RNA–Protein interactions for RNA: ENST00000494783.1

NOTCH1-203, Transcript of notch 1, humanhuman

TSL 3

Gene NOTCH1, Length 652 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH1-203ENST00000494783 MTUS2Q5JR59 1369 aa28.42■■■□□ 2.14
NOTCH1-203ENST00000494783 ARID4BQ4LE39 1312 aaPredicted RBP28.42■■■□□ 2.14
NOTCH1-203ENST00000494783 RICTORQ6R327 1708 aa28.4■■■□□ 2.14
NOTCH1-203ENST00000494783 AFAP1Q8N556 730 aa28.38■■■□□ 2.13
NOTCH1-203ENST00000494783 MAGI2Q86UL8 1455 aa28.38■■■□□ 2.13
NOTCH1-203ENST00000494783 ZMYM4Q5VZL5 1548 aa28.38■■■□□ 2.13
NOTCH1-203ENST00000494783 YEATS2Q9ULM3 1422 aa28.36■■■□□ 2.13
NOTCH1-203ENST00000494783 ARHGEF40Q8TER5 1519 aa28.34■■■□□ 2.13
NOTCH1-203ENST00000494783 ZFYVE16Q7Z3T8 1539 aa28.33■■■□□ 2.13
NOTCH1-203ENST00000494783 ZNF777Q9ULD5 760 aaPredicted RBP28.33■■■□□ 2.13
NOTCH1-203ENST00000494783 VPS8Q8N3P4 1428 aa28.33■■■□□ 2.13
NOTCH1-203ENST00000494783 ZNF518AQ6AHZ1 1483 aa28.33■■■□□ 2.13
NOTCH1-203ENST00000494783 GPATCH8Q9UKJ3 1502 aaKnown RBP28.33■■■□□ 2.13
NOTCH1-203ENST00000494783 CCNB3Q8WWL7 1395 aa28.32■■■□□ 2.12
NOTCH1-203ENST00000494783 CFDP1Q9UEE9 299 aaPredicted RBP28.31■■■□□ 2.12
NOTCH1-203ENST00000494783 PREX2Q70Z35 1606 aa28.3■■■□□ 2.12
NOTCH1-203ENST00000494783 CDC42BPBQ9Y5S2 1711 aa28.29■■■□□ 2.12
NOTCH1-203ENST00000494783 MYT1LQ9UL68 1186 aa28.28■■■□□ 2.12
NOTCH1-203ENST00000494783 ARHGEF12Q9NZN5 1544 aa28.27■■■□□ 2.12
NOTCH1-203ENST00000494783 TRAPPC8Q9Y2L5 1435 aa28.26■■■□□ 2.11
NOTCH1-203ENST00000494783 EHBP1L1Q8N3D4 1523 aa28.24■■■□□ 2.11
NOTCH1-203ENST00000494783 ATP10AO60312 1499 aa28.24■■■□□ 2.11
NOTCH1-203ENST00000494783 ABCC1P33527 1531 aa28.23■■■□□ 2.11
NOTCH1-203ENST00000494783 KDM5CP41229 1560 aa28.22■■■□□ 2.11
NOTCH1-203ENST00000494783 HNRNPMP52272 730 aaKnown RBP eCLIP28.22■■■□□ 2.11
NOTCH1-203ENST00000494783 CDC42BPAQ5VT25 1732 aa28.22■■■□□ 2.11
NOTCH1-203ENST00000494783 MLH3Q9UHC1 1453 aa28.19■■■□□ 2.1
NOTCH1-203ENST00000494783 C9orf84Q5VXU9 1444 aa28.18■■■□□ 2.1
NOTCH1-203ENST00000494783 MLECQ14165 292 aa28.18■■■□□ 2.1
NOTCH1-203ENST00000494783 ADAMTSL3P82987 1691 aa28.18■■■□□ 2.1
NOTCH1-203ENST00000494783 KIAA1107Q9UPP5 1409 aa28.17■■■□□ 2.1
NOTCH1-203ENST00000494783 PTPRMP28827 1452 aa28.16■■■□□ 2.1
NOTCH1-203ENST00000494783 BCORL1Q5H9F3 1711 aa28.16■■■□□ 2.1
NOTCH1-203ENST00000494783 ZNF644Q9H582 1327 aaPredicted RBP28.16■■■□□ 2.1
NOTCH1-203ENST00000494783 TIAM1Q13009 1591 aa28.16■■■□□ 2.1
NOTCH1-203ENST00000494783 SAMD9LQ8IVG5 1584 aa28.16■■■□□ 2.1
NOTCH1-203ENST00000494783 PLEKHH2Q8IVE3 1493 aa28.15■■■□□ 2.1
NOTCH1-203ENST00000494783 NCOA2Q15596 1464 aa28.14■■■□□ 2.09
NOTCH1-203ENST00000494783 SPAG9O60271 1321 aaKnown RBP28.13■■■□□ 2.09
NOTCH1-203ENST00000494783 SYCP2Q9BX26 1530 aa28.13■■■□□ 2.09
NOTCH1-203ENST00000494783 HECW2Q9P2P5 1572 aa28.12■■■□□ 2.09
NOTCH1-203ENST00000494783 KANK4Q5T7N3 995 aaPredicted RBP28.12■■■□□ 2.09
NOTCH1-203ENST00000494783 LRRC9Q6ZRR7 1453 aa28.12■■■□□ 2.09
NOTCH1-203ENST00000494783 ITSN2Q9NZM3 1697 aa28.1■■■□□ 2.09
NOTCH1-203ENST00000494783 MADDQ8WXG6 1647 aa28.09■■■□□ 2.09
NOTCH1-203ENST00000494783 SIGLEC1Q9BZZ2 1709 aa28.09■■■□□ 2.09
NOTCH1-203ENST00000494783 MAP3K1Q13233 1512 aa28.08■■■□□ 2.09
NOTCH1-203ENST00000494783 APLP2Q06481 763 aa28.07■■■□□ 2.08
NOTCH1-203ENST00000494783 DIP2CQ9Y2E4 1556 aa28.07■■■□□ 2.08
NOTCH1-203ENST00000494783 SUPT6HQ7KZ85 1726 aaKnown RBP28.04■■■□□ 2.08
NOTCH1-203ENST00000494783 PLPPR3Q6T4P5 718 aa28.02■■■□□ 2.08
NOTCH1-203ENST00000494783 ABCA6Q8N139 1617 aa28.02■■■□□ 2.08
NOTCH1-203ENST00000494783 MBD5Q9P267 1494 aa28.02■■■□□ 2.08
NOTCH1-203ENST00000494783 REREQ9P2R6 1566 aa28■■■□□ 2.07
NOTCH1-203ENST00000494783 KIDINS220Q9ULH0 1771 aa27.99■■■□□ 2.07
NOTCH1-203ENST00000494783 RSPH4AQ5TD94 716 aa27.96■■■□□ 2.07
NOTCH1-203ENST00000494783 RIMS1Q86UR5 1692 aaKnown RBP27.96■■■□□ 2.07
NOTCH1-203ENST00000494783 AGLP35573 1532 aa27.96■■■□□ 2.07
NOTCH1-203ENST00000494783 ATP7AQ04656 1500 aa27.94■■■□□ 2.06
NOTCH1-203ENST00000494783 CAMSAP2Q08AD1 1489 aa27.94■■■□□ 2.06
NOTCH1-203ENST00000494783 ESF1Q9H501 851 aaKnown RBP27.91■■■□□ 2.06
NOTCH1-203ENST00000494783 CEBPAP49715 358 aaPredicted RBP27.9■■■□□ 2.06
NOTCH1-203ENST00000494783 RTEL1-TNFRSF6BF6WH68 1400 aa27.9■■■□□ 2.06
NOTCH1-203ENST00000494783 INO80Q9ULG1 1556 aaPredicted RBP27.9■■■□□ 2.06
NOTCH1-203ENST00000494783 MYOM3Q5VTT5 1437 aa27.89■■■□□ 2.06
NOTCH1-203ENST00000494783 A2MP01023 1474 aa27.89■■■□□ 2.05
NOTCH1-203ENST00000494783 CCDC141Q6ZP82 1450 aa27.89■■■□□ 2.05
NOTCH1-203ENST00000494783 TSPY4P0CV99 314 aa27.87■■■□□ 2.05
NOTCH1-203ENST00000494783 TSPY10P0CW01 314 aa27.87■■■□□ 2.05
NOTCH1-203ENST00000494783 MIA2Q96PC5 1412 aa27.86■■■□□ 2.05
NOTCH1-203ENST00000494783 FER1L4A9Z1Z3 1794 aa27.85■■■□□ 2.05
NOTCH1-203ENST00000494783 DHX29Q7Z478 1369 aaKnown RBP27.81■■■□□ 2.04
NOTCH1-203ENST00000494783 LMTK3Q96Q04 1460 aa27.81■■■□□ 2.04
NOTCH1-203ENST00000494783 GGT6Q6P531 493 aa27.8■■■□□ 2.04
NOTCH1-203ENST00000494783 PLXNC1O60486 1568 aa27.79■■■□□ 2.04
NOTCH1-203ENST00000494783 ARHGEF5Q12774 1597 aa27.78■■■□□ 2.04
NOTCH1-203ENST00000494783 CNTLNQ9NXG0 1405 aa27.78■■■□□ 2.04
NOTCH1-203ENST00000494783 HSPA2P54652 639 aa27.76■■■□□ 2.03
NOTCH1-203ENST00000494783 PPP6R1Q9UPN7 881 aa27.74■■■□□ 2.03
NOTCH1-203ENST00000494783 KIF3BO15066 747 aa27.73■■■□□ 2.03
NOTCH1-203ENST00000494783 ADGBQ8N7X0 1667 aa27.71■■■□□ 2.03
NOTCH1-203ENST00000494783 ZMYM3Q14202 1370 aa27.71■■■□□ 2.03
NOTCH1-203ENST00000494783 FGD6Q6ZV73 1430 aa27.69■■■□□ 2.02
NOTCH1-203ENST00000494783 ABCC5O15440 1437 aa27.64■■■□□ 2.02
NOTCH1-203ENST00000494783 UHRF1BP1Q6BDS2 1440 aa27.64■■■□□ 2.02
NOTCH1-203ENST00000494783 PTPN23Q9H3S7 1636 aa27.63■■■□□ 2.01
NOTCH1-203ENST00000494783 MAST1Q9Y2H9 1570 aa27.62■■■□□ 2.01
NOTCH1-203ENST00000494783 TCOF1Q13428 1488 aaKnown RBP27.61■■■□□ 2.01
NOTCH1-203ENST00000494783 C3P01024 1663 aa27.61■■■□□ 2.01
NOTCH1-203ENST00000494783 NPATQ14207 1427 aa27.59■■■□□ 2.01
NOTCH1-203ENST00000494783 WASHC2CQ9Y4E1 1318 aa27.59■■■□□ 2.01
NOTCH1-203ENST00000494783 RRP7BPQ9NSQ0 103 aa27.58■■■□□ 2.01
NOTCH1-203ENST00000494783 DAPK1P53355 1430 aa27.58■■■□□ 2
NOTCH1-203ENST00000494783 FAM50AQ14320 339 aaKnown RBP27.57■■■□□ 2
NOTCH1-203ENST00000494783 SHANK2Q9UPX8 1470 aa27.56■■■□□ 2
NOTCH1-203ENST00000494783 PREX1Q8TCU6 1659 aa27.56■■■□□ 2
NOTCH1-203ENST00000494783 KIF15Q9NS87 1388 aa27.55■■■□□ 2
NOTCH1-203ENST00000494783 MROH2AA6NES4 1674 aa27.55■■■□□ 2
NOTCH1-203ENST00000494783 CLTCQ00610 1675 aaKnown RBP27.54■■■□□ 2
NOTCH1-203ENST00000494783 PTPRKQ15262 1439 aa27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms