RNA–Protein interactions for RNA: ENST00000495288.5

PSMB4-206, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 986 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-206ENST00000495288 DNAJC5Q9H3Z4 198 aa26.28■■□□□ 1.8
PSMB4-206ENST00000495288 PLCH2O75038 1416 aa26.28■■□□□ 1.8
PSMB4-206ENST00000495288 MAPKBP1O60336 1514 aa26.27■■□□□ 1.8
PSMB4-206ENST00000495288 PREX2Q70Z35 1606 aa26.27■■□□□ 1.8
PSMB4-206ENST00000495288 MYO5CQ9NQX4 1742 aa26.26■■□□□ 1.79
PSMB4-206ENST00000495288 CHIC2Q9UKJ5 165 aa26.26■■□□□ 1.79
PSMB4-206ENST00000495288 CDC42BPBQ9Y5S2 1711 aa26.25■■□□□ 1.79
PSMB4-206ENST00000495288 HNRNPMP52272 730 aaKnown RBP eCLIP26.24■■□□□ 1.79
PSMB4-206ENST00000495288 PTPRKQ15262 1439 aa26.22■■□□□ 1.79
PSMB4-206ENST00000495288 ABCA9Q8IUA7 1624 aa26.22■■□□□ 1.79
PSMB4-206ENST00000495288 ABCC5O15440 1437 aa26.19■■□□□ 1.78
PSMB4-206ENST00000495288 DAPK1P53355 1430 aa26.19■■□□□ 1.78
PSMB4-206ENST00000495288 CD109Q6YHK3 1445 aa26.18■■□□□ 1.78
PSMB4-206ENST00000495288 FAM69CQ0P6D2 419 aa26.17■■□□□ 1.78
PSMB4-206ENST00000495288 SAMD9LQ8IVG5 1584 aa26.16■■□□□ 1.78
PSMB4-206ENST00000495288 DNMT1P26358 1616 aaKnown RBP26.15■■□□□ 1.78
PSMB4-206ENST00000495288 RRP7BPQ9NSQ0 103 aa26.15■■□□□ 1.78
PSMB4-206ENST00000495288 SETD5Q9C0A6 1442 aa26.14■■□□□ 1.78
PSMB4-206ENST00000495288 TSPY4P0CV99 314 aa26.14■■□□□ 1.78
PSMB4-206ENST00000495288 TSPY10P0CW01 314 aa26.14■■□□□ 1.78
PSMB4-206ENST00000495288 PLEKHH2Q8IVE3 1493 aa26.13■■□□□ 1.77
PSMB4-206ENST00000495288 RSPH4AQ5TD94 716 aa26.13■■□□□ 1.77
PSMB4-206ENST00000495288 ARAP3Q8WWN8 1544 aa26.13■■□□□ 1.77
PSMB4-206ENST00000495288 FANCAO15360 1455 aa26.11■■□□□ 1.77
PSMB4-206ENST00000495288 CCER1Q8TC90 406 aaPredicted RBP26.1■■□□□ 1.77
PSMB4-206ENST00000495288 KIAA1107Q9UPP5 1409 aa26.09■■□□□ 1.77
PSMB4-206ENST00000495288 MBD5Q9P267 1494 aa26.09■■□□□ 1.77
PSMB4-206ENST00000495288 SYCP2Q9BX26 1530 aa26.08■■□□□ 1.77
PSMB4-206ENST00000495288 RAB3GAP2Q9H2M9 1393 aa26.07■■□□□ 1.76
PSMB4-206ENST00000495288 GLI2P10070 1586 aa26.07■■□□□ 1.76
PSMB4-206ENST00000495288 AKNAQ7Z591 1439 aa26.07■■□□□ 1.76
PSMB4-206ENST00000495288 ARHGEF5Q12774 1597 aa26.06■■□□□ 1.76
PSMB4-206ENST00000495288 CCDC141Q6ZP82 1450 aa26.04■■□□□ 1.76
PSMB4-206ENST00000495288 ARHGEF12Q9NZN5 1544 aa26.04■■□□□ 1.76
PSMB4-206ENST00000495288 DIP2BQ9P265 1576 aa26.03■■□□□ 1.76
PSMB4-206ENST00000495288 ROCK1Q13464 1354 aa26.03■■□□□ 1.76
PSMB4-206ENST00000495288 HFM1A2PYH4 1435 aa26.03■■□□□ 1.76
PSMB4-206ENST00000495288 NAIPQ13075 1403 aa26.03■■□□□ 1.76
PSMB4-206ENST00000495288 ANKRD30AQ9BXX3 1397 aa26.02■■□□□ 1.76
PSMB4-206ENST00000495288 C9orf84Q5VXU9 1444 aa26.02■■□□□ 1.76
PSMB4-206ENST00000495288 ABCC1P33527 1531 aa26.02■■□□□ 1.76
PSMB4-206ENST00000495288 SCAPERQ9BY12 1400 aa26.01■■□□□ 1.75
PSMB4-206ENST00000495288 ADGRL1O94910 1474 aa26■■□□□ 1.75
PSMB4-206ENST00000495288 MAP3K4Q9Y6R4 1608 aa25.99■■□□□ 1.75
PSMB4-206ENST00000495288 TRAPPC8Q9Y2L5 1435 aa25.99■■□□□ 1.75
PSMB4-206ENST00000495288 HRCP23327 699 aa25.99■■□□□ 1.75
PSMB4-206ENST00000495288 AFAP1Q8N556 730 aa25.99■■□□□ 1.75
PSMB4-206ENST00000495288 CROCC2H7BZ55 1655 aa25.99■■□□□ 1.75
PSMB4-206ENST00000495288 SHANK2Q9UPX8 1470 aa25.98■■□□□ 1.75
PSMB4-206ENST00000495288 NCOA1Q15788 1441 aa25.97■■□□□ 1.75
PSMB4-206ENST00000495288 CFAP74Q9C0B2 1584 aa25.96■■□□□ 1.75
PSMB4-206ENST00000495288 MYT1LQ9UL68 1186 aa25.96■■□□□ 1.75
PSMB4-206ENST00000495288 SPAG9O60271 1321 aaKnown RBP25.95■■□□□ 1.75
PSMB4-206ENST00000495288 ADGRL2O95490 1459 aa25.95■■□□□ 1.74
PSMB4-206ENST00000495288 ADGBQ8N7X0 1667 aa25.94■■□□□ 1.74
PSMB4-206ENST00000495288 NEO1Q92859 1461 aa25.93■■□□□ 1.74
PSMB4-206ENST00000495288 TRIM52Q96A61 297 aa25.91■■□□□ 1.74
PSMB4-206ENST00000495288 GCC2Q8IWJ2 1684 aa25.9■■□□□ 1.74
PSMB4-206ENST00000495288 TRHP20396 242 aaPredicted RBP25.89■■□□□ 1.74
PSMB4-206ENST00000495288 TSPOAP1O95153 1857 aa25.89■■□□□ 1.73
PSMB4-206ENST00000495288 MAST1Q9Y2H9 1570 aa25.88■■□□□ 1.73
PSMB4-206ENST00000495288 KIF15Q9NS87 1388 aa25.88■■□□□ 1.73
PSMB4-206ENST00000495288 KIF13AQ9H1H9 1805 aa25.86■■□□□ 1.73
PSMB4-206ENST00000495288 DHX57Q6P158 1386 aaKnown RBP25.86■■□□□ 1.73
PSMB4-206ENST00000495288 TEX14Q8IWB6 1497 aa25.85■■□□□ 1.73
PSMB4-206ENST00000495288 KDM6BO15054 1643 aa25.85■■□□□ 1.73
PSMB4-206ENST00000495288 RAPGEF3O95398 923 aa25.84■■□□□ 1.73
PSMB4-206ENST00000495288 DENND4BO75064 1496 aaPredicted RBP25.84■■□□□ 1.73
PSMB4-206ENST00000495288 ANKRD50Q9ULJ7 1429 aa25.83■■□□□ 1.73
PSMB4-206ENST00000495288 RTEL1-TNFRSF6BF6WH68 1400 aa25.82■■□□□ 1.72
PSMB4-206ENST00000495288 POGZQ7Z3K3 1410 aa25.81■■□□□ 1.72
PSMB4-206ENST00000495288 ZNF518AQ6AHZ1 1483 aa25.81■■□□□ 1.72
PSMB4-206ENST00000495288 ACIN1Q9UKV3 1341 aaKnown RBP25.81■■□□□ 1.72
PSMB4-206ENST00000495288 ZEB1P37275 1124 aaPredicted RBP25.8■■□□□ 1.72
PSMB4-206ENST00000495288 PPRC1Q5VV67 1664 aaKnown RBP25.79■■□□□ 1.72
PSMB4-206ENST00000495288 ATP7AQ04656 1500 aa25.76■■□□□ 1.71
PSMB4-206ENST00000495288 PLXNC1O60486 1568 aa25.76■■□□□ 1.71
PSMB4-206ENST00000495288 ZFYVE16Q7Z3T8 1539 aa25.74■■□□□ 1.71
PSMB4-206ENST00000495288 DUOX2Q9NRD8 1548 aa25.73■■□□□ 1.71
PSMB4-206ENST00000495288 INO80Q9ULG1 1556 aaPredicted RBP25.71■■□□□ 1.71
PSMB4-206ENST00000495288 MPHOSPH9Q99550 1183 aa25.71■■□□□ 1.71
PSMB4-206ENST00000495288 KDM5CP41229 1560 aa25.69■■□□□ 1.7
PSMB4-206ENST00000495288 MLH3Q9UHC1 1453 aa25.69■■□□□ 1.7
PSMB4-206ENST00000495288 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.69■■□□□ 1.7
PSMB4-206ENST00000495288 CLSPNQ9HAW4 1339 aa25.68■■□□□ 1.7
PSMB4-206ENST00000495288 SLC4A1APQ9BWU0 796 aaKnown RBP25.67■■□□□ 1.7
PSMB4-206ENST00000495288 NUP155O75694 1391 aa25.67■■□□□ 1.7
PSMB4-206ENST00000495288 KIDINS220Q9ULH0 1771 aa25.67■■□□□ 1.7
PSMB4-206ENST00000495288 RICTORQ6R327 1708 aa25.66■■□□□ 1.7
PSMB4-206ENST00000495288 HECW2Q9P2P5 1572 aa25.65■■□□□ 1.7
PSMB4-206ENST00000495288 ERBINQ96RT1 1412 aa25.65■■□□□ 1.7
PSMB4-206ENST00000495288 DHX29Q7Z478 1369 aaKnown RBP25.65■■□□□ 1.7
PSMB4-206ENST00000495288 KIF3BO15066 747 aa25.62■■□□□ 1.69
PSMB4-206ENST00000495288 FRMPD1Q5SYB0 1578 aa25.61■■□□□ 1.69
PSMB4-206ENST00000495288 A2MP01023 1474 aa25.6■■□□□ 1.69
PSMB4-206ENST00000495288 COL17A1Q9UMD9 1497 aaPredicted RBP25.6■■□□□ 1.69
PSMB4-206ENST00000495288 NEUROD1Q13562 356 aa25.58■■□□□ 1.69
PSMB4-206ENST00000495288 FOXD1Q16676 465 aa25.58■■□□□ 1.69
PSMB4-206ENST00000495288 PZPP20742 1482 aa25.58■■□□□ 1.69
PSMB4-206ENST00000495288 SIN3AQ96ST3 1273 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms