RNA–Protein interactions for RNA: ENST00000495175.6

TRIT1-213, Transcript of tRNA isopentenyltransferase 1, humanhuman

TSL 1 (best)

Gene TRIT1, Length 1,156 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIT1-213ENST00000495175 COL17A1Q9UMD9 1497 aaPredicted RBP17.5■□□□□ 0.39
TRIT1-213ENST00000495175 FANCAO15360 1455 aa17.49■□□□□ 0.39
TRIT1-213ENST00000495175 CFAP74Q9C0B2 1584 aa17.49■□□□□ 0.39
TRIT1-213ENST00000495175 ITSN2Q9NZM3 1697 aa17.48■□□□□ 0.39
TRIT1-213ENST00000495175 SAMD9LQ8IVG5 1584 aa17.46■□□□□ 0.39
TRIT1-213ENST00000495175 PHLDB1Q86UU1 1377 aa17.46■□□□□ 0.39
TRIT1-213ENST00000495175 APLP2Q06481 763 aa17.46■□□□□ 0.39
TRIT1-213ENST00000495175 ARHGAP5Q13017 1502 aa17.46■□□□□ 0.39
TRIT1-213ENST00000495175 CCNB3Q8WWL7 1395 aa17.45■□□□□ 0.38
TRIT1-213ENST00000495175 AKNAQ7Z591 1439 aa17.45■□□□□ 0.38
TRIT1-213ENST00000495175 FRMPD1Q5SYB0 1578 aa17.45■□□□□ 0.38
TRIT1-213ENST00000495175 ABCC1P33527 1531 aa17.43■□□□□ 0.38
TRIT1-213ENST00000495175 ARHGEF12Q9NZN5 1544 aa17.43■□□□□ 0.38
TRIT1-213ENST00000495175 MYOM3Q5VTT5 1437 aa17.43■□□□□ 0.38
TRIT1-213ENST00000495175 KDM6BO15054 1643 aa17.43■□□□□ 0.38
TRIT1-213ENST00000495175 RICTORQ6R327 1708 aa17.41■□□□□ 0.38
TRIT1-213ENST00000495175 ADGRL1O94910 1474 aa17.4■□□□□ 0.38
TRIT1-213ENST00000495175 EFCAB2Q5VUJ9 269 aa17.4■□□□□ 0.38
TRIT1-213ENST00000495175 MIA2Q96PC5 1412 aa17.38■□□□□ 0.37
TRIT1-213ENST00000495175 FGD6Q6ZV73 1430 aa17.37■□□□□ 0.37
TRIT1-213ENST00000495175 POGZQ7Z3K3 1410 aa17.37■□□□□ 0.37
TRIT1-213ENST00000495175 KIAA1107Q9UPP5 1409 aa17.37■□□□□ 0.37
TRIT1-213ENST00000495175 CAMSAP2Q08AD1 1489 aa17.37■□□□□ 0.37
TRIT1-213ENST00000495175 MBD5Q9P267 1494 aa17.37■□□□□ 0.37
TRIT1-213ENST00000495175 SYCP2Q9BX26 1530 aa17.37■□□□□ 0.37
TRIT1-213ENST00000495175 CFDP1Q9UEE9 299 aaPredicted RBP17.36■□□□□ 0.37
TRIT1-213ENST00000495175 ZNF644Q9H582 1327 aaPredicted RBP17.36■□□□□ 0.37
TRIT1-213ENST00000495175 SCAPERQ9BY12 1400 aa17.36■□□□□ 0.37
TRIT1-213ENST00000495175 TCOF1Q13428 1488 aaKnown RBP17.36■□□□□ 0.37
TRIT1-213ENST00000495175 ZMYM4Q5VZL5 1548 aa17.36■□□□□ 0.37
TRIT1-213ENST00000495175 KDM5CP41229 1560 aa17.36■□□□□ 0.37
TRIT1-213ENST00000495175 PPARGC1BQ86YN6 1023 aaKnown RBP17.35■□□□□ 0.37
TRIT1-213ENST00000495175 DENND4BO75064 1496 aaPredicted RBP17.35■□□□□ 0.37
TRIT1-213ENST00000495175 PTPN23Q9H3S7 1636 aa17.34■□□□□ 0.37
TRIT1-213ENST00000495175 TRAPPC8Q9Y2L5 1435 aa17.34■□□□□ 0.37
TRIT1-213ENST00000495175 PLEKHH2Q8IVE3 1493 aa17.33■□□□□ 0.37
TRIT1-213ENST00000495175 ARHGEF5Q12774 1597 aa17.32■□□□□ 0.36
TRIT1-213ENST00000495175 ZNF518AQ6AHZ1 1483 aa17.31■□□□□ 0.36
TRIT1-213ENST00000495175 RAPGEF3O95398 923 aa17.3■□□□□ 0.36
TRIT1-213ENST00000495175 ZNF777Q9ULD5 760 aaPredicted RBP17.28■□□□□ 0.36
TRIT1-213ENST00000495175 RRBP1Q9P2E9 1410 aaKnown RBP17.28■□□□□ 0.36
TRIT1-213ENST00000495175 INO80Q9ULG1 1556 aaPredicted RBP17.28■□□□□ 0.36
TRIT1-213ENST00000495175 KIDINS220Q9ULH0 1771 aa17.26■□□□□ 0.35
TRIT1-213ENST00000495175 HNRNPMP52272 730 aaKnown RBP eCLIP17.26■□□□□ 0.35
TRIT1-213ENST00000495175 AFAP1Q8N556 730 aa17.26■□□□□ 0.35
TRIT1-213ENST00000495175 HECW2Q9P2P5 1572 aa17.26■□□□□ 0.35
TRIT1-213ENST00000495175 CROCC2H7BZ55 1655 aa17.26■□□□□ 0.35
TRIT1-213ENST00000495175 DNMT1P26358 1616 aaKnown RBP17.25■□□□□ 0.35
TRIT1-213ENST00000495175 CCDC141Q6ZP82 1450 aa17.25■□□□□ 0.35
TRIT1-213ENST00000495175 MLH3Q9UHC1 1453 aa17.25■□□□□ 0.35
TRIT1-213ENST00000495175 ZFYVE16Q7Z3T8 1539 aa17.25■□□□□ 0.35
TRIT1-213ENST00000495175 ARHGEF40Q8TER5 1519 aa17.25■□□□□ 0.35
TRIT1-213ENST00000495175 MAGI2Q86UL8 1455 aa17.24■□□□□ 0.35
TRIT1-213ENST00000495175 MAST1Q9Y2H9 1570 aa17.23■□□□□ 0.35
TRIT1-213ENST00000495175 YEATS2Q9ULM3 1422 aa17.23■□□□□ 0.35
TRIT1-213ENST00000495175 ABCA6Q8N139 1617 aa17.23■□□□□ 0.35
TRIT1-213ENST00000495175 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.23■□□□□ 0.353e-6■□□□□ 10.4
TRIT1-213ENST00000495175 ABCC5O15440 1437 aa17.22■□□□□ 0.35
TRIT1-213ENST00000495175 SIGLEC1Q9BZZ2 1709 aa17.22■□□□□ 0.35
TRIT1-213ENST00000495175 DIP2CQ9Y2E4 1556 aa17.22■□□□□ 0.35
TRIT1-213ENST00000495175 ATP7AQ04656 1500 aa17.21■□□□□ 0.34
TRIT1-213ENST00000495175 DAPK1P53355 1430 aa17.21■□□□□ 0.34
TRIT1-213ENST00000495175 SHANK2Q9UPX8 1470 aa17.2■□□□□ 0.34
TRIT1-213ENST00000495175 RTEL1-TNFRSF6BF6WH68 1400 aa17.19■□□□□ 0.34
TRIT1-213ENST00000495175 PTPRKQ15262 1439 aa17.18■□□□□ 0.34
TRIT1-213ENST00000495175 REREQ9P2R6 1566 aa17.18■□□□□ 0.34
TRIT1-213ENST00000495175 RSPH4AQ5TD94 716 aa17.17■□□□□ 0.34
TRIT1-213ENST00000495175 ADGBQ8N7X0 1667 aa17.16■□□□□ 0.34
TRIT1-213ENST00000495175 PLXNC1O60486 1568 aa17.15■□□□□ 0.34
TRIT1-213ENST00000495175 C9orf84Q5VXU9 1444 aa17.15■□□□□ 0.34
TRIT1-213ENST00000495175 SPAG9O60271 1321 aaKnown RBP17.15■□□□□ 0.34
TRIT1-213ENST00000495175 ADGRL2O95490 1459 aa17.14■□□□□ 0.33
TRIT1-213ENST00000495175 ATP10AO60312 1499 aa17.13■□□□□ 0.33
TRIT1-213ENST00000495175 FAM50AQ14320 339 aaKnown RBP17.12■□□□□ 0.33
TRIT1-213ENST00000495175 AGLP35573 1532 aa17.09■□□□□ 0.33
TRIT1-213ENST00000495175 BCORL1Q5H9F3 1711 aa17.08■□□□□ 0.32
TRIT1-213ENST00000495175 NCOA1Q15788 1441 aa17.08■□□□□ 0.32
TRIT1-213ENST00000495175 A2MP01023 1474 aa17.07■□□□□ 0.32
TRIT1-213ENST00000495175 TSPY4P0CV99 314 aa17.06■□□□□ 0.32
TRIT1-213ENST00000495175 TSPY10P0CW01 314 aa17.06■□□□□ 0.32
TRIT1-213ENST00000495175 ROCK1Q13464 1354 aa17.05■□□□□ 0.32
TRIT1-213ENST00000495175 DHX29Q7Z478 1369 aaKnown RBP17.04■□□□□ 0.32
TRIT1-213ENST00000495175 DUOX2Q9NRD8 1548 aa17.04■□□□□ 0.32
TRIT1-213ENST00000495175 EIF2AK4Q9P2K8 1649 aaKnown RBP17.03■□□□□ 0.32
TRIT1-213ENST00000495175 KIF15Q9NS87 1388 aa17.02■□□□□ 0.32
TRIT1-213ENST00000495175 ANKRD30AQ9BXX3 1397 aa17.02■□□□□ 0.31
TRIT1-213ENST00000495175 ADAMTSL3P82987 1691 aa17.01■□□□□ 0.31
TRIT1-213ENST00000495175 CHIC2Q9UKJ5 165 aa17.01■□□□□ 0.31
TRIT1-213ENST00000495175 MROH1Q8NDA8 1641 aa17■□□□□ 0.31
TRIT1-213ENST00000495175 RNF17Q9BXT8 1623 aaKnown RBP17■□□□□ 0.31
TRIT1-213ENST00000495175 ERBINQ96RT1 1412 aa16.99■□□□□ 0.31
TRIT1-213ENST00000495175 GCC2Q8IWJ2 1684 aa16.99■□□□□ 0.31
TRIT1-213ENST00000495175 MYT1LQ9UL68 1186 aa16.98■□□□□ 0.31
TRIT1-213ENST00000495175 DEPDC5O75140 1603 aa16.98■□□□□ 0.31
TRIT1-213ENST00000495175 RRP7BPQ9NSQ0 103 aa16.97■□□□□ 0.31
TRIT1-213ENST00000495175 NAIPQ13075 1403 aa16.96■□□□□ 0.31
TRIT1-213ENST00000495175 ITGAEP38570 1179 aa16.96■□□□□ 0.31
TRIT1-213ENST00000495175 HFM1A2PYH4 1435 aa16.96■□□□□ 0.3
TRIT1-213ENST00000495175 MADDQ8WXG6 1647 aa16.95■□□□□ 0.3
TRIT1-213ENST00000495175 PRDM15P57071 1507 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms