RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 TROQ12816 1431 aaPredicted RBP15.06■□□□□ 0
SAMM50-206ENST00000494795 UACAQ9BZF9 1416 aa15.06■□□□□ 0
SAMM50-206ENST00000494795 RTN4Q9NQC3 1192 aaKnown RBP15.05■□□□□ -0
SAMM50-206ENST00000494795 CDK11AQ9UQ88 783 aaPredicted RBP15.05■□□□□ -0
SAMM50-206ENST00000494795 DAPK1P53355 1430 aa15.04■□□□□ -0
SAMM50-206ENST00000494795 MIA2Q96PC5 1412 aa15.04■□□□□ -0
SAMM50-206ENST00000494795 GPATCH8Q9UKJ3 1502 aaKnown RBP15.04■□□□□ -0
SAMM50-206ENST00000494795 PTPRGP23470 1445 aa15.03■□□□□ -0
SAMM50-206ENST00000494795 ABCA8O94911 1581 aa15.03■□□□□ -0
SAMM50-206ENST00000494795 PPP1R15AO75807 674 aaPredicted RBP15.02■□□□□ -0
SAMM50-206ENST00000494795 PLEKHD1A6NEE1 506 aa15.01□□□□□ -0.01
SAMM50-206ENST00000494795 CAMSAP2Q08AD1 1489 aa15□□□□□ -0.01
SAMM50-206ENST00000494795 MPHOSPH9Q99550 1183 aa15□□□□□ -0.01
SAMM50-206ENST00000494795 KCNH8Q96L42 1107 aa14.99□□□□□ -0.01
SAMM50-206ENST00000494795 ACIN1Q9UKV3 1341 aaKnown RBP14.99□□□□□ -0.01
SAMM50-206ENST00000494795 HNRNPMP52272 730 aaKnown RBP eCLIP14.97□□□□□ -0.012e-7■■■■□ 25.4
SAMM50-206ENST00000494795 GCC2Q8IWJ2 1684 aa14.97□□□□□ -0.01
SAMM50-206ENST00000494795 DNMT1P26358 1616 aaKnown RBP14.96□□□□□ -0.01
SAMM50-206ENST00000494795 TONSLQ96HA7 1378 aa14.96□□□□□ -0.01
SAMM50-206ENST00000494795 DDX10Q13206 875 aaKnown RBP14.96□□□□□ -0.02
SAMM50-206ENST00000494795 KDM5BQ9UGL1 1544 aa14.94□□□□□ -0.02
SAMM50-206ENST00000494795 ABCC10Q5T3U5 1492 aa14.94□□□□□ -0.02
SAMM50-206ENST00000494795 AKNAQ7Z591 1439 aa14.93□□□□□ -0.02
SAMM50-206ENST00000494795 CDC42BPAQ5VT25 1732 aa14.92□□□□□ -0.02
SAMM50-206ENST00000494795 NCOA1Q15788 1441 aa14.91□□□□□ -0.02
SAMM50-206ENST00000494795 ADCY10Q96PN6 1610 aa14.91□□□□□ -0.02
SAMM50-206ENST00000494795 SLC4A1APQ9BWU0 796 aaKnown RBP14.9□□□□□ -0.02
SAMM50-206ENST00000494795 L3MBTL2Q969R5 705 aa14.89□□□□□ -0.03
SAMM50-206ENST00000494795 SHROOM2Q13796 1616 aa14.89□□□□□ -0.03
SAMM50-206ENST00000494795 ROCK1Q13464 1354 aa14.89□□□□□ -0.03
SAMM50-206ENST00000494795 GTF3C3Q9Y5Q9 886 aa14.87□□□□□ -0.03
SAMM50-206ENST00000494795 ITSN2Q9NZM3 1697 aa14.86□□□□□ -0.03
SAMM50-206ENST00000494795 TIMELESSQ9UNS1 1208 aa14.85□□□□□ -0.03
SAMM50-206ENST00000494795 PELP1Q8IZL8 1130 aaKnown RBP14.85□□□□□ -0.03
SAMM50-206ENST00000494795 PZPP20742 1482 aa14.85□□□□□ -0.03
SAMM50-206ENST00000494795 ANKRD30BQ9BXX2 1392 aa14.85□□□□□ -0.03
SAMM50-206ENST00000494795 NBPF8Q3BBV2 869 aa14.85□□□□□ -0.03
SAMM50-206ENST00000494795 TTC37Q6PGP7 1564 aa14.84□□□□□ -0.03
SAMM50-206ENST00000494795 CLASP1Q7Z460 1538 aa14.83□□□□□ -0.04
SAMM50-206ENST00000494795 CENPBP07199 599 aaPredicted RBP14.83□□□□□ -0.04
SAMM50-206ENST00000494795 CDC42BPBQ9Y5S2 1711 aa14.83□□□□□ -0.04
SAMM50-206ENST00000494795 C9orf84Q5VXU9 1444 aa14.82□□□□□ -0.04
SAMM50-206ENST00000494795 SAMD9LQ8IVG5 1584 aa14.82□□□□□ -0.04
SAMM50-206ENST00000494795 MBD5Q9P267 1494 aa14.82□□□□□ -0.04
SAMM50-206ENST00000494795 PKD2Q13563 968 aa14.82□□□□□ -0.04
SAMM50-206ENST00000494795 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.81□□□□□ -0.04
SAMM50-206ENST00000494795 CROCC2H7BZ55 1655 aa14.81□□□□□ -0.04
SAMM50-206ENST00000494795 ANKRD50Q9ULJ7 1429 aa14.81□□□□□ -0.04
SAMM50-206ENST00000494795 SENP3Q9H4L4 574 aaPredicted RBP14.81□□□□□ -0.04
SAMM50-206ENST00000494795 ABCC2Q92887 1545 aa14.8□□□□□ -0.04
SAMM50-206ENST00000494795 ANKRD30AQ9BXX3 1397 aa14.8□□□□□ -0.04
SAMM50-206ENST00000494795 TSPY4P0CV99 314 aa14.79□□□□□ -0.04
SAMM50-206ENST00000494795 TSPY10P0CW01 314 aa14.79□□□□□ -0.04
SAMM50-206ENST00000494795 HSPA5P11021 654 aaKnown RBP14.79□□□□□ -0.04
SAMM50-206ENST00000494795 C11orf95C9JLR9 678 aaPredicted RBP14.79□□□□□ -0.04
SAMM50-206ENST00000494795 ADGRL2O95490 1459 aa14.78□□□□□ -0.04
SAMM50-206ENST00000494795 SYCP2Q9BX26 1530 aa14.78□□□□□ -0.04
SAMM50-206ENST00000494795 PPP6R1Q9UPN7 881 aa14.77□□□□□ -0.04
SAMM50-206ENST00000494795 NUP155O75694 1391 aa14.77□□□□□ -0.04
SAMM50-206ENST00000494795 ZNF326Q5BKZ1 582 aaKnown RBP14.77□□□□□ -0.04
SAMM50-206ENST00000494795 KIF15Q9NS87 1388 aa14.77□□□□□ -0.04
SAMM50-206ENST00000494795 ADGBQ8N7X0 1667 aa14.77□□□□□ -0.05
SAMM50-206ENST00000494795 ARHGEF12Q9NZN5 1544 aa14.77□□□□□ -0.05
SAMM50-206ENST00000494795 ARHGAP5Q13017 1502 aa14.76□□□□□ -0.05
SAMM50-206ENST00000494795 RPRD2Q5VT52 1461 aaKnown RBP14.75□□□□□ -0.05
SAMM50-206ENST00000494795 ZCCHC11Q5TAX3 1644 aaKnown RBP14.75□□□□□ -0.05
SAMM50-206ENST00000494795 PREX2Q70Z35 1606 aa14.75□□□□□ -0.05
SAMM50-206ENST00000494795 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.75□□□□□ -0.05
SAMM50-206ENST00000494795 TEX14Q8IWB6 1497 aa14.74□□□□□ -0.05
SAMM50-206ENST00000494795 WASHC2AQ641Q2 1341 aa14.73□□□□□ -0.05
SAMM50-206ENST00000494795 AFAP1Q8N556 730 aa14.71□□□□□ -0.06
SAMM50-206ENST00000494795 CCDC141Q6ZP82 1450 aa14.71□□□□□ -0.06
SAMM50-206ENST00000494795 KIAA1107Q9UPP5 1409 aa14.7□□□□□ -0.06
SAMM50-206ENST00000494795 KDM2AQ9Y2K7 1162 aa14.69□□□□□ -0.06
SAMM50-206ENST00000494795 SHANK2Q9UPX8 1470 aa14.69□□□□□ -0.06
SAMM50-206ENST00000494795 TRAPPC8Q9Y2L5 1435 aa14.68□□□□□ -0.06
SAMM50-206ENST00000494795 ARHGEF5Q12774 1597 aa14.67□□□□□ -0.06
SAMM50-206ENST00000494795 PLEKHH2Q8IVE3 1493 aa14.67□□□□□ -0.06
SAMM50-206ENST00000494795 EIF4G2P78344 907 aaKnown RBP eCLIP14.67□□□□□ -0.06
SAMM50-206ENST00000494795 CNGB1Q14028 1251 aaPredicted RBP14.66□□□□□ -0.06
SAMM50-206ENST00000494795 MYO5CQ9NQX4 1742 aa14.65□□□□□ -0.06
SAMM50-206ENST00000494795 PLCH2O75038 1416 aa14.65□□□□□ -0.06
SAMM50-206ENST00000494795 RGL3Q3MIN7 710 aa14.64□□□□□ -0.07
SAMM50-206ENST00000494795 UHRF1BP1LA0JNW5 1464 aa14.63□□□□□ -0.07
SAMM50-206ENST00000494795 CCDC184Q52MB2 194 aa14.62□□□□□ -0.07
SAMM50-206ENST00000494795 OSCARQ8IYS5 282 aa14.62□□□□□ -0.07
SAMM50-206ENST00000494795 EFCAB2Q5VUJ9 269 aa14.62□□□□□ -0.07
SAMM50-206ENST00000494795 FAM135AQ9P2D6 1515 aa14.61□□□□□ -0.07
SAMM50-206ENST00000494795 DCAF11Q8TEB1 546 aa14.61□□□□□ -0.07
SAMM50-206ENST00000494795 ANP32CO43423 234 aa14.61□□□□□ -0.07
SAMM50-206ENST00000494795 POLR3GLQ9BT43 218 aa14.6□□□□□ -0.07
SAMM50-206ENST00000494795 PLA2R1Q13018 1463 aa14.59□□□□□ -0.07
SAMM50-206ENST00000494795 SPATA31E1Q6ZUB1 1445 aa14.59□□□□□ -0.07
SAMM50-206ENST00000494795 MYT1Q01538 1121 aa14.58□□□□□ -0.08
SAMM50-206ENST00000494795 KIF7Q2M1P5 1343 aa14.58□□□□□ -0.08
SAMM50-206ENST00000494795 RSPH4AQ5TD94 716 aa14.58□□□□□ -0.08
SAMM50-206ENST00000494795 WDR7Q9Y4E6 1490 aa14.58□□□□□ -0.08
SAMM50-206ENST00000494795 ASXL2Q76L83 1435 aa14.57□□□□□ -0.08
SAMM50-206ENST00000494795 ABCC1P33527 1531 aa14.57□□□□□ -0.08
SAMM50-206ENST00000494795 CCDC7Q96M83 1385 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms