RNA–Protein interactions for RNA: ENST00000495400.1

PTPN18-216, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-216ENST00000495400 YEATS2Q9ULM3 1422 aa24.23■■□□□ 1.47
PTPN18-216ENST00000495400 RIMS1Q86UR5 1692 aaKnown RBP24.23■■□□□ 1.47
PTPN18-216ENST00000495400 POGZQ7Z3K3 1410 aa24.22■■□□□ 1.47
PTPN18-216ENST00000495400 TROQ12816 1431 aaPredicted RBP24.21■■□□□ 1.47
PTPN18-216ENST00000495400 LRRIQ1Q96JM4 1722 aa24.21■■□□□ 1.47
PTPN18-216ENST00000495400 KIF14Q15058 1648 aa24.21■■□□□ 1.47
PTPN18-216ENST00000495400 SIGLEC1Q9BZZ2 1709 aa24.19■■□□□ 1.46
PTPN18-216ENST00000495400 CLIP1P30622 1438 aa24.18■■□□□ 1.46
PTPN18-216ENST00000495400 PCF11O94913 1555 aaKnown RBP24.15■■□□□ 1.46
PTPN18-216ENST00000495400 ARHGAP5Q13017 1502 aa24.13■■□□□ 1.45
PTPN18-216ENST00000495400 ATP10AO60312 1499 aa24.13■■□□□ 1.45
PTPN18-216ENST00000495400 LMTK3Q96Q04 1460 aa24.12■■□□□ 1.45
PTPN18-216ENST00000495400 CASKIN1Q8WXD9 1431 aa24.11■■□□□ 1.45
PTPN18-216ENST00000495400 MLECQ14165 292 aa24.11■■□□□ 1.45
PTPN18-216ENST00000495400 CCDC18Q5T9S5 1454 aa24.1■■□□□ 1.45
PTPN18-216ENST00000495400 ZNF518AQ6AHZ1 1483 aa24.1■■□□□ 1.45
PTPN18-216ENST00000495400 FER1L4A9Z1Z3 1794 aa24.1■■□□□ 1.45
PTPN18-216ENST00000495400 C9orf84Q5VXU9 1444 aa24.1■■□□□ 1.45
PTPN18-216ENST00000495400 CDC42BPBQ9Y5S2 1711 aa24.09■■□□□ 1.45
PTPN18-216ENST00000495400 PLPPR3Q6T4P5 718 aa24.08■■□□□ 1.45
PTPN18-216ENST00000495400 AFAP1Q8N556 730 aa24.06■■□□□ 1.44
PTPN18-216ENST00000495400 KDM5CP41229 1560 aa24.06■■□□□ 1.44
PTPN18-216ENST00000495400 ARHGEF12Q9NZN5 1544 aa24.04■■□□□ 1.44
PTPN18-216ENST00000495400 PREX2Q70Z35 1606 aa24.03■■□□□ 1.44
PTPN18-216ENST00000495400 MYT1LQ9UL68 1186 aa24.02■■□□□ 1.44
PTPN18-216ENST00000495400 FYCO1Q9BQS8 1478 aa24.01■■□□□ 1.43
PTPN18-216ENST00000495400 HSPA2P54652 639 aa23.99■■□□□ 1.43
PTPN18-216ENST00000495400 FBXO41Q8TF61 875 aa23.98■■□□□ 1.43
PTPN18-216ENST00000495400 DIP2CQ9Y2E4 1556 aa23.98■■□□□ 1.43
PTPN18-216ENST00000495400 CDC42BPAQ5VT25 1732 aa23.98■■□□□ 1.43
PTPN18-216ENST00000495400 ABCC1P33527 1531 aa23.97■■□□□ 1.43
PTPN18-216ENST00000495400 ITSN2Q9NZM3 1697 aa23.97■■□□□ 1.43
PTPN18-216ENST00000495400 MLH3Q9UHC1 1453 aa23.97■■□□□ 1.43
PTPN18-216ENST00000495400 REREQ9P2R6 1566 aa23.95■■□□□ 1.43
PTPN18-216ENST00000495400 TRAPPC8Q9Y2L5 1435 aa23.95■■□□□ 1.42
PTPN18-216ENST00000495400 ABCA6Q8N139 1617 aa23.94■■□□□ 1.42
PTPN18-216ENST00000495400 CEBPAP49715 358 aaPredicted RBP23.92■■□□□ 1.42
PTPN18-216ENST00000495400 PREX1Q8TCU6 1659 aa23.91■■□□□ 1.42
PTPN18-216ENST00000495400 AGLP35573 1532 aa23.89■■□□□ 1.41
PTPN18-216ENST00000495400 KIDINS220Q9ULH0 1771 aa23.88■■□□□ 1.41
PTPN18-216ENST00000495400 ZNF777Q9ULD5 760 aaPredicted RBP23.88■■□□□ 1.41
PTPN18-216ENST00000495400 SETD1BQ9UPS6 1966 aaKnown RBP23.88■■□□□ 1.41
PTPN18-216ENST00000495400 GPATCH8Q9UKJ3 1502 aaKnown RBP23.86■■□□□ 1.41
PTPN18-216ENST00000495400 SAMD9LQ8IVG5 1584 aa23.86■■□□□ 1.41
PTPN18-216ENST00000495400 ESF1Q9H501 851 aaKnown RBP23.82■■□□□ 1.4
PTPN18-216ENST00000495400 SYCP2Q9BX26 1530 aa23.82■■□□□ 1.4
PTPN18-216ENST00000495400 C3P01024 1663 aa23.81■■□□□ 1.4
PTPN18-216ENST00000495400 HNRNPMP52272 730 aaKnown RBP eCLIP23.8■■□□□ 1.4
PTPN18-216ENST00000495400 MTUS2Q5JR59 1369 aa23.79■■□□□ 1.4
PTPN18-216ENST00000495400 CCNB3Q8WWL7 1395 aa23.79■■□□□ 1.4
PTPN18-216ENST00000495400 UHRF1BP1Q6BDS2 1440 aa23.79■■□□□ 1.4
PTPN18-216ENST00000495400 CFDP1Q9UEE9 299 aaPredicted RBP23.79■■□□□ 1.4
PTPN18-216ENST00000495400 SPAG9O60271 1321 aaKnown RBP23.79■■□□□ 1.4
PTPN18-216ENST00000495400 KIAA1107Q9UPP5 1409 aa23.77■■□□□ 1.4
PTPN18-216ENST00000495400 PLEKHH2Q8IVE3 1493 aa23.77■■□□□ 1.4
PTPN18-216ENST00000495400 STRCQ7RTU9 1775 aa23.75■■□□□ 1.39
PTPN18-216ENST00000495400 CNTLNQ9NXG0 1405 aa23.75■■□□□ 1.39
PTPN18-216ENST00000495400 CERKQ8TCT0 537 aa23.74■■□□□ 1.39
PTPN18-216ENST00000495400 DMRT2Q9Y5R5 561 aa23.73■■□□□ 1.39
PTPN18-216ENST00000495400 ATP7AQ04656 1500 aa23.73■■□□□ 1.39
PTPN18-216ENST00000495400 SUPT6HQ7KZ85 1726 aaKnown RBP23.73■■□□□ 1.39
PTPN18-216ENST00000495400 INO80Q9ULG1 1556 aaPredicted RBP23.7■■□□□ 1.38
PTPN18-216ENST00000495400 EHBP1L1Q8N3D4 1523 aa23.7■■□□□ 1.38
PTPN18-216ENST00000495400 CEP162Q5TB80 1403 aa23.69■■□□□ 1.38
PTPN18-216ENST00000495400 MROH2AA6NES4 1674 aa23.69■■□□□ 1.38
PTPN18-216ENST00000495400 TIAM1Q13009 1591 aa23.69■■□□□ 1.38
PTPN18-216ENST00000495400 A2MP01023 1474 aa23.67■■□□□ 1.38
PTPN18-216ENST00000495400 PLXNC1O60486 1568 aa23.65■■□□□ 1.38
PTPN18-216ENST00000495400 ZNF644Q9H582 1327 aaPredicted RBP23.65■■□□□ 1.38
PTPN18-216ENST00000495400 ZMYM3Q14202 1370 aa23.64■■□□□ 1.37
PTPN18-216ENST00000495400 ADGBQ8N7X0 1667 aa23.64■■□□□ 1.37
PTPN18-216ENST00000495400 NPATQ14207 1427 aa23.63■■□□□ 1.37
PTPN18-216ENST00000495400 CLTCQ00610 1675 aaKnown RBP23.62■■□□□ 1.37
PTPN18-216ENST00000495400 MBD5Q9P267 1494 aa23.62■■□□□ 1.37
PTPN18-216ENST00000495400 PTPRTO14522 1441 aa23.61■■□□□ 1.37
PTPN18-216ENST00000495400 GGT6Q6P531 493 aa23.59■■□□□ 1.37
PTPN18-216ENST00000495400 RTEL1-TNFRSF6BF6WH68 1400 aa23.58■■□□□ 1.36
PTPN18-216ENST00000495400 PPP6R1Q9UPN7 881 aa23.57■■□□□ 1.36
PTPN18-216ENST00000495400 NCOA1Q15788 1441 aa23.56■■□□□ 1.36
PTPN18-216ENST00000495400 NCOA2Q15596 1464 aa23.56■■□□□ 1.36
PTPN18-216ENST00000495400 CAMSAP1Q5T5Y3 1602 aa23.53■■□□□ 1.36
PTPN18-216ENST00000495400 DHX29Q7Z478 1369 aaKnown RBP23.52■■□□□ 1.36
PTPN18-216ENST00000495400 PTPRKQ15262 1439 aa23.51■■□□□ 1.35
PTPN18-216ENST00000495400 CAMSAP2Q08AD1 1489 aa23.51■■□□□ 1.35
PTPN18-216ENST00000495400 RSPH4AQ5TD94 716 aa23.51■■□□□ 1.35
PTPN18-216ENST00000495400 CCDC141Q6ZP82 1450 aa23.5■■□□□ 1.35
PTPN18-216ENST00000495400 MYO3AQ8NEV4 1616 aa23.5■■□□□ 1.35
PTPN18-216ENST00000495400 ZNF142P52746 1687 aaPredicted RBP23.5■■□□□ 1.35
PTPN18-216ENST00000495400 LOC105371045A0A1W2PR82 267 aa23.47■■□□□ 1.35
PTPN18-216ENST00000495400 LTBP4Q8N2S1 1624 aa23.46■■□□□ 1.35
PTPN18-216ENST00000495400 VPS8Q8N3P4 1428 aa23.46■■□□□ 1.35
PTPN18-216ENST00000495400 CEP170BQ9Y4F5 1589 aaPredicted RBP23.45■■□□□ 1.34
PTPN18-216ENST00000495400 NCKAP5LQ9HCH0 1330 aa23.45■■□□□ 1.34
PTPN18-216ENST00000495400 KIF3BO15066 747 aa23.45■■□□□ 1.34
PTPN18-216ENST00000495400 ARHGEF5Q12774 1597 aa23.44■■□□□ 1.34
PTPN18-216ENST00000495400 PLA2R1Q13018 1463 aa23.43■■□□□ 1.34
PTPN18-216ENST00000495400 LRRC9Q6ZRR7 1453 aa23.43■■□□□ 1.34
PTPN18-216ENST00000495400 PKD2Q13563 968 aa23.42■■□□□ 1.34
PTPN18-216ENST00000495400 TSPY4P0CV99 314 aa23.41■■□□□ 1.34
PTPN18-216ENST00000495400 TSPY10P0CW01 314 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 294.9 ms