RNA–Protein interactions for RNA: ENST00000494854.5

SHISA5-216, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,908 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-216ENST00000494854 KDM4FA0A1W2PPD8 638 aa23.43■■□□□ 1.34
SHISA5-216ENST00000494854 PLCH2O75038 1416 aa23.43■■□□□ 1.34
SHISA5-216ENST00000494854 AKNAQ7Z591 1439 aa23.41■■□□□ 1.34
SHISA5-216ENST00000494854 KIF14Q15058 1648 aa23.4■■□□□ 1.34
SHISA5-216ENST00000494854 RAPGEF3O95398 923 aa23.39■■□□□ 1.33
SHISA5-216ENST00000494854 MYO5CQ9NQX4 1742 aa23.37■■□□□ 1.33
SHISA5-216ENST00000494854 DENND4BO75064 1496 aaPredicted RBP23.36■■□□□ 1.33
SHISA5-216ENST00000494854 CCNB3Q8WWL7 1395 aa23.35■■□□□ 1.33
SHISA5-216ENST00000494854 FRMPD1Q5SYB0 1578 aa23.35■■□□□ 1.33
SHISA5-216ENST00000494854 EFCAB2Q5VUJ9 269 aa23.34■■□□□ 1.33
SHISA5-216ENST00000494854 ADGRL1O94910 1474 aa23.33■■□□□ 1.33
SHISA5-216ENST00000494854 RICTORQ6R327 1708 aa23.33■■□□□ 1.32
SHISA5-216ENST00000494854 SCAPERQ9BY12 1400 aa23.27■■□□□ 1.32
SHISA5-216ENST00000494854 ZMYM4Q5VZL5 1548 aa23.26■■□□□ 1.31
SHISA5-216ENST00000494854 CDC42BPBQ9Y5S2 1711 aa23.25■■□□□ 1.31
SHISA5-216ENST00000494854 ARHGAP5Q13017 1502 aa23.25■■□□□ 1.31
SHISA5-216ENST00000494854 MAGI2Q86UL8 1455 aa23.24■■□□□ 1.31
SHISA5-216ENST00000494854 POGZQ7Z3K3 1410 aa23.24■■□□□ 1.31
SHISA5-216ENST00000494854 PREX2Q70Z35 1606 aa23.23■■□□□ 1.31
SHISA5-216ENST00000494854 ARHGEF40Q8TER5 1519 aa23.21■■□□□ 1.31
SHISA5-216ENST00000494854 CDC42BPAQ5VT25 1732 aa23.2■■□□□ 1.3
SHISA5-216ENST00000494854 MTUS2Q5JR59 1369 aa23.19■■□□□ 1.3
SHISA5-216ENST00000494854 ZNF518AQ6AHZ1 1483 aa23.16■■□□□ 1.3
SHISA5-216ENST00000494854 ZFYVE16Q7Z3T8 1539 aa23.16■■□□□ 1.3
SHISA5-216ENST00000494854 GPATCH8Q9UKJ3 1502 aaKnown RBP23.16■■□□□ 1.3
SHISA5-216ENST00000494854 EHBP1L1Q8N3D4 1523 aa23.14■■□□□ 1.29
SHISA5-216ENST00000494854 YEATS2Q9ULM3 1422 aa23.14■■□□□ 1.29
SHISA5-216ENST00000494854 KDM5CP41229 1560 aa23.13■■□□□ 1.29
SHISA5-216ENST00000494854 ABCC1P33527 1531 aa23.12■■□□□ 1.29
SHISA5-216ENST00000494854 ITGAEP38570 1179 aa23.12■■□□□ 1.29
SHISA5-216ENST00000494854 AFAP1Q8N556 730 aa23.12■■□□□ 1.29
SHISA5-216ENST00000494854 ADAMTSL3P82987 1691 aa23.11■■□□□ 1.29
