.72■■■□□ 2.67
COL9A2-210ENST00000495948 GPATCH8Q9UKJ3 1502 aaKnown RBP31.71■■■□□ 2.67
COL9A2-210ENST00000495948 LRRC9Q6ZRR7 1453 aa31.71■■■□□ 2.67
COL9A2-210ENST00000495948 ZMYM4Q5VZL5 1548 aa31.7■■■□□ 2.67
COL9A2-210ENST00000495948 POGZQ7Z3K3 1410 aa31.7■■■□□ 2.67
COL9A2-210ENST00000495948 ITSN2Q9NZM3 1697 aa31.7■■■□□ 2.66
COL9A2-210ENST00000495948 ABCC1P33527 1531 aa31.68■■■□□ 2.66
COL9A2-210ENST00000495948 SCAPERQ9BY12 1400 aa31.66■■■□□ 2.66
COL9A2-210ENST00000495948 CCNB3Q8WWL7 1395 aa31.66■■■□□ 2.66
COL9A2-210ENST00000495948 RAPGEF3O95398 923 aa31.65■■■□□ 2.66
COL9A2-210ENST00000495948 NCOA2Q15596 1464 aa31.65■■■□□ 2.66
COL9A2-210ENST00000495948 ARHGEF40Q8TER5 1519 aa31.64■■■□□ 2.66
COL9A2-210ENST00000495948 SAMD9LQ8IVG5 1584 aa31.62■■■□□ 2.65
COL9A2-210ENST00000495948 ZNF518AQ6AHZ1 1483 aa31.61■■■□□ 2.65
COL9A2-210ENST00000495948 KDM5CP41229 1560 aa31.6■■■□□ 2.65
COL9A2-210ENST00000495948 MAGI2Q86UL8 1455 aa31.58■■■□□ 2.65
COL9A2-210ENST00000495948 ZFYVE16Q7Z3T8 1539 aa31.54■■■□□ 2.64
COL9A2-210ENST00000495948 PLEKHH2Q8IVE3 1493 aa31.54■■■□□ 2.64
COL9A2-210ENST00000495948 ARHGEF12Q9NZN5 1544 aa31.54■■■□□ 2.64
COL9A2-210ENST00000495948 SYCP2Q9BX26 1530 aa31.53■■■□□ 2.64
COL9A2-210ENST00000495948 APLP2Q06481 763 aa31.52■■■□□ 2.64
COL9A2-210ENST00000495948 CFDP1Q9UEE9 299 aaPredicted RBP31.52■■■□□ 2.64
COL9A2-210ENST00000495948 HECW2Q9P2P5 1572 aa31.51■■■□□ 2.64
COL9A2-210ENST00000495948 KANK4Q5T7N3 995 aaPredicted RBP31.51■■■□□ 2.63
COL9A2-210ENST00000495948 KIAA1107Q9UPP5 1409 aa31.49■■■□□ 2.63
COL9A2-210ENST00000495948 TRAPPC8Q9Y2L5 1435 aa31.48■■■□□ 2.63
COL9A2-210ENST00000495948 YEATS2Q9ULM3 1422 aa31.46■■■□□ 2.63
COL9A2-210ENST00000495948 ZNF777Q9ULD5 760 aaPredicted RBP31.44■■■□□ 2.62
COL9A2-210ENST00000495948 MLH3Q9UHC1 1453 aa31.43■■■□□ 2.62
COL9A2-210ENST00000495948 CAMSAP2Q08AD1 1489 aa31.41■■■□□ 2.62
COL9A2-210ENST00000495948 MYOM3Q5VTT5 1437 aa31.41■■■□□ 2.62
COL9A2-210ENST00000495948 AFAP1Q8N556 730 aa31.39■■■□□ 2.62
COL9A2-210ENST00000495948 DIP2CQ9Y2E4 1556 aa31.38■■■□□ 2.61
COL9A2-210ENST00000495948 ABCA6Q8N139 1617 aa31.36■■■□□ 2.61
COL9A2-210ENST00000495948 MBD5Q9P267 1494 aa31.36■■■□□ 2.61
COL9A2-210ENST00000495948 MIA2Q96PC5 1412 aa31.36■■■□□ 2.61
COL9A2-210ENST00000495948 INO80Q9ULG1 1556 aaPredicted RBP31.35■■■□□ 2.61
COL9A2-210ENST00000495948 C9orf84Q5VXU9 1444 aa31.35■■■□□ 2.61
COL9A2-210ENST00000495948 KIDINS220Q9ULH0 1771 aa31.35■■■□□ 2.61
COL9A2-210ENST00000495948 REREQ9P2R6 1566 aa31.34■■■□□ 2.61
COL9A2-210ENST00000495948 ATP10AO60312 1499 aa31.33■■■□□ 2.61
COL9A2-210ENST00000495948 KDM4FA0A1W2PPD8 638 aa31.33■■■□□ 2.61
COL9A2-210ENST00000495948 SIGLEC1Q9BZZ2 1709 aa31.32■■■□□ 2.61
COL9A2-210ENST00000495948 ZNF644Q9H582 1327 aaPredicted RBP31.32■■■□□ 2.6
COL9A2-210ENST00000495948 ARHGEF5Q12774 1597 aa31.31■■■□□ 2.6
COL9A2-210ENST00000495948 ATP7AQ04656 1500 aa31.31■■■□□ 2.6
COL9A2-210ENST00000495948 BCORL1Q5H9F3 1711 aa31.31■■■□□ 2.6
COL9A2-210ENST00000495948 HNRNPMP52272 730 aaKnown RBP eCLIP31.3■■■□□ 2.6
COL9A2-210ENST00000495948 CCDC141Q6ZP82 1450 aa31.29■■■□□ 2.6
COL9A2-210ENST00000495948 ADAMTSL3P82987 1691 aa31.26■■■□□ 2.6
COL9A2-210ENST00000495948 SPAG9O60271 1321 aaKnown RBP31.24■■■□□ 2.59
COL9A2-210ENST00000495948 PTPN23Q9H3S7 1636 aa31.22■■■□□ 2.59
COL9A2-210ENST00000495948 FGD6Q6ZV73 1430 aa31.22■■■□□ 2.59
COL9A2-210ENST00000495948 MYT1LQ9UL68 1186 aa31.21■■■□□ 2.59
COL9A2-210ENST00000495948 RTEL1-TNFRSF6BF6WH68 1400 aa31.2■■■□□ 2.59
COL9A2-210ENST00000495948 ARID4BQ4LE39 1312 aaPredicted RBP31.2■■■□□ 2.58
COL9A2-210ENST00000495948 TCOF1Q13428 1488 aaKnown RBP31.2■■■□□ 2.58
COL9A2-210ENST00000495948 AGLP35573 1532 aa31.19■■■□□ 2.58
COL9A2-210ENST00000495948 RSPH4AQ5TD94 716 aa31.19■■■□□ 2.58
COL9A2-210ENST00000495948 AEBP2Q6ZN18 517 aaPredicted RBP31.19■■■□□ 2.58
COL9A2-210ENST00000495948 PLXNC1O60486 1568 aa31.17■■■□□ 2.58
COL9A2-210ENST00000495948 MADDQ8WXG6 1647 aa31.16■■■□□ 2.58
COL9A2-210ENST00000495948 ADGBQ8N7X0 1667 aa31.16■■■□□ 2.58
COL9A2-210ENST00000495948 MAST1Q9Y2H9 1570 aa31.15■■■□□ 2.58
COL9A2-210ENST00000495948 CROCC2H7BZ55 1655 aa31.13■■■□□ 2.57
COL9A2-210ENST00000495948 A2MP01023 1474 aa31.1■■■□□ 2.57
COL9A2-210ENST00000495948 SHANK2Q9UPX8 1470 aa31.09■■■□□ 2.57
COL9A2-210ENST00000495948 DNMT1P26358 1616 aaKnown RBP31.09■■■□□ 2.57
COL9A2-210ENST00000495948 FER1L4A9Z1Z3 1794 aa31.08■■■□□ 2.57
COL9A2-210ENST00000495948 RIMS1Q86UR5 1692 aaKnown RBP31.06■■■□□ 2.56
COL9A2-210ENST00000495948 PTPRMP28827 1452 aa31.04■■■□□ 2.56
COL9A2-210ENST00000495948 DAPK1P53355 1430 aa31.01■■■□□ 2.55
COL9A2-210ENST00000495948 TSPY4P0CV99 314 aa31.01■■■□□ 2.55
COL9A2-210ENST00000495948 TSPY10P0CW01 314 aa31.01■■■□□ 2.55
COL9A2-210ENST00000495948 ABCC5O15440 1437 aa31■■■□□ 2.55
COL9A2-210ENST00000495948 MLECQ14165 292 aa30.98■■■□□ 2.55
COL9A2-210ENST00000495948 DHX29Q7Z478 1369 aaKnown RBP30.96■■■□□ 2.55
COL9A2-210ENST00000495948 EIF2AK4Q9P2K8 1649 aaKnown RBP30.9■■■□□ 2.54
COL9A2-210ENST00000495948 CNTLNQ9NXG0 1405 aa30.88■■■□□ 2.53
COL9A2-210ENST00000495948 DUOX2Q9NRD8 1548 aa30.88■■■□□ 2.53
COL9A2-210ENST00000495948 PPARGC1BQ86YN6 1023 aaKnown RBP30.87■■■□□ 2.53
COL9A2-210ENST00000495948 MROH2AA6NES4 1674 aa30.87■■■□□ 2.53
COL9A2-210ENST00000495948 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.86■■■□□ 2.53
COL9A2-210ENST00000495948 ADGRL2O95490 1459 aa30.86■■■□□ 2.53
COL9A2-210ENST00000495948 FAM135AQ9P2D6 1515 aa30.86■■■□□ 2.53
COL9A2-210ENST00000495948 FAM50AQ14320 339 aaKnown RBP30.85■■■□□ 2.53
COL9A2-210ENST00000495948 RNF17Q9BXT8 1623 aaKnown RBP30.84■■■□□ 2.53
COL9A2-210ENST00000495948 KIF15Q9NS87 1388 aa30.84■■■□□ 2.53
COL9A2-210ENST00000495948 RRBP1Q9P2E9 1410 aaKnown RBP30.82■■■□□ 2.52
COL9A2-210ENST00000495948 ERBINQ96RT1 1412 aa30.81■■■□□ 2.52
COL9A2-210ENST00000495948 C3P01024 1663 aa30.8■■■□□ 2.52
COL9A2-210ENST00000495948 ANKRD30AQ9BXX3 1397 aa30.79■■■□□ 2.52
COL9A2-210ENST00000495948 CLTCQ00610 1675 aaKnown RBP30.78■■■□□ 2.52
COL9A2-210ENST00000495948 NCOA1Q15788 1441 aa30.77■■■□□ 2.52
COL9A2-210ENST00000495948 KDM5DQ9BY66 1539 aa30.77■■■□□ 2.52
COL9A2-210ENST00000495948 ESF1Q9H501 851 aaKnown RBP30.76■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms