RNA–Protein interactions for RNA: ENST00000495363.5

SMIM11A-207, Transcript of small integral membrane protein 11A, humanhuman

TSL 5

Gene SMIM11A, Length 1,029 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-207ENST00000495363 VPS8Q8N3P4 1428 aa19.43■□□□□ 0.7
SMIM11A-207ENST00000495363 ZNF777Q9ULD5 760 aaPredicted RBP19.43■□□□□ 0.7
SMIM11A-207ENST00000495363 RICTORQ6R327 1708 aa19.41■□□□□ 0.7
SMIM11A-207ENST00000495363 MYT1LQ9UL68 1186 aa19.4■□□□□ 0.7
SMIM11A-207ENST00000495363 ARID4BQ4LE39 1312 aaPredicted RBP19.4■□□□□ 0.7
SMIM11A-207ENST00000495363 PREX2Q70Z35 1606 aa19.4■□□□□ 0.7
SMIM11A-207ENST00000495363 CDC42BPBQ9Y5S2 1711 aa19.39■□□□□ 0.7
SMIM11A-207ENST00000495363 POGZQ7Z3K3 1410 aa19.39■□□□□ 0.69
SMIM11A-207ENST00000495363 CCNB3Q8WWL7 1395 aa19.38■□□□□ 0.69
SMIM11A-207ENST00000495363 EHBP1L1Q8N3D4 1523 aa19.37■□□□□ 0.69
SMIM11A-207ENST00000495363 AFAP1Q8N556 730 aa19.37■□□□□ 0.69
SMIM11A-207ENST00000495363 CDC42BPAQ5VT25 1732 aa19.37■□□□□ 0.69
SMIM11A-207ENST00000495363 GPATCH8Q9UKJ3 1502 aaKnown RBP19.36■□□□□ 0.69
SMIM11A-207ENST00000495363 CFDP1Q9UEE9 299 aaPredicted RBP19.36■□□□□ 0.69
SMIM11A-207ENST00000495363 YEATS2Q9ULM3 1422 aa19.35■□□□□ 0.69
SMIM11A-207ENST00000495363 TIAM1Q13009 1591 aa19.34■□□□□ 0.69
SMIM11A-207ENST00000495363 ZMYM4Q5VZL5 1548 aa19.34■□□□□ 0.69
SMIM11A-207ENST00000495363 ZFYVE16Q7Z3T8 1539 aa19.34■□□□□ 0.69
SMIM11A-207ENST00000495363 ARHGEF40Q8TER5 1519 aa19.33■□□□□ 0.68
SMIM11A-207ENST00000495363 ZNF518AQ6AHZ1 1483 aa19.32■□□□□ 0.68
SMIM11A-207ENST00000495363 APLP2Q06481 763 aa19.31■□□□□ 0.68
SMIM11A-207ENST00000495363 ABCC1P33527 1531 aa19.3■□□□□ 0.68
SMIM11A-207ENST00000495363 ARHGEF12Q9NZN5 1544 aa19.3■□□□□ 0.68
SMIM11A-207ENST00000495363 MAGI2Q86UL8 1455 aa19.3■□□□□ 0.68
SMIM11A-207ENST00000495363 TRAPPC8Q9Y2L5 1435 aa19.3■□□□□ 0.68
SMIM11A-207ENST00000495363 HNRNPMP52272 730 aaKnown RBP eCLIP19.29■□□□□ 0.68
SMIM11A-207ENST00000495363 SAMD9LQ8IVG5 1584 aa19.28■□□□□ 0.68
SMIM11A-207ENST00000495363 KANK4Q5T7N3 995 aaPredicted RBP19.28■□□□□ 0.68
SMIM11A-207ENST00000495363 NCOA2Q15596 1464 aa19.28■□□□□ 0.68
SMIM11A-207ENST00000495363 ITSN2Q9NZM3 1697 aa19.27■□□□□ 0.68
SMIM11A-207ENST00000495363 MLECQ14165 292 aa19.27■□□□□ 0.68
SMIM11A-207ENST00000495363 SUPT6HQ7KZ85 1726 aaKnown RBP19.27■□□□□ 0.68
SMIM11A-207ENST00000495363 LRRC9Q6ZRR7 1453 aa19.27■□□□□ 0.67
SMIM11A-207ENST00000495363 SYCP2Q9BX26 1530 aa19.26■□□□□ 0.67
SMIM11A-207ENST00000495363 ZNF644Q9H582 1327 aaPredicted RBP19.25■□□□□ 0.67
SMIM11A-207ENST00000495363 KDM5CP41229 1560 aa19.25■□□□□ 0.67
SMIM11A-207ENST00000495363 ATP10AO60312 1499 aa19.24■□□□□ 0.67
SMIM11A-207ENST00000495363 HECW2Q9P2P5 1572 aa19.23■□□□□ 0.67
SMIM11A-207ENST00000495363 C9orf84Q5VXU9 1444 aa19.23■□□□□ 0.67
SMIM11A-207ENST00000495363 PLEKHH2Q8IVE3 1493 aa19.22■□□□□ 0.67
SMIM11A-207ENST00000495363 MAP3K1Q13233 1512 aa19.21■□□□□ 0.67
SMIM11A-207ENST00000495363 BCORL1Q5H9F3 1711 aa19.21■□□□□ 0.67
SMIM11A-207ENST00000495363 PLPPR3Q6T4P5 718 aa19.21■□□□□ 0.67
SMIM11A-207ENST00000495363 MLH3Q9UHC1 1453 aa19.21■□□□□ 0.67
SMIM11A-207ENST00000495363 SPAG9O60271 1321 aaKnown RBP19.21■□□□□ 0.67
SMIM11A-207ENST00000495363 KIAA1107Q9UPP5 1409 aa19.2■□□□□ 0.66
SMIM11A-207ENST00000495363 SIGLEC1Q9BZZ2 1709 aa19.2■□□□□ 0.66
SMIM11A-207ENST00000495363 ADAMTSL3P82987 1691 aa19.19■□□□□ 0.66
SMIM11A-207ENST00000495363 DIP2CQ9Y2E4 1556 aa19.18■□□□□ 0.66
SMIM11A-207ENST00000495363 MADDQ8WXG6 1647 aa19.18■□□□□ 0.66
SMIM11A-207ENST00000495363 ABCA6Q8N139 1617 aa19.17■□□□□ 0.66
SMIM11A-207ENST00000495363 PTPRMP28827 1452 aa19.15■□□□□ 0.66
SMIM11A-207ENST00000495363 CAMSAP2Q08AD1 1489 aa19.15■□□□□ 0.66
SMIM11A-207ENST00000495363 KIDINS220Q9ULH0 1771 aa19.14■□□□□ 0.66
SMIM11A-207ENST00000495363 RIMS1Q86UR5 1692 aaKnown RBP19.13■□□□□ 0.65
SMIM11A-207ENST00000495363 ATP7AQ04656 1500 aa19.12■□□□□ 0.65
SMIM11A-207ENST00000495363 MBD5Q9P267 1494 aa19.12■□□□□ 0.65
SMIM11A-207ENST00000495363 MYOM3Q5VTT5 1437 aa19.1■□□□□ 0.65
SMIM11A-207ENST00000495363 REREQ9P2R6 1566 aa19.08■□□□□ 0.65
SMIM11A-207ENST00000495363 INO80Q9ULG1 1556 aaPredicted RBP19.08■□□□□ 0.65
SMIM11A-207ENST00000495363 CCDC141Q6ZP82 1450 aa19.08■□□□□ 0.64
SMIM11A-207ENST00000495363 FER1L4A9Z1Z3 1794 aa19.07■□□□□ 0.64
SMIM11A-207ENST00000495363 ESF1Q9H501 851 aaKnown RBP19.07■□□□□ 0.64
SMIM11A-207ENST00000495363 TSPY4P0CV99 314 aa19.06■□□□□ 0.64
SMIM11A-207ENST00000495363 TSPY10P0CW01 314 aa19.06■□□□□ 0.64
SMIM11A-207ENST00000495363 RSPH4AQ5TD94 716 aa19.06■□□□□ 0.64
SMIM11A-207ENST00000495363 MIA2Q96PC5 1412 aa19.05■□□□□ 0.64
SMIM11A-207ENST00000495363 A2MP01023 1474 aa19.04■□□□□ 0.64
SMIM11A-207ENST00000495363 AGLP35573 1532 aa19.04■□□□□ 0.64
SMIM11A-207ENST00000495363 CEBPAP49715 358 aaPredicted RBP19.03■□□□□ 0.64
SMIM11A-207ENST00000495363 RTEL1-TNFRSF6BF6WH68 1400 aa19.02■□□□□ 0.64
SMIM11A-207ENST00000495363 PPARGC1BQ86YN6 1023 aaKnown RBP19.02■□□□□ 0.64
SMIM11A-207ENST00000495363 GGT6Q6P531 493 aa19.01■□□□□ 0.63
SMIM11A-207ENST00000495363 ARHGEF5Q12774 1597 aa19.01■□□□□ 0.63
SMIM11A-207ENST00000495363 ADGBQ8N7X0 1667 aa18.98■□□□□ 0.63
SMIM11A-207ENST00000495363 PTPN23Q9H3S7 1636 aa18.98■□□□□ 0.63
SMIM11A-207ENST00000495363 FGD6Q6ZV73 1430 aa18.98■□□□□ 0.63
SMIM11A-207ENST00000495363 PLXNC1O60486 1568 aa18.97■□□□□ 0.63
SMIM11A-207ENST00000495363 DHX29Q7Z478 1369 aaKnown RBP18.96■□□□□ 0.63
SMIM11A-207ENST00000495363 FAM50AQ14320 339 aaKnown RBP18.96■□□□□ 0.63
SMIM11A-207ENST00000495363 KIF3BO15066 747 aa18.95■□□□□ 0.62
SMIM11A-207ENST00000495363 ABCC5O15440 1437 aa18.91■□□□□ 0.62
SMIM11A-207ENST00000495363 CNTLNQ9NXG0 1405 aa18.91■□□□□ 0.62
SMIM11A-207ENST00000495363 HSPA2P54652 639 aa18.91■□□□□ 0.62
SMIM11A-207ENST00000495363 CHIC2Q9UKJ5 165 aa18.91■□□□□ 0.62
SMIM11A-207ENST00000495363 TCOF1Q13428 1488 aaKnown RBP18.9■□□□□ 0.62
SMIM11A-207ENST00000495363 MAST1Q9Y2H9 1570 aa18.9■□□□□ 0.62
SMIM11A-207ENST00000495363 DAPK1P53355 1430 aa18.9■□□□□ 0.62
SMIM11A-207ENST00000495363 LMTK3Q96Q04 1460 aa18.9■□□□□ 0.62
SMIM11A-207ENST00000495363 C3P01024 1663 aa18.89■□□□□ 0.61
SMIM11A-207ENST00000495363 RRP7BPQ9NSQ0 103 aa18.88■□□□□ 0.61
SMIM11A-207ENST00000495363 ZMYM3Q14202 1370 aa18.88■□□□□ 0.61
SMIM11A-207ENST00000495363 CLTCQ00610 1675 aaKnown RBP18.88■□□□□ 0.61
SMIM11A-207ENST00000495363 DNMT1P26358 1616 aaKnown RBP18.86■□□□□ 0.61
SMIM11A-207ENST00000495363 SHANK2Q9UPX8 1470 aa18.85■□□□□ 0.61
SMIM11A-207ENST00000495363 PPP6R1Q9UPN7 881 aa18.85■□□□□ 0.61
SMIM11A-207ENST00000495363 CROCC2H7BZ55 1655 aa18.85■□□□□ 0.61
SMIM11A-207ENST00000495363 KIF15Q9NS87 1388 aa18.84■□□□□ 0.61
SMIM11A-207ENST00000495363 WASHC2CQ9Y4E1 1318 aa18.84■□□□□ 0.61
SMIM11A-207ENST00000495363 UHRF1BP1Q6BDS2 1440 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms