RNA–Protein interactions for RNA: ENST00000495341.5

LMNA-215, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 394 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-215ENST00000495341 POGZQ7Z3K3 1410 aa26.84■■□□□ 1.89
LMNA-215ENST00000495341 ADAMTSL3P82987 1691 aa26.84■■□□□ 1.89
LMNA-215ENST00000495341 ZFYVE16Q7Z3T8 1539 aa26.84■■□□□ 1.89
LMNA-215ENST00000495341 YEATS2Q9ULM3 1422 aa26.82■■□□□ 1.88
LMNA-215ENST00000495341 BCORL1Q5H9F3 1711 aa26.82■■□□□ 1.88
LMNA-215ENST00000495341 FYCO1Q9BQS8 1478 aa26.82■■□□□ 1.88
LMNA-215ENST00000495341 ARHGAP5Q13017 1502 aa26.82■■□□□ 1.88
LMNA-215ENST00000495341 PTPRMP28827 1452 aa26.81■■□□□ 1.88
LMNA-215ENST00000495341 MAGI2Q86UL8 1455 aa26.81■■□□□ 1.88
LMNA-215ENST00000495341 MADDQ8WXG6 1647 aa26.77■■□□□ 1.88
LMNA-215ENST00000495341 ZNF518AQ6AHZ1 1483 aa26.73■■□□□ 1.87
LMNA-215ENST00000495341 PREX2Q70Z35 1606 aa26.69■■□□□ 1.86
LMNA-215ENST00000495341 MYT1LQ9UL68 1186 aa26.69■■□□□ 1.86
LMNA-215ENST00000495341 CDC42BPBQ9Y5S2 1711 aa26.68■■□□□ 1.86
LMNA-215ENST00000495341 MLECQ14165 292 aa26.68■■□□□ 1.86
LMNA-215ENST00000495341 RIMS1Q86UR5 1692 aaKnown RBP26.68■■□□□ 1.86
LMNA-215ENST00000495341 SIGLEC1Q9BZZ2 1709 aa26.68■■□□□ 1.86
LMNA-215ENST00000495341 AFAP1Q8N556 730 aa26.67■■□□□ 1.86
LMNA-215ENST00000495341 ATP10AO60312 1499 aa26.67■■□□□ 1.86
LMNA-215ENST00000495341 C9orf84Q5VXU9 1444 aa26.66■■□□□ 1.86
LMNA-215ENST00000495341 KDM5CP41229 1560 aa26.65■■□□□ 1.86
LMNA-215ENST00000495341 PLPPR3Q6T4P5 718 aa26.63■■□□□ 1.85
LMNA-215ENST00000495341 ABCC1P33527 1531 aa26.62■■□□□ 1.85
LMNA-215ENST00000495341 CEP162Q5TB80 1403 aa26.62■■□□□ 1.85
LMNA-215ENST00000495341 CDC42BPAQ5VT25 1732 aa26.59■■□□□ 1.85
LMNA-215ENST00000495341 TRAPPC8Q9Y2L5 1435 aa26.58■■□□□ 1.85
LMNA-215ENST00000495341 ZNF777Q9ULD5 760 aaPredicted RBP26.58■■□□□ 1.85
LMNA-215ENST00000495341 ARHGEF12Q9NZN5 1544 aa26.58■■□□□ 1.85
LMNA-215ENST00000495341 MTUS2Q5JR59 1369 aa26.58■■□□□ 1.84
LMNA-215ENST00000495341 ITSN2Q9NZM3 1697 aa26.57■■□□□ 1.84
LMNA-215ENST00000495341 DIP2CQ9Y2E4 1556 aa26.55■■□□□ 1.84
LMNA-215ENST00000495341 FER1L4A9Z1Z3 1794 aa26.55■■□□□ 1.84
LMNA-215ENST00000495341 MLH3Q9UHC1 1453 aa26.55■■□□□ 1.84
LMNA-215ENST00000495341 GPATCH8Q9UKJ3 1502 aaKnown RBP26.54■■□□□ 1.84
LMNA-215ENST00000495341 ABCA6Q8N139 1617 aa26.52■■□□□ 1.84
LMNA-215ENST00000495341 CCNB3Q8WWL7 1395 aa26.52■■□□□ 1.84
LMNA-215ENST00000495341 LMTK3Q96Q04 1460 aa26.52■■□□□ 1.84
LMNA-215ENST00000495341 SAMD9LQ8IVG5 1584 aa26.5■■□□□ 1.83
LMNA-215ENST00000495341 SYCP2Q9BX26 1530 aa26.49■■□□□ 1.83
LMNA-215ENST00000495341 CFDP1Q9UEE9 299 aaPredicted RBP26.49■■□□□ 1.83
LMNA-215ENST00000495341 REREQ9P2R6 1566 aa26.48■■□□□ 1.83
LMNA-215ENST00000495341 EHBP1L1Q8N3D4 1523 aa26.47■■□□□ 1.83
LMNA-215ENST00000495341 HNRNPMP52272 730 aaKnown RBP eCLIP26.45■■□□□ 1.82
LMNA-215ENST00000495341 ILDR1Q86SU0 546 aaPredicted RBP26.44■■□□□ 1.82
LMNA-215ENST00000495341 PLEKHH2Q8IVE3 1493 aa26.43■■□□□ 1.82
LMNA-215ENST00000495341 KIDINS220Q9ULH0 1771 aa26.43■■□□□ 1.82
LMNA-215ENST00000495341 LOC105371045A0A1W2PR82 267 aa26.42■■□□□ 1.82
LMNA-215ENST00000495341 SPAG9O60271 1321 aaKnown RBP26.41■■□□□ 1.82
LMNA-215ENST00000495341 HSPA2P54652 639 aa26.41■■□□□ 1.82
LMNA-215ENST00000495341 KIAA1107Q9UPP5 1409 aa26.4■■□□□ 1.82
LMNA-215ENST00000495341 AGLP35573 1532 aa26.4■■□□□ 1.82
LMNA-215ENST00000495341 CEBPAP49715 358 aaPredicted RBP26.4■■□□□ 1.82
LMNA-215ENST00000495341 TIAM1Q13009 1591 aa26.4■■□□□ 1.82
LMNA-215ENST00000495341 ESF1Q9H501 851 aaKnown RBP26.38■■□□□ 1.81
LMNA-215ENST00000495341 ATP7AQ04656 1500 aa26.34■■□□□ 1.81
LMNA-215ENST00000495341 ZNF644Q9H582 1327 aaPredicted RBP26.33■■□□□ 1.81
LMNA-215ENST00000495341 VPS8Q8N3P4 1428 aa26.31■■□□□ 1.8
LMNA-215ENST00000495341 INO80Q9ULG1 1556 aaPredicted RBP26.31■■□□□ 1.8
LMNA-215ENST00000495341 PREX1Q8TCU6 1659 aa26.3■■□□□ 1.8
LMNA-215ENST00000495341 NCOA2Q15596 1464 aa26.3■■□□□ 1.8
LMNA-215ENST00000495341 SUPT6HQ7KZ85 1726 aaKnown RBP26.29■■□□□ 1.8
LMNA-215ENST00000495341 UHRF1BP1Q6BDS2 1440 aa26.27■■□□□ 1.8
LMNA-215ENST00000495341 A2MP01023 1474 aa26.26■■□□□ 1.79
LMNA-215ENST00000495341 CNTLNQ9NXG0 1405 aa26.26■■□□□ 1.79
LMNA-215ENST00000495341 C3P01024 1663 aa26.25■■□□□ 1.79
LMNA-215ENST00000495341 MBD5Q9P267 1494 aa26.24■■□□□ 1.79
LMNA-215ENST00000495341 PLXNC1O60486 1568 aa26.23■■□□□ 1.79
LMNA-215ENST00000495341 CAMSAP2Q08AD1 1489 aa26.22■■□□□ 1.79
LMNA-215ENST00000495341 LRRC9Q6ZRR7 1453 aa26.2■■□□□ 1.78
LMNA-215ENST00000495341 CCDC141Q6ZP82 1450 aa26.18■■□□□ 1.78
LMNA-215ENST00000495341 RTEL1-TNFRSF6BF6WH68 1400 aa26.17■■□□□ 1.78
LMNA-215ENST00000495341 GGT6Q6P531 493 aa26.17■■□□□ 1.78
LMNA-215ENST00000495341 ADGBQ8N7X0 1667 aa26.17■■□□□ 1.78
LMNA-215ENST00000495341 FBXO41Q8TF61 875 aa26.15■■□□□ 1.78
LMNA-215ENST00000495341 MROH2AA6NES4 1674 aa26.15■■□□□ 1.78
LMNA-215ENST00000495341 ZMYM3Q14202 1370 aa26.14■■□□□ 1.78
LMNA-215ENST00000495341 SETD1BQ9UPS6 1966 aaKnown RBP26.13■■□□□ 1.77
LMNA-215ENST00000495341 MAP3K1Q13233 1512 aa26.11■■□□□ 1.77
LMNA-215ENST00000495341 KANK4Q5T7N3 995 aaPredicted RBP26.11■■□□□ 1.77
LMNA-215ENST00000495341 RSPH4AQ5TD94 716 aa26.11■■□□□ 1.77
LMNA-215ENST00000495341 CLTCQ00610 1675 aaKnown RBP26.11■■□□□ 1.77
LMNA-215ENST00000495341 NPATQ14207 1427 aa26.1■■□□□ 1.77
LMNA-215ENST00000495341 DHX29Q7Z478 1369 aaKnown RBP26.09■■□□□ 1.77
LMNA-215ENST00000495341 ARHGEF5Q12774 1597 aa26.07■■□□□ 1.76
LMNA-215ENST00000495341 DMRT2Q9Y5R5 561 aa26.07■■□□□ 1.76
LMNA-215ENST00000495341 TSPY4P0CV99 314 aa26.06■■□□□ 1.76
LMNA-215ENST00000495341 TSPY10P0CW01 314 aa26.06■■□□□ 1.76
LMNA-215ENST00000495341 PPP6R1Q9UPN7 881 aa26.05■■□□□ 1.76
LMNA-215ENST00000495341 APLP2Q06481 763 aa26.04■■□□□ 1.76
LMNA-215ENST00000495341 STRCQ7RTU9 1775 aa26.04■■□□□ 1.76
LMNA-215ENST00000495341 KIF3BO15066 747 aa26.03■■□□□ 1.76
LMNA-215ENST00000495341 MYOM3Q5VTT5 1437 aa26.03■■□□□ 1.76
LMNA-215ENST00000495341 PTPRKQ15262 1439 aa26■■□□□ 1.75
LMNA-215ENST00000495341 CERKQ8TCT0 537 aa26■■□□□ 1.75
LMNA-215ENST00000495341 MIA2Q96PC5 1412 aa25.99■■□□□ 1.75
LMNA-215ENST00000495341 NCOA1Q15788 1441 aa25.97■■□□□ 1.75
LMNA-215ENST00000495341 MYO3AQ8NEV4 1616 aa25.96■■□□□ 1.75
LMNA-215ENST00000495341 PTPRTO14522 1441 aa25.96■■□□□ 1.75
LMNA-215ENST00000495341 CAMSAP1Q5T5Y3 1602 aa25.96■■□□□ 1.75
LMNA-215ENST00000495341 KDM5DQ9BY66 1539 aa25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms