RNA–Protein interactions for RNA: ENST00000495484.5

PCDH15-223, Transcript of protocadherin related 15, human

TSL 5 BASIC

Gene PCDH15, Length 1,896 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-223	ENST00000495484	ITGAE	P38570	1179 aa		13.89	□□□□□ -0.19
PCDH15-223	ENST00000495484	ARAP3	Q8WWN8	1544 aa		13.88	□□□□□ -0.19
PCDH15-223	ENST00000495484	ZNF644	Q9H582	1327 aa	Predicted RBP	13.88	□□□□□ -0.19
PCDH15-223	ENST00000495484	ABCA9	Q8IUA7	1624 aa		13.88	□□□□□ -0.19
PCDH15-223	ENST00000495484	ARHGAP5	Q13017	1502 aa		13.87	□□□□□ -0.19
PCDH15-223	ENST00000495484	CD109	Q6YHK3	1445 aa		13.87	□□□□□ -0.19
PCDH15-223	ENST00000495484	PLEKHH2	Q8IVE3	1493 aa		13.87	□□□□□ -0.19
PCDH15-223	ENST00000495484	PREX2	Q70Z35	1606 aa		13.86	□□□□□ -0.19
PCDH15-223	ENST00000495484	CAMSAP2	Q08AD1	1489 aa		13.86	□□□□□ -0.19
PCDH15-223	ENST00000495484	CDC42BPA	Q5VT25	1732 aa		13.85	□□□□□ -0.19
PCDH15-223	ENST00000495484	FAM69C	Q0P6D2	419 aa		13.85	□□□□□ -0.19
PCDH15-223	ENST00000495484	KIAA1107	Q9UPP5	1409 aa		13.85	□□□□□ -0.19
PCDH15-223	ENST00000495484	GLI2	P10070	1586 aa		13.84	□□□□□ -0.19
PCDH15-223	ENST00000495484	MYO5C	Q9NQX4	1742 aa		13.84	□□□□□ -0.19
PCDH15-223	ENST00000495484	FANCA	O15360	1455 aa		13.83	□□□□□ -0.2
PCDH15-223	ENST00000495484	TSPY4	P0CV99	314 aa		13.82	□□□□□ -0.2
PCDH15-223	ENST00000495484	TSPY10	P0CW01	314 aa		13.82	□□□□□ -0.2
PCDH15-223	ENST00000495484	HNRNPM	P52272	730 aa	Known RBP eCLIP	13.82	□□□□□ -0.2
PCDH15-223	ENST00000495484	DAPK1	P53355	1430 aa		13.82	□□□□□ -0.2
PCDH15-223	ENST00000495484	CDC42BPB	Q9Y5S2	1711 aa		13.81	□□□□□ -0.2
PCDH15-223	ENST00000495484	ABCC5	O15440	1437 aa		13.81	□□□□□ -0.2
PCDH15-223	ENST00000495484	PTPRK	Q15262	1439 aa		13.79	□□□□□ -0.2
PCDH15-223	ENST00000495484	ROCK1	Q13464	1354 aa		13.79	□□□□□ -0.2
PCDH15-223	ENST00000495484	MBD5	Q9P267	1494 aa		13.79	□□□□□ -0.2
PCDH15-223	ENST00000495484	DIP2B	Q9P265	1576 aa		13.79	□□□□□ -0.2
PCDH15-223	ENST00000495484	SAMD9L	Q8IVG5	1584 aa		13.78	□□□□□ -0.2
PCDH15-223	ENST00000495484	DNMT1	P26358	1616 aa	Known RBP	13.78	□□□□□ -0.2
PCDH15-223	ENST00000495484	AKNA	Q7Z591	1439 aa		13.78	□□□□□ -0.2
PCDH15-223	ENST00000495484	ARHGEF5	Q12774	1597 aa		13.78	□□□□□ -0.2
PCDH15-223	ENST00000495484	CCDC141	Q6ZP82	1450 aa		13.78	□□□□□ -0.2
PCDH15-223	ENST00000495484	NEO1	Q92859	1461 aa		13.78	□□□□□ -0.2
PCDH15-223	ENST00000495484	HRC	P23327	699 aa		13.78	□□□□□ -0.2
PCDH15-223	ENST00000495484	CHIC2	Q9UKJ5	165 aa		13.78	□□□□□ -0.2
PCDH15-223	ENST00000495484	SHANK2	Q9UPX8	1470 aa		13.77	□□□□□ -0.21
PCDH15-223	ENST00000495484	SETD5	Q9C0A6	1442 aa		13.76	□□□□□ -0.21
PCDH15-223	ENST00000495484	ACIN1	Q9UKV3	1341 aa	Known RBP	13.76	□□□□□ -0.21
PCDH15-223	ENST00000495484	HFM1	A2PYH4	1435 aa		13.76	□□□□□ -0.21
PCDH15-223	ENST00000495484	CFAP74	Q9C0B2	1584 aa		13.76	□□□□□ -0.21
PCDH15-223	ENST00000495484	MAP3K4	Q9Y6R4	1608 aa		13.75	□□□□□ -0.21
PCDH15-223	ENST00000495484	ADGRL1	O94910	1474 aa		13.75	□□□□□ -0.21
PCDH15-223	ENST00000495484	ANKRD30A	Q9BXX3	1397 aa		13.75	□□□□□ -0.21
PCDH15-223	ENST00000495484	SCAPER	Q9BY12	1400 aa		13.75	□□□□□ -0.21
PCDH15-223	ENST00000495484	TEX14	Q8IWB6	1497 aa		13.75	□□□□□ -0.21
PCDH15-223	ENST00000495484	ABCC1	P33527	1531 aa		13.75	□□□□□ -0.21
PCDH15-223	ENST00000495484	SYCP2	Q9BX26	1530 aa		13.75	□□□□□ -0.21
PCDH15-223	ENST00000495484	C9orf84	Q5VXU9	1444 aa		13.74	□□□□□ -0.21
PCDH15-223	ENST00000495484	ARHGEF12	Q9NZN5	1544 aa		13.73	□□□□□ -0.21
PCDH15-223	ENST00000495484	RRP7BP	Q9NSQ0	103 aa		13.73	□□□□□ -0.21
PCDH15-223	ENST00000495484	NCOA1	Q15788	1441 aa		13.73	□□□□□ -0.21
PCDH15-223	ENST00000495484	ADGRL2	O95490	1459 aa		13.73	□□□□□ -0.21
PCDH15-223	ENST00000495484	NAIP	Q13075	1403 aa		13.72	□□□□□ -0.21
PCDH15-223	ENST00000495484	SPAG9	O60271	1321 aa	Known RBP	13.72	□□□□□ -0.21
PCDH15-223	ENST00000495484	RAB3GAP2	Q9H2M9	1393 aa		13.71	□□□□□ -0.21
PCDH15-223	ENST00000495484	TRAPPC8	Q9Y2L5	1435 aa		13.71	□□□□□ -0.21
PCDH15-223	ENST00000495484	AFAP1	Q8N556	730 aa		13.71	□□□□□ -0.21
PCDH15-223	ENST00000495484	RTEL1-TNFRSF6B	F6WH68	1400 aa		13.71	□□□□□ -0.22
PCDH15-223	ENST00000495484	TRH	P20396	242 aa	Predicted RBP	13.7	□□□□□ -0.22
PCDH15-223	ENST00000495484	ZNF518A	Q6AHZ1	1483 aa		13.7	□□□□□ -0.22
PCDH15-223	ENST00000495484	DENND4B	O75064	1496 aa	Predicted RBP	13.69	□□□□□ -0.22
PCDH15-223	ENST00000495484	MAST1	Q9Y2H9	1570 aa		13.68	□□□□□ -0.22
PCDH15-223	ENST00000495484	CROCC2	H7BZ55	1655 aa		13.68	□□□□□ -0.22
PCDH15-223	ENST00000495484	POGZ	Q7Z3K3	1410 aa		13.67	□□□□□ -0.22
PCDH15-223	ENST00000495484	KIF15	Q9NS87	1388 aa		13.66	□□□□□ -0.22
PCDH15-223	ENST00000495484	CCER1	Q8TC90	406 aa	Predicted RBP	13.66	□□□□□ -0.22
PCDH15-223	ENST00000495484	MYT1L	Q9UL68	1186 aa		13.66	□□□□□ -0.22
PCDH15-223	ENST00000495484	ANKRD50	Q9ULJ7	1429 aa		13.65	□□□□□ -0.22
PCDH15-223	ENST00000495484	KIF13A	Q9H1H9	1805 aa		13.64	□□□□□ -0.23
PCDH15-223	ENST00000495484	RAPGEF3	O95398	923 aa		13.64	□□□□□ -0.23
PCDH15-223	ENST00000495484	ADGB	Q8N7X0	1667 aa		13.64	□□□□□ -0.23
PCDH15-223	ENST00000495484	MLH3	Q9UHC1	1453 aa		13.63	□□□□□ -0.23
PCDH15-223	ENST00000495484	PLXNC1	O60486	1568 aa		13.61	□□□□□ -0.23
PCDH15-223	ENST00000495484	KDM5C	P41229	1560 aa		13.61	□□□□□ -0.23
PCDH15-223	ENST00000495484	GCC2	Q8IWJ2	1684 aa		13.61	□□□□□ -0.23
PCDH15-223	ENST00000495484	PPRC1	Q5VV67	1664 aa	Known RBP	13.61	□□□□□ -0.23
PCDH15-223	ENST00000495484	TRIM52	Q96A61	297 aa		13.61	□□□□□ -0.23
PCDH15-223	ENST00000495484	ATP7A	Q04656	1500 aa		13.6	□□□□□ -0.23
PCDH15-223	ENST00000495484	ZFYVE16	Q7Z3T8	1539 aa		13.6	□□□□□ -0.23
PCDH15-223	ENST00000495484	DUOX2	Q9NRD8	1548 aa		13.6	□□□□□ -0.23
PCDH15-223	ENST00000495484	ERBIN	Q96RT1	1412 aa		13.6	□□□□□ -0.23
PCDH15-223	ENST00000495484	CLSPN	Q9HAW4	1339 aa		13.6	□□□□□ -0.23
PCDH15-223	ENST00000495484	TSPOAP1	O95153	1857 aa		13.59	□□□□□ -0.23
PCDH15-223	ENST00000495484	MAGI2	Q86UL8	1455 aa		13.59	□□□□□ -0.23
PCDH15-223	ENST00000495484	DHX57	Q6P158	1386 aa	Known RBP	13.59	□□□□□ -0.23
PCDH15-223	ENST00000495484	DHX29	Q7Z478	1369 aa	Known RBP	13.59	□□□□□ -0.23
PCDH15-223	ENST00000495484	INO80	Q9ULG1	1556 aa	Predicted RBP	13.59	□□□□□ -0.23
PCDH15-223	ENST00000495484	ZEB1	P37275	1124 aa	Predicted RBP	13.57	□□□□□ -0.24
PCDH15-223	ENST00000495484	HECW2	Q9P2P5	1572 aa		13.56	□□□□□ -0.24
PCDH15-223	ENST00000495484	ZMYM4	Q5VZL5	1548 aa		13.55	□□□□□ -0.24
PCDH15-223	ENST00000495484	RICTOR	Q6R327	1708 aa		13.54	□□□□□ -0.24
PCDH15-223	ENST00000495484	MPHOSPH9	Q99550	1183 aa		13.54	□□□□□ -0.24
PCDH15-223	ENST00000495484	NUP155	O75694	1391 aa		13.54	□□□□□ -0.24
PCDH15-223	ENST00000495484	A2M	P01023	1474 aa		13.54	□□□□□ -0.24
PCDH15-223	ENST00000495484	KIDINS220	Q9ULH0	1771 aa		13.54	□□□□□ -0.24
PCDH15-223	ENST00000495484	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.53	□□□□□ -0.24
PCDH15-223	ENST00000495484	COL17A1	Q9UMD9	1497 aa	Predicted RBP	13.53	□□□□□ -0.24
PCDH15-223	ENST00000495484	KDM6B	O15054	1643 aa		13.53	□□□□□ -0.24
PCDH15-223	ENST00000495484	FRMPD1	Q5SYB0	1578 aa		13.52	□□□□□ -0.25
PCDH15-223	ENST00000495484	KIF3B	O15066	747 aa		13.52	□□□□□ -0.25
PCDH15-223	ENST00000495484	ATP10A	O60312	1499 aa		13.5	□□□□□ -0.25
PCDH15-223	ENST00000495484	YEATS2	Q9ULM3	1422 aa		13.5	□□□□□ -0.25

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