SHISA5-216ENST00000494854 SUPT6HQ7KZ85 1726 aaKnown RBP23.1■■□□□ 1.29
SHISA5-216ENST00000494854 ARID4BQ4LE39 1312 aaPredicted RBP23.1■■□□□ 1.29
SHISA5-216ENST00000494854 BCORL1Q5H9F3 1711 aa23.1■■□□□ 1.29
SHISA5-216ENST00000494854 DHX57Q6P158 1386 aaKnown RBP23.09■■□□□ 1.29
SHISA5-216ENST00000494854 ARHGEF12Q9NZN5 1544 aa23.09■■□□□ 1.29
SHISA5-216ENST00000494854 ITSN2Q9NZM3 1697 aa23.09■■□□□ 1.29
SHISA5-216ENST00000494854 ATP10AO60312 1499 aa23.08■■□□□ 1.29
SHISA5-216ENST00000494854 FAM50AQ14320 339 aaKnown RBP23.07■■□□□ 1.28
SHISA5-216ENST00000494854 CFDP1Q9UEE9 299 aaPredicted RBP23.07■■□□□ 1.28
SHISA5-216ENST00000494854 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.07■■□□□ 1.28
SHISA5-216ENST00000494854 MLH3Q9UHC1 1453 aa23.07■■□□□ 1.28
SHISA5-216ENST00000494854 CLSPNQ9HAW4 1339 aa23.07■■□□□ 1.28
SHISA5-216ENST00000494854 TRAPPC8Q9Y2L5 1435 aa23.06■■□□□ 1.28
SHISA5-216ENST00000494854 SAMD9LQ8IVG5 1584 aa23.06■■□□□ 1.28
SHISA5-216ENST00000494854 HECW2Q9P2P5 1572 aa23.05■■□□□ 1.28
SHISA5-216ENST00000494854 KIAA1107Q9UPP5 1409 aa23.05■■□□□ 1.28
SHISA5-216ENST00000494854 NCOA2Q15596 1464 aa23.04■■□□□ 1.28
SHISA5-216ENST00000494854 PLEKHH2Q8IVE3 1493 aa23.04■■□□□ 1.28
SHISA5-216ENST00000494854 ZNF777Q9ULD5 760 aaPredicted RBP23.04■■□□□ 1.28
SHISA5-216ENST00000494854 FGD6Q6ZV73 1430 aa23.04■■□□□ 1.28
SHISA5-216ENST00000494854 C9orf84Q5VXU9 1444 aa23.04■■□□□ 1.28
SHISA5-216ENST00000494854 SIGLEC1Q9BZZ2 1709 aa23.03■■□□□ 1.28
SHISA5-216ENST00000494854 PTPRMP28827 1452 aa23■■□□□ 1.27
SHISA5-216ENST00000494854 RAB3GAP2Q9H2M9 1393 aa22.99■■□□□ 1.27
SHISA5-216ENST00000494854 SYCP2Q9BX26 1530 aa22.99■■□□□ 1.27
SHISA5-216ENST00000494854 MADDQ8WXG6 1647 aa22.99■■□□□ 1.27
SHISA5-216ENST00000494854 SETD5Q9C0A6 1442 aa22.99■■□□□ 1.27
SHISA5-216ENST00000494854 REREQ9P2R6 1566 aa22.99■■□□□ 1.27
SHISA5-216ENST00000494854 DIP2CQ9Y2E4 1556 aa22.99■■□□□ 1.27
SHISA5-216ENST00000494854 MYOM3Q5VTT5 1437 aa22.98■■□□□ 1.27
SHISA5-216ENST00000494854 HNRNPMP52272 730 aaKnown RBP eCLIP22.98■■□□□ 1.27
SHISA5-216ENST00000494854 MYT1LQ9UL68 1186 aa22.98■■□□□ 1.27
SHISA5-216ENST00000494854 KIDINS220Q9ULH0 1771 aa22.97■■□□□ 1.27
SHISA5-216ENST00000494854 ABCA6Q8N139 1617 aa22.95■■□□□ 1.27
SHISA5-216ENST00000494854 SPAG9O60271 1321 aaKnown RBP22.93■■□□□ 1.26
SHISA5-216ENST00000494854 ZNF644Q9H582 1327 aaPredicted RBP22.92■■□□□ 1.26
SHISA5-216ENST00000494854 PTPN23Q9H3S7 1636 aa22.91■■□□□ 1.26
SHISA5-216ENST00000494854 MBD5Q9P267 1494 aa22.91■■□□□ 1.26
SHISA5-216ENST00000494854 RIMS1Q86UR5 1692 aaKnown RBP22.91■■□□□ 1.26
SHISA5-216ENST00000494854 AGLP35573 1532 aa22.91■■□□□ 1.26
SHISA5-216ENST00000494854 MLECQ14165 292 aa22.9■■□□□ 1.26
SHISA5-216ENST00000494854 ATP7AQ04656 1500 aa22.88■■□□□ 1.25
SHISA5-216ENST00000494854 FER1L4A9Z1Z3 1794 aa22.87■■□□□ 1.25
SHISA5-216ENST00000494854 INO80Q9ULG1 1556 aaPredicted RBP22.87■■□□□ 1.25
SHISA5-216ENST00000494854 RSPH4AQ5TD94 716 aa22.87■■□□□ 1.25
SHISA5-216ENST00000494854 CAMSAP2Q08AD1 1489 aa22.84■■□□□ 1.25
SHISA5-216ENST00000494854 ZNF316A6NFI3 1004 aaPredicted RBP22.84■■□□□ 1.25
SHISA5-216ENST00000494854 RTEL1-TNFRSF6BF6WH68 1400 aa22.83■■□□□ 1.25
SHISA5-216ENST00000494854 TCOF1Q13428 1488 aaKnown RBP22.83■■□□□ 1.25
SHISA5-216ENST00000494854 PTPRKQ15262 1439 aa22.82■■□□□ 1.24
SHISA5-216ENST00000494854 MIA2Q96PC5 1412 aa22.81■■□□□ 1.24
SHISA5-216ENST00000494854 CCDC141Q6ZP82 1450 aa22.8■■□□□ 1.24
SHISA5-216ENST00000494854 ARHGEF5Q12774 1597 aa22.79■■□□□ 1.24
SHISA5-216ENST00000494854 A2MP01023 1474 aa22.79■■□□□ 1.24
SHISA5-216ENST00000494854 PLXNC1O60486 1568 aa22.78■■□□□ 1.24
SHISA5-216ENST00000494854 ADGBQ8N7X0 1667 aa22.78■■□□□ 1.24
SHISA5-216ENST00000494854 HFM1A2PYH4 1435 aa22.77■■□□□ 1.24
SHISA5-216ENST00000494854 DIEXFQ68CQ4 756 aaKnown RBP22.77■■□□□ 1.24
SHISA5-216ENST00000494854 TSPY4P0CV99 314 aa22.72■■□□□ 1.23
SHISA5-216ENST00000494854 TSPY10P0CW01 314 aa22.72■■□□□ 1.23
SHISA5-216ENST00000494854 CNTLNQ9NXG0 1405 aa22.72■■□□□ 1.23
SHISA5-216ENST00000494854 ESF1Q9H501 851 aaKnown RBP22.72■■□□□ 1.23
SHISA5-216ENST00000494854 LMTK3Q96Q04 1460 aa22.72■■□□□ 1.23
SHISA5-216ENST00000494854 DHX29Q7Z478 1369 aaKnown RBP22.71■■□□□ 1.23
SHISA5-216ENST00000494854 NAIPQ13075 1403 aa22.71■■□□□ 1.23
SHISA5-216ENST00000494854 SETD1BQ9UPS6 1966 aaKnown RBP22.71■■□□□ 1.23
SHISA5-216ENST00000494854 PLPPR3Q6T4P5 718 aa22.7■■□□□ 1.22
SHISA5-216ENST00000494854 GCC2Q8IWJ2 1684 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms