RNA–Protein interactions for RNA: ENST00000495726.1

NUP188-210, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 516 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-210ENST00000495726 SOX12O15370 315 aa7.98□□□□□ -1.13
NUP188-210ENST00000495726 RYDENQ9NUL5 291 aaKnown RBP7.98□□□□□ -1.13
NUP188-210ENST00000495726 BOLA1Q9Y3E2 137 aa7.98□□□□□ -1.13
NUP188-210ENST00000495726 G3V3G9 751 aa7.97□□□□□ -1.13
NUP188-210ENST00000495726 MFRPQ9BY79 579 aa7.97□□□□□ -1.13
NUP188-210ENST00000495726 NLRP6P59044 892 aa7.95□□□□□ -1.14
NUP188-210ENST00000495726 FBXO22Q8NEZ5 403 aa7.95□□□□□ -1.14
NUP188-210ENST00000495726 LCE2DQ5TA82 110 aaPredicted RBP7.93□□□□□ -1.14
NUP188-210ENST00000495726 MICALL2Q8IY33 904 aa7.93□□□□□ -1.14
NUP188-210ENST00000495726 CADPS2Q86UW7 1296 aa7.92□□□□□ -1.14
NUP188-210ENST00000495726 PPP1R37O75864 691 aa7.9□□□□□ -1.14
NUP188-210ENST00000495726 TMEM92Q6UXU6 159 aa7.89□□□□□ -1.15
NUP188-210ENST00000495726 P3H3Q8IVL6 736 aa7.89□□□□□ -1.15
NUP188-210ENST00000495726 TMEM121BQ9BXQ6 578 aaPredicted RBP7.89□□□□□ -1.15
NUP188-210ENST00000495726 POTEMA6NI47 508 aa7.88□□□□□ -1.15
NUP188-210ENST00000495726 POTEGQ6S5H5 508 aa7.88□□□□□ -1.15
NUP188-210ENST00000495726 ST18O60284 1047 aa7.87□□□□□ -1.15
NUP188-210ENST00000495726 KCNV2Q8TDN2 545 aa7.87□□□□□ -1.15
NUP188-210ENST00000495726 WDR70Q9NW82 654 aa7.86□□□□□ -1.15
NUP188-210ENST00000495726 MARVELD3Q96A59 401 aa7.83□□□□□ -1.16
NUP188-210ENST00000495726 SNPHO15079 494 aa7.82□□□□□ -1.16
NUP188-210ENST00000495726 TIMELESSQ9UNS1 1208 aa7.82□□□□□ -1.16
NUP188-210ENST00000495726 TULP1O00294 542 aaPredicted RBP7.81□□□□□ -1.16
NUP188-210ENST00000495726 LMOD2Q6P5Q4 547 aa7.81□□□□□ -1.16
NUP188-210ENST00000495726 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.81□□□□□ -1.16
NUP188-210ENST00000495726 GTF3C3Q9Y5Q9 886 aa7.81□□□□□ -1.16
NUP188-210ENST00000495726 HOXB3P14651 431 aaPredicted RBP7.8□□□□□ -1.16
NUP188-210ENST00000495726 C2orf72A6NCS6 295 aa7.77□□□□□ -1.17
NUP188-210ENST00000495726 TMEM132AQ24JP5 1023 aa7.77□□□□□ -1.17
NUP188-210ENST00000495726 ZNF710Q8N1W2 664 aa7.76□□□□□ -1.17
NUP188-210ENST00000495726 EMP3P54852 163 aa7.74□□□□□ -1.17
NUP188-210ENST00000495726 DOK7Q18PE1 504 aa7.73□□□□□ -1.17
NUP188-210ENST00000495726 TMC2Q8TDI7 906 aa7.73□□□□□ -1.17
NUP188-210ENST00000495726 ARHGEF1Q92888 912 aaKnown RBP7.73□□□□□ -1.17
NUP188-210ENST00000495726 KIF3CO14782 793 aa7.72□□□□□ -1.17
NUP188-210ENST00000495726 E2F4Q16254 413 aa7.72□□□□□ -1.17
NUP188-210ENST00000495726 KHSRPQ92945 711 aaKnown RBP eCLIP7.72□□□□□ -1.17
NUP188-210ENST00000495726 POTEB3A0JP26 581 aa7.71□□□□□ -1.18
NUP188-210ENST00000495726 FAM205CA6NFA0 338 aa7.71□□□□□ -1.18
NUP188-210ENST00000495726 POTEBQ6S5H4 581 aa7.71□□□□□ -1.18
NUP188-210ENST00000495726 CDAN1Q8IWY9 1227 aa7.71□□□□□ -1.18
NUP188-210ENST00000495726 PLSCR2Q9NRY7 297 aa7.71□□□□□ -1.18
NUP188-210ENST00000495726 ARSIQ5FYB1 569 aa7.7□□□□□ -1.18
NUP188-210ENST00000495726 SEMA3EO15041 775 aa7.69□□□□□ -1.18
NUP188-210ENST00000495726 ZC3H15Q8WU90 426 aaKnown RBP7.69□□□□□ -1.18
NUP188-210ENST00000495726 TESPA1A2RU30 521 aaPredicted RBP7.68□□□□□ -1.18
NUP188-210ENST00000495726 HOXB1P14653 301 aaPredicted RBP7.68□□□□□ -1.18
NUP188-210ENST00000495726 NCKAP5LQ9HCH0 1330 aa7.68□□□□□ -1.18
NUP188-210ENST00000495726 RIMBP2O15034 1052 aa7.67□□□□□ -1.18
NUP188-210ENST00000495726 BRPF1P55201 1214 aaPredicted RBP7.67□□□□□ -1.18
NUP188-210ENST00000495726 HS3ST6Q96QI5 342 aa7.67□□□□□ -1.18
NUP188-210ENST00000495726 DSG2Q14126 1118 aa7.66□□□□□ -1.18
NUP188-210ENST00000495726 GPR153Q6NV75 609 aa7.66□□□□□ -1.18
NUP188-210ENST00000495726 ERBB3P21860 1342 aa7.65□□□□□ -1.18
NUP188-210ENST00000495726 PLPP6Q8IY26 295 aa7.65□□□□□ -1.18
NUP188-210ENST00000495726 LARP6Q9BRS8 491 aaKnown RBP7.65□□□□□ -1.18
NUP188-210ENST00000495726 GPHNQ9NQX3 736 aaPredicted RBP7.65□□□□□ -1.18
NUP188-210ENST00000495726 SLC24A3Q9HC58 644 aa7.64□□□□□ -1.19
NUP188-210ENST00000495726 NUDT7P0C024 238 aa7.63□□□□□ -1.19
NUP188-210ENST00000495726 PDE4AP27815 886 aa7.63□□□□□ -1.19
NUP188-210ENST00000495726 MFSD10Q14728 455 aa7.63□□□□□ -1.19
NUP188-210ENST00000495726 VARS2Q5ST30 1063 aaKnown RBP7.63□□□□□ -1.19
NUP188-210ENST00000495726 ERICH6Q7L0X2 663 aa7.63□□□□□ -1.19
NUP188-210ENST00000495726 CRISPLD2Q9H0B8 497 aa7.62□□□□□ -1.19
NUP188-210ENST00000495726 PCDHGA4Q9Y5G9 962 aa7.62□□□□□ -1.19
NUP188-210ENST00000495726 FOXK1P85037 733 aa7.61□□□□□ -1.19
NUP188-210ENST00000495726 NEUROD2Q15784 382 aa7.61□□□□□ -1.19
NUP188-210ENST00000495726 UPF1Q92900 1129 aaKnown RBP eCLIP7.61□□□□□ -1.19
NUP188-210ENST00000495726 ZSWIM6Q9HCJ5 1215 aa7.61□□□□□ -1.19
NUP188-210ENST00000495726 PCDH10Q9P2E7 1040 aa7.6□□□□□ -1.19
NUP188-210ENST00000495726 PPP1R15BQ5SWA1 713 aa7.59□□□□□ -1.19
NUP188-210ENST00000495726 C14orf37Q86TY3 774 aa7.59□□□□□ -1.19
NUP188-210ENST00000495726 DDX27Q96GQ7 796 aaKnown RBP7.59□□□□□ -1.19
NUP188-210ENST00000495726 ARIH1Q9Y4X5 557 aaPredicted RBP7.59□□□□□ -1.19
NUP188-210ENST00000495726 ZMYND10O75800 440 aa7.58□□□□□ -1.2
NUP188-210ENST00000495726 ZNF316A6NFI3 1004 aaPredicted RBP7.57□□□□□ -1.2
NUP188-210ENST00000495726 SLC34A2O95436 690 aa7.57□□□□□ -1.2
NUP188-210ENST00000495726 CAMK2BQ13554 666 aa7.57□□□□□ -1.2
NUP188-210ENST00000495726 SMYD5Q6GMV2 418 aa7.57□□□□□ -1.2
NUP188-210ENST00000495726 KRTAP3-3Q9BYR6 98 aa7.56□□□□□ -1.2
NUP188-210ENST00000495726 KRTAP3-2Q9BYR7 98 aa7.56□□□□□ -1.2
NUP188-210ENST00000495726 LHX6Q9UPM6 363 aa7.56□□□□□ -1.2
NUP188-210ENST00000495726 PTCD2Q8WV60 388 aaKnown RBP7.54□□□□□ -1.2
NUP188-210ENST00000495726 BARGINQ6ZT62 677 aa7.53□□□□□ -1.2
NUP188-210ENST00000495726 CCDC180Q9P1Z9 1646 aa7.52□□□□□ -1.2
NUP188-210ENST00000495726 MLLT3P42568 568 aaPredicted RBP7.52□□□□□ -1.21
NUP188-210ENST00000495726 RBM26Q5T8P6 1007 aaKnown RBP7.51□□□□□ -1.21
NUP188-210ENST00000495726 OXER1Q8TDS5 423 aa7.51□□□□□ -1.21
NUP188-210ENST00000495726 AXIN2Q9Y2T1 843 aa7.51□□□□□ -1.21
NUP188-210ENST00000495726 TBC1D12O60347 775 aa7.5□□□□□ -1.21
NUP188-210ENST00000495726 SPNS2Q8IVW8 549 aa7.5□□□□□ -1.21
NUP188-210ENST00000495726 ZNF687Q8N1G0 1237 aa7.5□□□□□ -1.21
NUP188-210ENST00000495726 ARXQ96QS3 562 aa7.5□□□□□ -1.21
NUP188-210ENST00000495726 EMILIN3Q9NT22 766 aa7.5□□□□□ -1.21
NUP188-210ENST00000495726 KDM4FA0A1W2PPD8 638 aa7.49□□□□□ -1.21
NUP188-210ENST00000495726 POTEEQ6S8J3 1075 aa7.48□□□□□ -1.21
NUP188-210ENST00000495726 GPIHBP1Q8IV16 184 aa7.48□□□□□ -1.21
NUP188-210ENST00000495726 MAP3K9P80192 1104 aa7.47□□□□□ -1.21
NUP188-210ENST00000495726 ANKRD13DQ6ZTN6 518 aa7.47□□□□□ -1.21
NUP188-210ENST00000495726 AK7Q96M32 723 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms