RNA–Protein interactions for RNA: ENST00000495221.1

PDE1C-211, Transcript of phosphodiesterase 1C, humanhuman

TSL 4

Gene PDE1C, Length 540 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-211ENST00000495221 POGZQ7Z3K3 1410 aa35.21■■■■□ 3.23
PDE1C-211ENST00000495221 ZFYVE16Q7Z3T8 1539 aa35.21■■■■□ 3.23
PDE1C-211ENST00000495221 SCAPERQ9BY12 1400 aa35.19■■■■□ 3.22
PDE1C-211ENST00000495221 HECW2Q9P2P5 1572 aa35.18■■■■□ 3.22
PDE1C-211ENST00000495221 EFCAB2Q5VUJ9 269 aa35.18■■■■□ 3.22
PDE1C-211ENST00000495221 CDC42BPBQ9Y5S2 1711 aa35.18■■■■□ 3.22
PDE1C-211ENST00000495221 ARHGAP5Q13017 1502 aa35.16■■■■□ 3.22
PDE1C-211ENST00000495221 PREX2Q70Z35 1606 aa35.15■■■■□ 3.22
PDE1C-211ENST00000495221 MADDQ8WXG6 1647 aa35.14■■■■□ 3.22
PDE1C-211ENST00000495221 PTPRMP28827 1452 aa35.1■■■■□ 3.21
PDE1C-211ENST00000495221 YEATS2Q9ULM3 1422 aa35.1■■■■□ 3.21
PDE1C-211ENST00000495221 ARID4BQ4LE39 1312 aaPredicted RBP35.09■■■■□ 3.21
PDE1C-211ENST00000495221 SIGLEC1Q9BZZ2 1709 aa35.08■■■■□ 3.21
PDE1C-211ENST00000495221 ZNF518AQ6AHZ1 1483 aa35.08■■■■□ 3.21
PDE1C-211ENST00000495221 CDC42BPAQ5VT25 1732 aa35.07■■■■□ 3.2
PDE1C-211ENST00000495221 KDM5CP41229 1560 aa35.06■■■■□ 3.2
PDE1C-211ENST00000495221 RIMS1Q86UR5 1692 aaKnown RBP35.03■■■■□ 3.2
PDE1C-211ENST00000495221 ABCC1P33527 1531 aa34.99■■■■□ 3.19
PDE1C-211ENST00000495221 ITSN2Q9NZM3 1697 aa34.98■■■■□ 3.19
PDE1C-211ENST00000495221 ATP10AO60312 1499 aa34.97■■■■□ 3.19
PDE1C-211ENST00000495221 C9orf84Q5VXU9 1444 aa34.96■■■■□ 3.19
PDE1C-211ENST00000495221 FER1L4A9Z1Z3 1794 aa34.95■■■■□ 3.18
PDE1C-211ENST00000495221 CEP162Q5TB80 1403 aa34.92■■■■□ 3.18
PDE1C-211ENST00000495221 REREQ9P2R6 1566 aa34.88■■■■□ 3.17
PDE1C-211ENST00000495221 DIP2CQ9Y2E4 1556 aa34.88■■■■□ 3.17
PDE1C-211ENST00000495221 MLH3Q9UHC1 1453 aa34.88■■■■□ 3.17
PDE1C-211ENST00000495221 AFAP1Q8N556 730 aa34.87■■■■□ 3.17
PDE1C-211ENST00000495221 ARHGEF12Q9NZN5 1544 aa34.86■■■■□ 3.17
PDE1C-211ENST00000495221 ILDR1Q86SU0 546 aaPredicted RBP34.86■■■■□ 3.17
PDE1C-211ENST00000495221 ABCA6Q8N139 1617 aa34.85■■■■□ 3.17
PDE1C-211ENST00000495221 GPATCH8Q9UKJ3 1502 aaKnown RBP34.85■■■■□ 3.17
PDE1C-211ENST00000495221 SAMD9LQ8IVG5 1584 aa34.84■■■■□ 3.17
PDE1C-211ENST00000495221 TRAPPC8Q9Y2L5 1435 aa34.82■■■■□ 3.17
PDE1C-211ENST00000495221 MTUS2Q5JR59 1369 aa34.81■■■■□ 3.16
PDE1C-211ENST00000495221 EHBP1L1Q8N3D4 1523 aa34.81■■■■□ 3.16
PDE1C-211ENST00000495221 KIDINS220Q9ULH0 1771 aa34.79■■■■□ 3.16
PDE1C-211ENST00000495221 SYCP2Q9BX26 1530 aa34.76■■■■□ 3.15
PDE1C-211ENST00000495221 LMTK3Q96Q04 1460 aa34.75■■■■□ 3.15
PDE1C-211ENST00000495221 MLECQ14165 292 aa34.74■■■■□ 3.15
PDE1C-211ENST00000495221 MYT1LQ9UL68 1186 aa34.74■■■■□ 3.15
PDE1C-211ENST00000495221 PLEKHH2Q8IVE3 1493 aa34.73■■■■□ 3.15
PDE1C-211ENST00000495221 CCNB3Q8WWL7 1395 aa34.73■■■■□ 3.15
PDE1C-211ENST00000495221 AGLP35573 1532 aa34.72■■■■□ 3.15
PDE1C-211ENST00000495221 TIAM1Q13009 1591 aa34.71■■■■□ 3.15
PDE1C-211ENST00000495221 KIAA1107Q9UPP5 1409 aa34.7■■■■□ 3.15
PDE1C-211ENST00000495221 ZNF777Q9ULD5 760 aaPredicted RBP34.67■■■■□ 3.14
PDE1C-211ENST00000495221 CFDP1Q9UEE9 299 aaPredicted RBP34.66■■■■□ 3.14
PDE1C-211ENST00000495221 SUPT6HQ7KZ85 1726 aaKnown RBP34.64■■■■□ 3.14
PDE1C-211ENST00000495221 INO80Q9ULG1 1556 aaPredicted RBP34.62■■■■□ 3.13
PDE1C-211ENST00000495221 PREX1Q8TCU6 1659 aa34.61■■■■□ 3.13
PDE1C-211ENST00000495221 ATP7AQ04656 1500 aa34.6■■■■□ 3.13
PDE1C-211ENST00000495221 VPS8Q8N3P4 1428 aa34.58■■■■□ 3.13
PDE1C-211ENST00000495221 SETD1BQ9UPS6 1966 aaKnown RBP34.57■■■■□ 3.12
PDE1C-211ENST00000495221 HNRNPMP52272 730 aaKnown RBP eCLIP34.57■■■■□ 3.12
PDE1C-211ENST00000495221 SPAG9O60271 1321 aaKnown RBP34.56■■■■□ 3.12
PDE1C-211ENST00000495221 PLPPR3Q6T4P5 718 aa34.56■■■■□ 3.12
PDE1C-211ENST00000495221 LOC105371045A0A1W2PR82 267 aa34.54■■■■□ 3.12
PDE1C-211ENST00000495221 C3P01024 1663 aa34.54■■■■□ 3.12
PDE1C-211ENST00000495221 PLXNC1O60486 1568 aa34.52■■■■□ 3.12
PDE1C-211ENST00000495221 NCOA2Q15596 1464 aa34.52■■■■□ 3.12
PDE1C-211ENST00000495221 ADGBQ8N7X0 1667 aa34.5■■■■□ 3.11
PDE1C-211ENST00000495221 MBD5Q9P267 1494 aa34.48■■■■□ 3.11
PDE1C-211ENST00000495221 MROH2AA6NES4 1674 aa34.47■■■■□ 3.11
PDE1C-211ENST00000495221 CNTLNQ9NXG0 1405 aa34.47■■■■□ 3.11
PDE1C-211ENST00000495221 MAP3K1Q13233 1512 aa34.45■■■■□ 3.1
PDE1C-211ENST00000495221 A2MP01023 1474 aa34.44■■■■□ 3.1
PDE1C-211ENST00000495221 CEBPAP49715 358 aaPredicted RBP34.43■■■■□ 3.1
PDE1C-211ENST00000495221 LRRC9Q6ZRR7 1453 aa34.42■■■■□ 3.1
PDE1C-211ENST00000495221 ZNF644Q9H582 1327 aaPredicted RBP34.42■■■■□ 3.1
PDE1C-211ENST00000495221 ESF1Q9H501 851 aaKnown RBP34.42■■■■□ 3.1
PDE1C-211ENST00000495221 HSPA2P54652 639 aa34.41■■■■□ 3.1
PDE1C-211ENST00000495221 CAMSAP2Q08AD1 1489 aa34.4■■■■□ 3.1
PDE1C-211ENST00000495221 RTEL1-TNFRSF6BF6WH68 1400 aa34.4■■■■□ 3.1
PDE1C-211ENST00000495221 UHRF1BP1Q6BDS2 1440 aa34.38■■■■□ 3.09
PDE1C-211ENST00000495221 CCDC141Q6ZP82 1450 aa34.36■■■■□ 3.09
PDE1C-211ENST00000495221 ARHGEF5Q12774 1597 aa34.33■■■■□ 3.09
PDE1C-211ENST00000495221 CLTCQ00610 1675 aaKnown RBP34.32■■■■□ 3.08
PDE1C-211ENST00000495221 RSPH4AQ5TD94 716 aa34.3■■■■□ 3.08
PDE1C-211ENST00000495221 FBXO41Q8TF61 875 aa34.28■■■■□ 3.08
PDE1C-211ENST00000495221 STRCQ7RTU9 1775 aa34.27■■■■□ 3.08
PDE1C-211ENST00000495221 NPATQ14207 1427 aa34.26■■■■□ 3.07
PDE1C-211ENST00000495221 PPP6R1Q9UPN7 881 aa34.22■■■■□ 3.07
PDE1C-211ENST00000495221 ZMYM3Q14202 1370 aa34.22■■■■□ 3.07
PDE1C-211ENST00000495221 DHX29Q7Z478 1369 aaKnown RBP34.22■■■■□ 3.07
PDE1C-211ENST00000495221 KANK4Q5T7N3 995 aaPredicted RBP34.18■■■■□ 3.06
PDE1C-211ENST00000495221 MYOM3Q5VTT5 1437 aa34.18■■■■□ 3.06
PDE1C-211ENST00000495221 MIA2Q96PC5 1412 aa34.18■■■■□ 3.06
PDE1C-211ENST00000495221 MAST1Q9Y2H9 1570 aa34.18■■■■□ 3.06
PDE1C-211ENST00000495221 FAM135AQ9P2D6 1515 aa34.17■■■■□ 3.06
PDE1C-211ENST00000495221 GGT6Q6P531 493 aa34.16■■■■□ 3.06
PDE1C-211ENST00000495221 ZNF142P52746 1687 aaPredicted RBP34.15■■■■□ 3.06
PDE1C-211ENST00000495221 MYO3AQ8NEV4 1616 aa34.12■■■■□ 3.05
PDE1C-211ENST00000495221 TSPY4P0CV99 314 aa34.11■■■■□ 3.05
PDE1C-211ENST00000495221 TSPY10P0CW01 314 aa34.11■■■■□ 3.05
PDE1C-211ENST00000495221 DMRT2Q9Y5R5 561 aa34.11■■■■□ 3.05
PDE1C-211ENST00000495221 PTPRKQ15262 1439 aa34.1■■■■□ 3.05
PDE1C-211ENST00000495221 KDM5DQ9BY66 1539 aa34.07■■■■□ 3.04
PDE1C-211ENST00000495221 APLP2Q06481 763 aa34.06■■■■□ 3.04
PDE1C-211ENST00000495221 NCOA1Q15788 1441 aa34.04■■■■□ 3.04
PDE1C-211ENST00000495221 KIF3BO15066 747 aa34.04■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms