RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 CDC42BPAQ5VT25 1732 aa17.39■□□□□ 0.37
APTX-230ENST00000494649 CDC42BPBQ9Y5S2 1711 aa17.39■□□□□ 0.37
APTX-230ENST00000494649 EFCAB2Q5VUJ9 269 aa17.38■□□□□ 0.37
APTX-230ENST00000494649 GPATCH8Q9UKJ3 1502 aaKnown RBP17.38■□□□□ 0.37
APTX-230ENST00000494649 SUPT6HQ7KZ85 1726 aaKnown RBP17.38■□□□□ 0.37
APTX-230ENST00000494649 MAP3K1Q13233 1512 aa17.37■□□□□ 0.37
APTX-230ENST00000494649 NEO1Q92859 1461 aa17.37■□□□□ 0.37
APTX-230ENST00000494649 PREX2Q70Z35 1606 aa17.37■□□□□ 0.37
APTX-230ENST00000494649 CFDP1Q9UEE9 299 aaPredicted RBP17.36■□□□□ 0.37
APTX-230ENST00000494649 ADGRL1O94910 1474 aa17.36■□□□□ 0.37
APTX-230ENST00000494649 ZNF644Q9H582 1327 aaPredicted RBP17.34■□□□□ 0.37
APTX-230ENST00000494649 SCAPERQ9BY12 1400 aa17.34■□□□□ 0.37
APTX-230ENST00000494649 CFAP74Q9C0B2 1584 aa17.33■□□□□ 0.36
APTX-230ENST00000494649 ARAP3Q8WWN8 1544 aa17.32■□□□□ 0.36
APTX-230ENST00000494649 DENND4BO75064 1496 aaPredicted RBP17.3■□□□□ 0.36
APTX-230ENST00000494649 AFAP1Q8N556 730 aa17.3■□□□□ 0.36
APTX-230ENST00000494649 PHLDB1Q86UU1 1377 aa17.3■□□□□ 0.36
APTX-230ENST00000494649 HNRNPMP52272 730 aaKnown RBP eCLIP17.3■□□□□ 0.36
APTX-230ENST00000494649 SAMD9LQ8IVG5 1584 aa17.3■□□□□ 0.36
APTX-230ENST00000494649 FRMPD1Q5SYB0 1578 aa17.29■□□□□ 0.36
APTX-230ENST00000494649 ARHGEF12Q9NZN5 1544 aa17.29■□□□□ 0.36
APTX-230ENST00000494649 MYT1LQ9UL68 1186 aa17.28■□□□□ 0.36
APTX-230ENST00000494649 ITSN2Q9NZM3 1697 aa17.28■□□□□ 0.36
APTX-230ENST00000494649 SYCP2Q9BX26 1530 aa17.27■□□□□ 0.36
APTX-230ENST00000494649 ABCC1P33527 1531 aa17.27■□□□□ 0.35
APTX-230ENST00000494649 TRAPPC8Q9Y2L5 1435 aa17.26■□□□□ 0.35
APTX-230ENST00000494649 RICTORQ6R327 1708 aa17.26■□□□□ 0.35
APTX-230ENST00000494649 POGZQ7Z3K3 1410 aa17.26■□□□□ 0.35
APTX-230ENST00000494649 MYOM3Q5VTT5 1437 aa17.25■□□□□ 0.35
APTX-230ENST00000494649 CAMSAP2Q08AD1 1489 aa17.23■□□□□ 0.35
APTX-230ENST00000494649 YEATS2Q9ULM3 1422 aa17.21■□□□□ 0.35
APTX-230ENST00000494649 ZNF518AQ6AHZ1 1483 aa17.21■□□□□ 0.35
APTX-230ENST00000494649 FGD6Q6ZV73 1430 aa17.18■□□□□ 0.34
APTX-230ENST00000494649 FAM50AQ14320 339 aaKnown RBP17.17■□□□□ 0.34
APTX-230ENST00000494649 PLEKHH2Q8IVE3 1493 aa17.17■□□□□ 0.34
APTX-230ENST00000494649 MBD5Q9P267 1494 aa17.17■□□□□ 0.34
APTX-230ENST00000494649 KIAA1107Q9UPP5 1409 aa17.16■□□□□ 0.34
APTX-230ENST00000494649 MIA2Q96PC5 1412 aa17.16■□□□□ 0.34
APTX-230ENST00000494649 ZFYVE16Q7Z3T8 1539 aa17.16■□□□□ 0.34
APTX-230ENST00000494649 KDM5CP41229 1560 aa17.16■□□□□ 0.34
APTX-230ENST00000494649 ZMYM4Q5VZL5 1548 aa17.15■□□□□ 0.34
APTX-230ENST00000494649 SPAG9O60271 1321 aaKnown RBP17.15■□□□□ 0.34
APTX-230ENST00000494649 PTPN23Q9H3S7 1636 aa17.15■□□□□ 0.34
APTX-230ENST00000494649 ARID4BQ4LE39 1312 aaPredicted RBP17.15■□□□□ 0.34
APTX-230ENST00000494649 HECW2Q9P2P5 1572 aa17.14■□□□□ 0.33
APTX-230ENST00000494649 ARHGEF40Q8TER5 1519 aa17.13■□□□□ 0.33
APTX-230ENST00000494649 CCDC141Q6ZP82 1450 aa17.11■□□□□ 0.33
APTX-230ENST00000494649 ABCA6Q8N139 1617 aa17.1■□□□□ 0.33
APTX-230ENST00000494649 ITGAEP38570 1179 aa17.1■□□□□ 0.33
APTX-230ENST00000494649 MLECQ14165 292 aa17.1■□□□□ 0.33
APTX-230ENST00000494649 KIDINS220Q9ULH0 1771 aa17.1■□□□□ 0.33
APTX-230ENST00000494649 MAGI2Q86UL8 1455 aa17.1■□□□□ 0.33
APTX-230ENST00000494649 MLH3Q9UHC1 1453 aa17.1■□□□□ 0.33
APTX-230ENST00000494649 SIGLEC1Q9BZZ2 1709 aa17.09■□□□□ 0.33
APTX-230ENST00000494649 CHIC2Q9UKJ5 165 aa17.09■□□□□ 0.33
APTX-230ENST00000494649 ATP7AQ04656 1500 aa17.09■□□□□ 0.33
APTX-230ENST00000494649 TSPY4P0CV99 314 aa17.08■□□□□ 0.33
APTX-230ENST00000494649 TSPY10P0CW01 314 aa17.08■□□□□ 0.33
APTX-230ENST00000494649 DIP2CQ9Y2E4 1556 aa17.08■□□□□ 0.32
APTX-230ENST00000494649 ATP10AO60312 1499 aa17.07■□□□□ 0.32
APTX-230ENST00000494649 TCOF1Q13428 1488 aaKnown RBP17.07■□□□□ 0.32
APTX-230ENST00000494649 ARHGEF5Q12774 1597 aa17.06■□□□□ 0.32
APTX-230ENST00000494649 INO80Q9ULG1 1556 aaPredicted RBP17.06■□□□□ 0.32
APTX-230ENST00000494649 KDM4FA0A1W2PPD8 638 aa17.06■□□□□ 0.32
APTX-230ENST00000494649 ABCC5O15440 1437 aa17.05■□□□□ 0.32
APTX-230ENST00000494649 C9orf84Q5VXU9 1444 aa17.05■□□□□ 0.32
APTX-230ENST00000494649 RSPH4AQ5TD94 716 aa17.05■□□□□ 0.32
APTX-230ENST00000494649 DAPK1P53355 1430 aa17.04■□□□□ 0.32
APTX-230ENST00000494649 DNMT1P26358 1616 aaKnown RBP17.02■□□□□ 0.31
APTX-230ENST00000494649 PLPPR3Q6T4P5 718 aa17.01■□□□□ 0.31
APTX-230ENST00000494649 RRP7BPQ9NSQ0 103 aa17.01■□□□□ 0.31
APTX-230ENST00000494649 RTEL1-TNFRSF6BF6WH68 1400 aa16.99■□□□□ 0.31
APTX-230ENST00000494649 CROCC2H7BZ55 1655 aa16.99■□□□□ 0.31
APTX-230ENST00000494649 A2MP01023 1474 aa16.99■□□□□ 0.31
APTX-230ENST00000494649 PTPRKQ15262 1439 aa16.98■□□□□ 0.31
APTX-230ENST00000494649 ADGBQ8N7X0 1667 aa16.97■□□□□ 0.31
APTX-230ENST00000494649 RRBP1Q9P2E9 1410 aaKnown RBP16.97■□□□□ 0.31
APTX-230ENST00000494649 GGT6Q6P531 493 aa16.97■□□□□ 0.31
APTX-230ENST00000494649 BCORL1Q5H9F3 1711 aa16.96■□□□□ 0.31
APTX-230ENST00000494649 MAST1Q9Y2H9 1570 aa16.95■□□□□ 0.3
APTX-230ENST00000494649 KIF3BO15066 747 aa16.95■□□□□ 0.3
APTX-230ENST00000494649 KIF15Q9NS87 1388 aa16.95■□□□□ 0.3
APTX-230ENST00000494649 SHANK2Q9UPX8 1470 aa16.94■□□□□ 0.3
APTX-230ENST00000494649 DHX29Q7Z478 1369 aaKnown RBP16.94■□□□□ 0.3
APTX-230ENST00000494649 MADDQ8WXG6 1647 aa16.94■□□□□ 0.3
APTX-230ENST00000494649 PLXNC1O60486 1568 aa16.93■□□□□ 0.3
APTX-230ENST00000494649 REREQ9P2R6 1566 aa16.93■□□□□ 0.3
APTX-230ENST00000494649 ANKRD30AQ9BXX3 1397 aa16.92■□□□□ 0.3
APTX-230ENST00000494649 ADAMTSL3P82987 1691 aa16.91■□□□□ 0.3
APTX-230ENST00000494649 NCOA1Q15788 1441 aa16.91■□□□□ 0.3
APTX-230ENST00000494649 AGLP35573 1532 aa16.9■□□□□ 0.3
APTX-230ENST00000494649 RIMS1Q86UR5 1692 aaKnown RBP16.89■□□□□ 0.3
APTX-230ENST00000494649 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.88■□□□□ 0.29
APTX-230ENST00000494649 CEBPAP49715 358 aaPredicted RBP16.88■□□□□ 0.29
APTX-230ENST00000494649 ESF1Q9H501 851 aaKnown RBP16.88■□□□□ 0.29
APTX-230ENST00000494649 FER1L4A9Z1Z3 1794 aa16.87■□□□□ 0.29
APTX-230ENST00000494649 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.87■□□□□ 0.29
APTX-230ENST00000494649 DUOX2Q9NRD8 1548 aa16.87■□□□□ 0.29
APTX-230ENST00000494649 ADGRL2O95490 1459 aa16.86■□□□□ 0.29
APTX-230ENST00000494649 PTPRMP28827 1452 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms