RNA–Protein interactions for RNA: ENST00000495509.6

PHF1-211, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-211ENST00000495509 MYO5CQ9NQX4 1742 aa23.82■■□□□ 1.4
PHF1-211ENST00000495509 PLCH2O75038 1416 aa23.81■■□□□ 1.4
PHF1-211ENST00000495509 TCOF1Q13428 1488 aaKnown RBP23.81■■□□□ 1.4
PHF1-211ENST00000495509 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.79■■□□□ 1.42e-15■■■□□ 18.3
PHF1-211ENST00000495509 FAM69CQ0P6D2 419 aa23.78■■□□□ 1.4
PHF1-211ENST00000495509 ARHGAP5Q13017 1502 aa23.78■■□□□ 1.4
PHF1-211ENST00000495509 CAMSAP2Q08AD1 1489 aa23.77■■□□□ 1.4
PHF1-211ENST00000495509 CD109Q6YHK3 1445 aa23.76■■□□□ 1.39
PHF1-211ENST00000495509 DIP2BQ9P265 1576 aa23.75■■□□□ 1.39
PHF1-211ENST00000495509 EFCAB2Q5VUJ9 269 aa23.74■■□□□ 1.39
PHF1-211ENST00000495509 GLI2P10070 1586 aa23.72■■□□□ 1.39
PHF1-211ENST00000495509 SAMD9LQ8IVG5 1584 aa23.72■■□□□ 1.39
PHF1-211ENST00000495509 HNRNPMP52272 730 aaKnown RBP eCLIP23.72■■□□□ 1.39
PHF1-211ENST00000495509 PTPRKQ15262 1439 aa23.71■■□□□ 1.39
PHF1-211ENST00000495509 ARAP3Q8WWN8 1544 aa23.69■■□□□ 1.38
PHF1-211ENST00000495509 MAP3K4Q9Y6R4 1608 aa23.69■■□□□ 1.38
PHF1-211ENST00000495509 FANCAO15360 1455 aa23.68■■□□□ 1.38
PHF1-211ENST00000495509 KIF13AQ9H1H9 1805 aa23.68■■□□□ 1.38
PHF1-211ENST00000495509 CHIC2Q9UKJ5 165 aa23.66■■□□□ 1.38
PHF1-211ENST00000495509 ABCC5O15440 1437 aa23.66■■□□□ 1.38
PHF1-211ENST00000495509 DAPK1P53355 1430 aa23.64■■□□□ 1.38
PHF1-211ENST00000495509 MBD5Q9P267 1494 aa23.64■■□□□ 1.38
PHF1-211ENST00000495509 ARHGEF12Q9NZN5 1544 aa23.64■■□□□ 1.38
PHF1-211ENST00000495509 DNMT1P26358 1616 aaKnown RBP23.64■■□□□ 1.37
PHF1-211ENST00000495509 TSPOAP1O95153 1857 aa23.64■■□□□ 1.37
PHF1-211ENST00000495509 SYCP2Q9BX26 1530 aa23.63■■□□□ 1.37
PHF1-211ENST00000495509 AKNAQ7Z591 1439 aa23.61■■□□□ 1.37
PHF1-211ENST00000495509 KIAA1107Q9UPP5 1409 aa23.61■■□□□ 1.37
PHF1-211ENST00000495509 PLEKHH2Q8IVE3 1493 aa23.6■■□□□ 1.37
PHF1-211ENST00000495509 ABCC1P33527 1531 aa23.6■■□□□ 1.37
PHF1-211ENST00000495509 ARHGEF5Q12774 1597 aa23.57■■□□□ 1.36
PHF1-211ENST00000495509 ADGRL1O94910 1474 aa23.57■■□□□ 1.36
PHF1-211ENST00000495509 SCAPERQ9BY12 1400 aa23.57■■□□□ 1.36
PHF1-211ENST00000495509 TRAPPC8Q9Y2L5 1435 aa23.57■■□□□ 1.36
PHF1-211ENST00000495509 PPRC1Q5VV67 1664 aaKnown RBP23.57■■□□□ 1.36
PHF1-211ENST00000495509 TRHP20396 242 aaPredicted RBP23.56■■□□□ 1.36
PHF1-211ENST00000495509 RSPH4AQ5TD94 716 aa23.55■■□□□ 1.36
PHF1-211ENST00000495509 AFAP1Q8N556 730 aa23.55■■□□□ 1.36
PHF1-211ENST00000495509 RRP7BPQ9NSQ0 103 aa23.55■■□□□ 1.36
PHF1-211ENST00000495509 CCDC141Q6ZP82 1450 aa23.55■■□□□ 1.36
PHF1-211ENST00000495509 CROCC2H7BZ55 1655 aa23.54■■□□□ 1.36
PHF1-211ENST00000495509 TSPY4P0CV99 314 aa23.54■■□□□ 1.36
PHF1-211ENST00000495509 TSPY10P0CW01 314 aa23.54■■□□□ 1.36
PHF1-211ENST00000495509 NEO1Q92859 1461 aa23.53■■□□□ 1.36
PHF1-211ENST00000495509 CFAP74Q9C0B2 1584 aa23.53■■□□□ 1.36
PHF1-211ENST00000495509 C9orf84Q5VXU9 1444 aa23.51■■□□□ 1.35
PHF1-211ENST00000495509 SETD5Q9C0A6 1442 aa23.48■■□□□ 1.35
PHF1-211ENST00000495509 NAIPQ13075 1403 aa23.48■■□□□ 1.35
PHF1-211ENST00000495509 SHANK2Q9UPX8 1470 aa23.48■■□□□ 1.35
PHF1-211ENST00000495509 ROCK1Q13464 1354 aa23.47■■□□□ 1.35
PHF1-211ENST00000495509 NCOA1Q15788 1441 aa23.47■■□□□ 1.35
PHF1-211ENST00000495509 RAPGEF3O95398 923 aa23.47■■□□□ 1.35
PHF1-211ENST00000495509 HFM1A2PYH4 1435 aa23.46■■□□□ 1.35
PHF1-211ENST00000495509 TEX14Q8IWB6 1497 aa23.46■■□□□ 1.35
PHF1-211ENST00000495509 RAB3GAP2Q9H2M9 1393 aa23.45■■□□□ 1.34
PHF1-211ENST00000495509 ADGBQ8N7X0 1667 aa23.45■■□□□ 1.34
PHF1-211ENST00000495509 ADGRL2O95490 1459 aa23.44■■□□□ 1.34
PHF1-211ENST00000495509 ANKRD30AQ9BXX3 1397 aa23.44■■□□□ 1.34
PHF1-211ENST00000495509 SPAG9O60271 1321 aaKnown RBP23.44■■□□□ 1.34
PHF1-211ENST00000495509 DENND4BO75064 1496 aaPredicted RBP23.42■■□□□ 1.34
PHF1-211ENST00000495509 POGZQ7Z3K3 1410 aa23.42■■□□□ 1.34
PHF1-211ENST00000495509 MAST1Q9Y2H9 1570 aa23.42■■□□□ 1.34
PHF1-211ENST00000495509 ZNF518AQ6AHZ1 1483 aa23.41■■□□□ 1.34
PHF1-211ENST00000495509 KDM6BO15054 1643 aa23.39■■□□□ 1.34
PHF1-211ENST00000495509 MYT1LQ9UL68 1186 aa23.39■■□□□ 1.33
PHF1-211ENST00000495509 GCC2Q8IWJ2 1684 aa23.39■■□□□ 1.33
PHF1-211ENST00000495509 KIF15Q9NS87 1388 aa23.37■■□□□ 1.33
PHF1-211ENST00000495509 COL17A1Q9UMD9 1497 aaPredicted RBP23.37■■□□□ 1.33
PHF1-211ENST00000495509 RICTORQ6R327 1708 aa23.37■■□□□ 1.33
PHF1-211ENST00000495509 RTEL1-TNFRSF6BF6WH68 1400 aa23.36■■□□□ 1.33
PHF1-211ENST00000495509 ZFYVE16Q7Z3T8 1539 aa23.36■■□□□ 1.33
PHF1-211ENST00000495509 KDM5CP41229 1560 aa23.35■■□□□ 1.33
PHF1-211ENST00000495509 ATP7AQ04656 1500 aa23.34■■□□□ 1.33
PHF1-211ENST00000495509 INO80Q9ULG1 1556 aaPredicted RBP23.34■■□□□ 1.33
PHF1-211ENST00000495509 FRMPD1Q5SYB0 1578 aa23.34■■□□□ 1.33
PHF1-211ENST00000495509 KIDINS220Q9ULH0 1771 aa23.33■■□□□ 1.33
PHF1-211ENST00000495509 HRCP23327 699 aa23.33■■□□□ 1.33
PHF1-211ENST00000495509 PLXNC1O60486 1568 aa23.32■■□□□ 1.32
PHF1-211ENST00000495509 ANKRD50Q9ULJ7 1429 aa23.31■■□□□ 1.32
PHF1-211ENST00000495509 MLH3Q9UHC1 1453 aa23.3■■□□□ 1.32
PHF1-211ENST00000495509 HECW2Q9P2P5 1572 aa23.28■■□□□ 1.32
PHF1-211ENST00000495509 CCER1Q8TC90 406 aaPredicted RBP23.26■■□□□ 1.31
PHF1-211ENST00000495509 DUOX2Q9NRD8 1548 aa23.25■■□□□ 1.31
PHF1-211ENST00000495509 TRIM52Q96A61 297 aa23.25■■□□□ 1.31
PHF1-211ENST00000495509 YEATS2Q9ULM3 1422 aa23.25■■□□□ 1.31
PHF1-211ENST00000495509 DHX57Q6P158 1386 aaKnown RBP23.23■■□□□ 1.31
PHF1-211ENST00000495509 ZMYM4Q5VZL5 1548 aa23.22■■□□□ 1.31
PHF1-211ENST00000495509 ABCA6Q8N139 1617 aa23.22■■□□□ 1.31
PHF1-211ENST00000495509 DHX29Q7Z478 1369 aaKnown RBP23.21■■□□□ 1.31
PHF1-211ENST00000495509 ERBINQ96RT1 1412 aa23.19■■□□□ 1.3
PHF1-211ENST00000495509 DIP2CQ9Y2E4 1556 aa23.18■■□□□ 1.3
PHF1-211ENST00000495509 A2MP01023 1474 aa23.18■■□□□ 1.3
PHF1-211ENST00000495509 MAGI2Q86UL8 1455 aa23.17■■□□□ 1.3
PHF1-211ENST00000495509 KIF3BO15066 747 aa23.15■■□□□ 1.3
PHF1-211ENST00000495509 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.15■■□□□ 1.36e-7■■■□□ 15
PHF1-211ENST00000495509 NUP155O75694 1391 aa23.13■■□□□ 1.29
PHF1-211ENST00000495509 MPHOSPH9Q99550 1183 aa23.12■■□□□ 1.29
PHF1-211ENST00000495509 ATP10AO60312 1499 aa23.11■■□□□ 1.29
PHF1-211ENST00000495509 ACIN1Q9UKV3 1341 aaKnown RBP23.1■■□□□ 1.29
PHF1-211ENST00000495509 PZPP20742 1482 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms