RNA–Protein interactions for RNA: ENST00000494620.1

SCRN1-209, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-209ENST00000494620 HECW2Q9P2P5 1572 aa17.45■□□□□ 0.38
SCRN1-209ENST00000494620 ARHGAP5Q13017 1502 aa17.44■□□□□ 0.38
SCRN1-209ENST00000494620 MAGI2Q86UL8 1455 aa17.44■□□□□ 0.38
SCRN1-209ENST00000494620 POGZQ7Z3K3 1410 aa17.42■□□□□ 0.38
SCRN1-209ENST00000494620 AFAP1Q8N556 730 aa17.42■□□□□ 0.38
SCRN1-209ENST00000494620 CFDP1Q9UEE9 299 aaPredicted RBP17.42■□□□□ 0.38
SCRN1-209ENST00000494620 CCNB3Q8WWL7 1395 aa17.4■□□□□ 0.38
SCRN1-209ENST00000494620 MYO5CQ9NQX4 1742 aa17.38■□□□□ 0.37
SCRN1-209ENST00000494620 APLP2Q06481 763 aa17.38■□□□□ 0.37
SCRN1-209ENST00000494620 ZNF518AQ6AHZ1 1483 aa17.37■□□□□ 0.37
SCRN1-209ENST00000494620 MLECQ14165 292 aa17.36■□□□□ 0.37
SCRN1-209ENST00000494620 ZFYVE16Q7Z3T8 1539 aa17.36■□□□□ 0.37
SCRN1-209ENST00000494620 FRMPD1Q5SYB0 1578 aa17.35■□□□□ 0.37
SCRN1-209ENST00000494620 ATP10AO60312 1499 aa17.34■□□□□ 0.37
SCRN1-209ENST00000494620 YEATS2Q9ULM3 1422 aa17.34■□□□□ 0.37
SCRN1-209ENST00000494620 ZMYM4Q5VZL5 1548 aa17.33■□□□□ 0.37
SCRN1-209ENST00000494620 HNRNPMP52272 730 aaKnown RBP eCLIP17.33■□□□□ 0.36
SCRN1-209ENST00000494620 RICTORQ6R327 1708 aa17.33■□□□□ 0.36
SCRN1-209ENST00000494620 LRRIQ1Q96JM4 1722 aa17.33■□□□□ 0.36
SCRN1-209ENST00000494620 ESF1Q9H501 851 aaKnown RBP17.32■□□□□ 0.36
SCRN1-209ENST00000494620 GPATCH8Q9UKJ3 1502 aaKnown RBP17.31■□□□□ 0.36
SCRN1-209ENST00000494620 ARHGEF40Q8TER5 1519 aa17.31■□□□□ 0.36
SCRN1-209ENST00000494620 VPS8Q8N3P4 1428 aa17.3■□□□□ 0.36
SCRN1-209ENST00000494620 SPAG9O60271 1321 aaKnown RBP17.3■□□□□ 0.36
SCRN1-209ENST00000494620 PLEKHH2Q8IVE3 1493 aa17.3■□□□□ 0.36
SCRN1-209ENST00000494620 C9orf84Q5VXU9 1444 aa17.3■□□□□ 0.36
SCRN1-209ENST00000494620 PLPPR3Q6T4P5 718 aa17.29■□□□□ 0.36
SCRN1-209ENST00000494620 RSPH4AQ5TD94 716 aa17.28■□□□□ 0.36
SCRN1-209ENST00000494620 KIAA1107Q9UPP5 1409 aa17.28■□□□□ 0.36
SCRN1-209ENST00000494620 TRAPPC8Q9Y2L5 1435 aa17.28■□□□□ 0.36
SCRN1-209ENST00000494620 PTPRMP28827 1452 aa17.27■□□□□ 0.36
SCRN1-209ENST00000494620 MLH3Q9UHC1 1453 aa17.27■□□□□ 0.36
SCRN1-209ENST00000494620 PREX2Q70Z35 1606 aa17.27■□□□□ 0.36
SCRN1-209ENST00000494620 EHBP1L1Q8N3D4 1523 aa17.26■□□□□ 0.35
SCRN1-209ENST00000494620 CDC42BPBQ9Y5S2 1711 aa17.25■□□□□ 0.35
SCRN1-209ENST00000494620 ADAMTSL3P82987 1691 aa17.23■□□□□ 0.35
SCRN1-209ENST00000494620 ABCC1P33527 1531 aa17.23■□□□□ 0.35
SCRN1-209ENST00000494620 ARHGEF12Q9NZN5 1544 aa17.23■□□□□ 0.35
SCRN1-209ENST00000494620 BCORL1Q5H9F3 1711 aa17.23■□□□□ 0.35
SCRN1-209ENST00000494620 TSPY4P0CV99 314 aa17.22■□□□□ 0.35
SCRN1-209ENST00000494620 TSPY10P0CW01 314 aa17.22■□□□□ 0.35
SCRN1-209ENST00000494620 KDM5CP41229 1560 aa17.22■□□□□ 0.35
SCRN1-209ENST00000494620 ZNF644Q9H582 1327 aaPredicted RBP17.21■□□□□ 0.35
SCRN1-209ENST00000494620 CDC42BPAQ5VT25 1732 aa17.21■□□□□ 0.35
SCRN1-209ENST00000494620 NCOA2Q15596 1464 aa17.19■□□□□ 0.34
SCRN1-209ENST00000494620 KANK4Q5T7N3 995 aaPredicted RBP17.18■□□□□ 0.34
SCRN1-209ENST00000494620 FBXO41Q8TF61 875 aa17.18■□□□□ 0.34
SCRN1-209ENST00000494620 LRRC9Q6ZRR7 1453 aa17.18■□□□□ 0.34
SCRN1-209ENST00000494620 SYCP2Q9BX26 1530 aa17.17■□□□□ 0.34
SCRN1-209ENST00000494620 TIAM1Q13009 1591 aa17.17■□□□□ 0.34
SCRN1-209ENST00000494620 MADDQ8WXG6 1647 aa17.17■□□□□ 0.34
SCRN1-209ENST00000494620 MAP3K1Q13233 1512 aa17.16■□□□□ 0.34
SCRN1-209ENST00000494620 SAMD9LQ8IVG5 1584 aa17.16■□□□□ 0.34
SCRN1-209ENST00000494620 ITSN2Q9NZM3 1697 aa17.15■□□□□ 0.34
SCRN1-209ENST00000494620 SUPT6HQ7KZ85 1726 aaKnown RBP17.15■□□□□ 0.34
SCRN1-209ENST00000494620 CEBPAP49715 358 aaPredicted RBP17.14■□□□□ 0.33
SCRN1-209ENST00000494620 PPP6R1Q9UPN7 881 aa17.14■□□□□ 0.33
SCRN1-209ENST00000494620 GGT6Q6P531 493 aa17.13■□□□□ 0.33
SCRN1-209ENST00000494620 DIP2CQ9Y2E4 1556 aa17.13■□□□□ 0.33
SCRN1-209ENST00000494620 RTEL1-TNFRSF6BF6WH68 1400 aa17.13■□□□□ 0.33
SCRN1-209ENST00000494620 AGLP35573 1532 aa17.12■□□□□ 0.33
SCRN1-209ENST00000494620 REREQ9P2R6 1566 aa17.12■□□□□ 0.33
SCRN1-209ENST00000494620 RIMS1Q86UR5 1692 aaKnown RBP17.11■□□□□ 0.33
SCRN1-209ENST00000494620 MBD5Q9P267 1494 aa17.11■□□□□ 0.33
SCRN1-209ENST00000494620 CNTLNQ9NXG0 1405 aa17.1■□□□□ 0.33
SCRN1-209ENST00000494620 A2MP01023 1474 aa17.1■□□□□ 0.33
SCRN1-209ENST00000494620 ATP7AQ04656 1500 aa17.09■□□□□ 0.33
SCRN1-209ENST00000494620 KIDINS220Q9ULH0 1771 aa17.08■□□□□ 0.33
SCRN1-209ENST00000494620 ABCA6Q8N139 1617 aa17.08■□□□□ 0.32
SCRN1-209ENST00000494620 MIA2Q96PC5 1412 aa17.08■□□□□ 0.32
SCRN1-209ENST00000494620 CCDC141Q6ZP82 1450 aa17.07■□□□□ 0.32
SCRN1-209ENST00000494620 DHX29Q7Z478 1369 aaKnown RBP17.07■□□□□ 0.32
SCRN1-209ENST00000494620 KIF3BO15066 747 aa17.07■□□□□ 0.32
SCRN1-209ENST00000494620 CAMSAP2Q08AD1 1489 aa17.06■□□□□ 0.32
SCRN1-209ENST00000494620 HSPA2P54652 639 aa17.06■□□□□ 0.32
SCRN1-209ENST00000494620 MYOM3Q5VTT5 1437 aa17.05■□□□□ 0.32
SCRN1-209ENST00000494620 FER1L4A9Z1Z3 1794 aa17.05■□□□□ 0.32
SCRN1-209ENST00000494620 SIGLEC1Q9BZZ2 1709 aa17.04■□□□□ 0.32
SCRN1-209ENST00000494620 ZMYM3Q14202 1370 aa17.03■□□□□ 0.32
SCRN1-209ENST00000494620 DMRT2Q9Y5R5 561 aa17.03■□□□□ 0.32
SCRN1-209ENST00000494620 LMTK3Q96Q04 1460 aa17.01■□□□□ 0.31
SCRN1-209ENST00000494620 UHRF1BP1Q6BDS2 1440 aa17.01■□□□□ 0.31
SCRN1-209ENST00000494620 WASHC2CQ9Y4E1 1318 aa17■□□□□ 0.31
SCRN1-209ENST00000494620 INO80Q9ULG1 1556 aaPredicted RBP16.99■□□□□ 0.31
SCRN1-209ENST00000494620 SETD1BQ9UPS6 1966 aaKnown RBP16.99■□□□□ 0.31
SCRN1-209ENST00000494620 ARHGEF5Q12774 1597 aa16.97■□□□□ 0.31
SCRN1-209ENST00000494620 FAM50AQ14320 339 aaKnown RBP16.96■□□□□ 0.31
SCRN1-209ENST00000494620 ADGBQ8N7X0 1667 aa16.95■□□□□ 0.3
SCRN1-209ENST00000494620 NPATQ14207 1427 aa16.95■□□□□ 0.3
SCRN1-209ENST00000494620 RRP7BPQ9NSQ0 103 aa16.94■□□□□ 0.3
SCRN1-209ENST00000494620 PLXNC1O60486 1568 aa16.94■□□□□ 0.3
SCRN1-209ENST00000494620 FGD6Q6ZV73 1430 aa16.92■□□□□ 0.3
SCRN1-209ENST00000494620 CHIC2Q9UKJ5 165 aa16.91■□□□□ 0.3
SCRN1-209ENST00000494620 ANKRD30AQ9BXX3 1397 aa16.89■□□□□ 0.3
SCRN1-209ENST00000494620 ABCC5O15440 1437 aa16.88■□□□□ 0.29
SCRN1-209ENST00000494620 PREX1Q8TCU6 1659 aa16.88■□□□□ 0.29
SCRN1-209ENST00000494620 KIF15Q9NS87 1388 aa16.88■□□□□ 0.29
SCRN1-209ENST00000494620 C3P01024 1663 aa16.88■□□□□ 0.29
SCRN1-209ENST00000494620 PTPRKQ15262 1439 aa16.87■□□□□ 0.29
SCRN1-209ENST00000494620 MAST1Q9Y2H9 1570 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms