RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 PREX2Q70Z35 1606 aa18.87■□□□□ 0.61
CSNK1E-213ENST00000495232 CDC42BPAQ5VT25 1732 aa18.86■□□□□ 0.61
CSNK1E-213ENST00000495232 KANK4Q5T7N3 995 aaPredicted RBP18.86■□□□□ 0.61
CSNK1E-213ENST00000495232 CDC42BPBQ9Y5S2 1711 aa18.86■□□□□ 0.61
CSNK1E-213ENST00000495232 COL17A1Q9UMD9 1497 aaPredicted RBP18.85■□□□□ 0.61
CSNK1E-213ENST00000495232 CFDP1Q9UEE9 299 aaPredicted RBP18.84■□□□□ 0.61
CSNK1E-213ENST00000495232 GPATCH8Q9UKJ3 1502 aaKnown RBP18.84■□□□□ 0.61
CSNK1E-213ENST00000495232 ADGRL1O94910 1474 aa18.84■□□□□ 0.61
CSNK1E-213ENST00000495232 NCOA2Q15596 1464 aa18.84■□□□□ 0.61
CSNK1E-213ENST00000495232 ZNF777Q9ULD5 760 aaPredicted RBP18.83■□□□□ 0.6
CSNK1E-213ENST00000495232 DENND4BO75064 1496 aaPredicted RBP18.82■□□□□ 0.6
CSNK1E-213ENST00000495232 ITSN2Q9NZM3 1697 aa18.82■□□□□ 0.6
CSNK1E-213ENST00000495232 RAPGEF3O95398 923 aa18.81■□□□□ 0.6
CSNK1E-213ENST00000495232 SCAPERQ9BY12 1400 aa18.8■□□□□ 0.6
CSNK1E-213ENST00000495232 RICTORQ6R327 1708 aa18.75■□□□□ 0.59
CSNK1E-213ENST00000495232 PLEKHH2Q8IVE3 1493 aa18.74■□□□□ 0.59
CSNK1E-213ENST00000495232 POGZQ7Z3K3 1410 aa18.74■□□□□ 0.59
CSNK1E-213ENST00000495232 SAMD9LQ8IVG5 1584 aa18.73■□□□□ 0.59
CSNK1E-213ENST00000495232 MYT1LQ9UL68 1186 aa18.73■□□□□ 0.59
CSNK1E-213ENST00000495232 ABCC1P33527 1531 aa18.73■□□□□ 0.59
CSNK1E-213ENST00000495232 FRMPD1Q5SYB0 1578 aa18.72■□□□□ 0.59
CSNK1E-213ENST00000495232 ZNF518AQ6AHZ1 1483 aa18.72■□□□□ 0.59
CSNK1E-213ENST00000495232 MYOM3Q5VTT5 1437 aa18.71■□□□□ 0.59
CSNK1E-213ENST00000495232 HNRNPMP52272 730 aaKnown RBP eCLIP18.7■□□□□ 0.58
CSNK1E-213ENST00000495232 AFAP1Q8N556 730 aa18.7■□□□□ 0.58
CSNK1E-213ENST00000495232 SYCP2Q9BX26 1530 aa18.69■□□□□ 0.58
CSNK1E-213ENST00000495232 KIAA1107Q9UPP5 1409 aa18.69■□□□□ 0.58
CSNK1E-213ENST00000495232 ZNF644Q9H582 1327 aaPredicted RBP18.69■□□□□ 0.58
CSNK1E-213ENST00000495232 ZMYM4Q5VZL5 1548 aa18.68■□□□□ 0.58
CSNK1E-213ENST00000495232 ARHGEF12Q9NZN5 1544 aa18.68■□□□□ 0.58
CSNK1E-213ENST00000495232 MIA2Q96PC5 1412 aa18.67■□□□□ 0.58
CSNK1E-213ENST00000495232 MAGI2Q86UL8 1455 aa18.67■□□□□ 0.58
CSNK1E-213ENST00000495232 PPARGC1BQ86YN6 1023 aaKnown RBP18.67■□□□□ 0.58
CSNK1E-213ENST00000495232 TRAPPC8Q9Y2L5 1435 aa18.66■□□□□ 0.58
CSNK1E-213ENST00000495232 CAMSAP2Q08AD1 1489 aa18.66■□□□□ 0.58
CSNK1E-213ENST00000495232 ZFYVE16Q7Z3T8 1539 aa18.64■□□□□ 0.58
CSNK1E-213ENST00000495232 KDM5CP41229 1560 aa18.64■□□□□ 0.58
CSNK1E-213ENST00000495232 RSPH4AQ5TD94 716 aa18.63■□□□□ 0.57
CSNK1E-213ENST00000495232 HECW2Q9P2P5 1572 aa18.63■□□□□ 0.57
CSNK1E-213ENST00000495232 SPAG9O60271 1321 aaKnown RBP18.62■□□□□ 0.57
CSNK1E-213ENST00000495232 ARHGEF40Q8TER5 1519 aa18.62■□□□□ 0.57
CSNK1E-213ENST00000495232 FGD6Q6ZV73 1430 aa18.61■□□□□ 0.57
CSNK1E-213ENST00000495232 PTPN23Q9H3S7 1636 aa18.6■□□□□ 0.57
CSNK1E-213ENST00000495232 MLH3Q9UHC1 1453 aa18.6■□□□□ 0.57
CSNK1E-213ENST00000495232 YEATS2Q9ULM3 1422 aa18.6■□□□□ 0.57
CSNK1E-213ENST00000495232 MBD5Q9P267 1494 aa18.59■□□□□ 0.57
CSNK1E-213ENST00000495232 ARID4BQ4LE39 1312 aaPredicted RBP18.59■□□□□ 0.57
CSNK1E-213ENST00000495232 TSPY4P0CV99 314 aa18.59■□□□□ 0.57
CSNK1E-213ENST00000495232 TSPY10P0CW01 314 aa18.59■□□□□ 0.57
CSNK1E-213ENST00000495232 CCDC141Q6ZP82 1450 aa18.58■□□□□ 0.57
CSNK1E-213ENST00000495232 ARHGEF5Q12774 1597 aa18.57■□□□□ 0.56
CSNK1E-213ENST00000495232 ATP10AO60312 1499 aa18.57■□□□□ 0.56
CSNK1E-213ENST00000495232 FAM50AQ14320 339 aaKnown RBP18.56■□□□□ 0.56
CSNK1E-213ENST00000495232 C9orf84Q5VXU9 1444 aa18.55■□□□□ 0.56
CSNK1E-213ENST00000495232 KIDINS220Q9ULH0 1771 aa18.55■□□□□ 0.56
CSNK1E-213ENST00000495232 ATP7AQ04656 1500 aa18.54■□□□□ 0.56
CSNK1E-213ENST00000495232 TCOF1Q13428 1488 aaKnown RBP18.53■□□□□ 0.56
CSNK1E-213ENST00000495232 ABCA6Q8N139 1617 aa18.52■□□□□ 0.56
CSNK1E-213ENST00000495232 INO80Q9ULG1 1556 aaPredicted RBP18.52■□□□□ 0.56
CSNK1E-213ENST00000495232 DIP2CQ9Y2E4 1556 aa18.52■□□□□ 0.56
CSNK1E-213ENST00000495232 RTEL1-TNFRSF6BF6WH68 1400 aa18.52■□□□□ 0.56
CSNK1E-213ENST00000495232 REREQ9P2R6 1566 aa18.47■□□□□ 0.55
CSNK1E-213ENST00000495232 DNMT1P26358 1616 aaKnown RBP18.47■□□□□ 0.55
CSNK1E-213ENST00000495232 DAPK1P53355 1430 aa18.47■□□□□ 0.55
CSNK1E-213ENST00000495232 ADGBQ8N7X0 1667 aa18.47■□□□□ 0.55
CSNK1E-213ENST00000495232 KDM4FA0A1W2PPD8 638 aa18.46■□□□□ 0.55
CSNK1E-213ENST00000495232 MLECQ14165 292 aa18.46■□□□□ 0.55
CSNK1E-213ENST00000495232 ABCC5O15440 1437 aa18.46■□□□□ 0.55
CSNK1E-213ENST00000495232 MAST1Q9Y2H9 1570 aa18.46■□□□□ 0.55
CSNK1E-213ENST00000495232 CROCC2H7BZ55 1655 aa18.45■□□□□ 0.54
CSNK1E-213ENST00000495232 AEBP2Q6ZN18 517 aaPredicted RBP18.45■□□□□ 0.54
CSNK1E-213ENST00000495232 A2MP01023 1474 aa18.45■□□□□ 0.54
CSNK1E-213ENST00000495232 BCORL1Q5H9F3 1711 aa18.44■□□□□ 0.54
CSNK1E-213ENST00000495232 SHANK2Q9UPX8 1470 aa18.44■□□□□ 0.54
CSNK1E-213ENST00000495232 SIGLEC1Q9BZZ2 1709 aa18.43■□□□□ 0.54
CSNK1E-213ENST00000495232 CHIC2Q9UKJ5 165 aa18.42■□□□□ 0.54
CSNK1E-213ENST00000495232 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.42■□□□□ 0.548e-8■■■■□ 24.8
CSNK1E-213ENST00000495232 AGLP35573 1532 aa18.41■□□□□ 0.54
CSNK1E-213ENST00000495232 DHX29Q7Z478 1369 aaKnown RBP18.41■□□□□ 0.54
CSNK1E-213ENST00000495232 ITGAEP38570 1179 aa18.4■□□□□ 0.54
CSNK1E-213ENST00000495232 ESF1Q9H501 851 aaKnown RBP18.4■□□□□ 0.54
CSNK1E-213ENST00000495232 ANKRD30AQ9BXX3 1397 aa18.4■□□□□ 0.54
CSNK1E-213ENST00000495232 RRBP1Q9P2E9 1410 aaKnown RBP18.4■□□□□ 0.54
CSNK1E-213ENST00000495232 PLXNC1O60486 1568 aa18.39■□□□□ 0.53
CSNK1E-213ENST00000495232 ADAMTSL3P82987 1691 aa18.38■□□□□ 0.53
CSNK1E-213ENST00000495232 RRP7BPQ9NSQ0 103 aa18.38■□□□□ 0.53
CSNK1E-213ENST00000495232 KIF15Q9NS87 1388 aa18.37■□□□□ 0.53
CSNK1E-213ENST00000495232 KIF3BO15066 747 aa18.36■□□□□ 0.53
CSNK1E-213ENST00000495232 GGT6Q6P531 493 aa18.36■□□□□ 0.53
CSNK1E-213ENST00000495232 MADDQ8WXG6 1647 aa18.36■□□□□ 0.53
CSNK1E-213ENST00000495232 DUOX2Q9NRD8 1548 aa18.35■□□□□ 0.53
CSNK1E-213ENST00000495232 FER1L4A9Z1Z3 1794 aa18.35■□□□□ 0.53
CSNK1E-213ENST00000495232 NCOA1Q15788 1441 aa18.33■□□□□ 0.53
CSNK1E-213ENST00000495232 RIMS1Q86UR5 1692 aaKnown RBP18.33■□□□□ 0.52
CSNK1E-213ENST00000495232 ADGRL2O95490 1459 aa18.33■□□□□ 0.52
CSNK1E-213ENST00000495232 PLPPR3Q6T4P5 718 aa18.3■□□□□ 0.52
CSNK1E-213ENST00000495232 PPP6R1Q9UPN7 881 aa18.3■□□□□ 0.52
CSNK1E-213ENST00000495232 PTPRMP28827 1452 aa18.3■□□□□ 0.52
CSNK1E-213ENST00000495232 PTPRKQ15262 1439 aa18.3■□□□□ 0.52
CSNK1E-213ENST00000495232 ERBINQ96RT1 1412 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 1170.1 ms