RNA–Protein interactions for RNA: ENST00000494569.5

ZIC4-216, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 3,317 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-216ENST00000494569 CDC42BPAQ5VT25 1732 aa16.43■□□□□ 0.22
ZIC4-216ENST00000494569 TSPOAP1O95153 1857 aa16.42■□□□□ 0.22
ZIC4-216ENST00000494569 HFM1A2PYH4 1435 aa16.42■□□□□ 0.22
ZIC4-216ENST00000494569 ITSN2Q9NZM3 1697 aa16.42■□□□□ 0.22
ZIC4-216ENST00000494569 PPRC1Q5VV67 1664 aaKnown RBP16.41■□□□□ 0.22
ZIC4-216ENST00000494569 ADGBQ8N7X0 1667 aa16.4■□□□□ 0.22
ZIC4-216ENST00000494569 UHRF1BP1LA0JNW5 1464 aa16.4■□□□□ 0.22
ZIC4-216ENST00000494569 KIF14Q15058 1648 aa16.4■□□□□ 0.22
ZIC4-216ENST00000494569 ABCC2Q92887 1545 aa16.4■□□□□ 0.22
ZIC4-216ENST00000494569 TROQ12816 1431 aaPredicted RBP16.38■□□□□ 0.21
ZIC4-216ENST00000494569 PTPRGP23470 1445 aa16.37■□□□□ 0.21
ZIC4-216ENST00000494569 NAIPQ13075 1403 aa16.36■□□□□ 0.21
ZIC4-216ENST00000494569 ATP10BO94823 1461 aa16.35■□□□□ 0.21
ZIC4-216ENST00000494569 FAM50AQ14320 339 aaKnown RBP16.33■□□□□ 0.2
ZIC4-216ENST00000494569 MAP3K4Q9Y6R4 1608 aa16.33■□□□□ 0.2
ZIC4-216ENST00000494569 ASXL2Q76L83 1435 aa16.32■□□□□ 0.2
ZIC4-216ENST00000494569 ADGRL1O94910 1474 aa16.3■□□□□ 0.2
ZIC4-216ENST00000494569 CDC42BPBQ9Y5S2 1711 aa16.3■□□□□ 0.2
ZIC4-216ENST00000494569 GPATCH8Q9UKJ3 1502 aaKnown RBP16.29■□□□□ 0.2
ZIC4-216ENST00000494569 TEX14Q8IWB6 1497 aa16.28■□□□□ 0.2
ZIC4-216ENST00000494569 UACAQ9BZF9 1416 aa16.28■□□□□ 0.2
ZIC4-216ENST00000494569 ITGAEP38570 1179 aa16.27■□□□□ 0.2
ZIC4-216ENST00000494569 PREX2Q70Z35 1606 aa16.27■□□□□ 0.19
ZIC4-216ENST00000494569 ILDR1Q86SU0 546 aaPredicted RBP16.27■□□□□ 0.19
ZIC4-216ENST00000494569 ADGRL2O95490 1459 aa16.26■□□□□ 0.19
ZIC4-216ENST00000494569 DAXXQ9UER7 740 aaPredicted RBP16.26■□□□□ 0.19
ZIC4-216ENST00000494569 DAPK1P53355 1430 aa16.26■□□□□ 0.19
ZIC4-216ENST00000494569 ROCK1Q13464 1354 aa16.25■□□□□ 0.19
ZIC4-216ENST00000494569 ABCC5O15440 1437 aa16.25■□□□□ 0.19
ZIC4-216ENST00000494569 CAMSAP2Q08AD1 1489 aa16.24■□□□□ 0.19
ZIC4-216ENST00000494569 CDK11AQ9UQ88 783 aaPredicted RBP16.23■□□□□ 0.19
ZIC4-216ENST00000494569 ZCCHC11Q5TAX3 1644 aaKnown RBP16.23■□□□□ 0.19
ZIC4-216ENST00000494569 COL17A1Q9UMD9 1497 aaPredicted RBP16.22■□□□□ 0.19
ZIC4-216ENST00000494569 ARHGEF5Q12774 1597 aa16.22■□□□□ 0.19
ZIC4-216ENST00000494569 HECW2Q9P2P5 1572 aa16.21■□□□□ 0.19
ZIC4-216ENST00000494569 SHANK2Q9UPX8 1470 aa16.18■□□□□ 0.18
ZIC4-216ENST00000494569 ZNF316A6NFI3 1004 aaPredicted RBP16.18■□□□□ 0.18
ZIC4-216ENST00000494569 ARID3CA6NKF2 412 aa16.18■□□□□ 0.18
ZIC4-216ENST00000494569 KDM5DQ9BY66 1539 aa16.17■□□□□ 0.18
ZIC4-216ENST00000494569 MAST1Q9Y2H9 1570 aa16.17■□□□□ 0.18
ZIC4-216ENST00000494569 SCAF1Q9H7N4 1312 aaKnown RBP16.17■□□□□ 0.18
ZIC4-216ENST00000494569 SAMD9LQ8IVG5 1584 aa16.17■□□□□ 0.18
ZIC4-216ENST00000494569 POLR1AO95602 1720 aaPredicted RBP16.16■□□□□ 0.18
ZIC4-216ENST00000494569 TTC37Q6PGP7 1564 aa16.15■□□□□ 0.18
ZIC4-216ENST00000494569 WDR7Q9Y4E6 1490 aa16.15■□□□□ 0.18
ZIC4-216ENST00000494569 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.14■□□□□ 0.17
ZIC4-216ENST00000494569 ZNF644Q9H582 1327 aaPredicted RBP16.14■□□□□ 0.17
ZIC4-216ENST00000494569 MYO5CQ9NQX4 1742 aa16.12■□□□□ 0.17
ZIC4-216ENST00000494569 TIMELESSQ9UNS1 1208 aa16.11■□□□□ 0.17
ZIC4-216ENST00000494569 MBD5Q9P267 1494 aa16.11■□□□□ 0.17
ZIC4-216ENST00000494569 PLEKHD1A6NEE1 506 aa16.1■□□□□ 0.17
ZIC4-216ENST00000494569 NCOA1Q15788 1441 aa16.1■□□□□ 0.17
ZIC4-216ENST00000494569 PZPP20742 1482 aa16.09■□□□□ 0.17
ZIC4-216ENST00000494569 PLXNC1O60486 1568 aa16.08■□□□□ 0.16
ZIC4-216ENST00000494569 ACIN1Q9UKV3 1341 aaKnown RBP16.07■□□□□ 0.16
ZIC4-216ENST00000494569 UNC13BO14795 1591 aa16.06■□□□□ 0.16
ZIC4-216ENST00000494569 DIEXFQ68CQ4 756 aaKnown RBP16.06■□□□□ 0.16
ZIC4-216ENST00000494569 CFDP1Q9UEE9 299 aaPredicted RBP16.06■□□□□ 0.16
ZIC4-216ENST00000494569 ARAP3Q8WWN8 1544 aa16.04■□□□□ 0.16
ZIC4-216ENST00000494569 RRP7BPQ9NSQ0 103 aa16.04■□□□□ 0.16
ZIC4-216ENST00000494569 CD109Q6YHK3 1445 aa16.04■□□□□ 0.16
ZIC4-216ENST00000494569 SIN3AQ96ST3 1273 aa16.03■□□□□ 0.16
ZIC4-216ENST00000494569 CHIC2Q9UKJ5 165 aa16.02■□□□□ 0.16
ZIC4-216ENST00000494569 ABCA9Q8IUA7 1624 aa16■□□□□ 0.15
ZIC4-216ENST00000494569 MAGI2Q86UL8 1455 aa16■□□□□ 0.15
ZIC4-216ENST00000494569 C9orf84Q5VXU9 1444 aa16■□□□□ 0.15
ZIC4-216ENST00000494569 KIAA1107Q9UPP5 1409 aa16■□□□□ 0.15
ZIC4-216ENST00000494569 CCDC141Q6ZP82 1450 aa16■□□□□ 0.15
ZIC4-216ENST00000494569 RPRD2Q5VT52 1461 aaKnown RBP15.98■□□□□ 0.15
ZIC4-216ENST00000494569 SYCP2Q9BX26 1530 aa15.98■□□□□ 0.15
ZIC4-216ENST00000494569 PLCH2O75038 1416 aa15.98■□□□□ 0.15
ZIC4-216ENST00000494569 ADAMTSL3P82987 1691 aa15.98■□□□□ 0.15
ZIC4-216ENST00000494569 ABCC1P33527 1531 aa15.97■□□□□ 0.15
ZIC4-216ENST00000494569 ARHGEF12Q9NZN5 1544 aa15.97■□□□□ 0.15
ZIC4-216ENST00000494569 ANKRD30AQ9BXX3 1397 aa15.97■□□□□ 0.15
ZIC4-216ENST00000494569 ANKRD30BQ9BXX2 1392 aa15.97■□□□□ 0.15
ZIC4-216ENST00000494569 PLEKHH2Q8IVE3 1493 aa15.96■□□□□ 0.15
ZIC4-216ENST00000494569 DEPDC5O75140 1603 aa15.96■□□□□ 0.15
ZIC4-216ENST00000494569 PPP1R15AO75807 674 aaPredicted RBP15.96■□□□□ 0.15
ZIC4-216ENST00000494569 IQGAP3Q86VI3 1631 aa15.96■□□□□ 0.15
ZIC4-216ENST00000494569 ARHGAP5Q13017 1502 aa15.96■□□□□ 0.14
ZIC4-216ENST00000494569 NEUROD1Q13562 356 aa15.95■□□□□ 0.14
ZIC4-216ENST00000494569 MPHOSPH9Q99550 1183 aa15.95■□□□□ 0.14
ZIC4-216ENST00000494569 ERICH6Q7L0X2 663 aa15.94■□□□□ 0.14
ZIC4-216ENST00000494569 FBXO41Q8TF61 875 aa15.94■□□□□ 0.14
ZIC4-216ENST00000494569 ANKRD50Q9ULJ7 1429 aa15.93■□□□□ 0.14
ZIC4-216ENST00000494569 RSPH4AQ5TD94 716 aa15.91■□□□□ 0.14
ZIC4-216ENST00000494569 NEO1Q92859 1461 aa15.9■□□□□ 0.14
ZIC4-216ENST00000494569 PTPRMP28827 1452 aa15.9■□□□□ 0.14
ZIC4-216ENST00000494569 INO80Q9ULG1 1556 aaPredicted RBP15.9■□□□□ 0.14
ZIC4-216ENST00000494569 BCORL1Q5H9F3 1711 aa15.89■□□□□ 0.13
ZIC4-216ENST00000494569 ZNF777Q9ULD5 760 aaPredicted RBP15.88■□□□□ 0.13
ZIC4-216ENST00000494569 HNRNPMP52272 730 aaKnown RBP eCLIP15.87■□□□□ 0.13
ZIC4-216ENST00000494569 SPATA31E1Q6ZUB1 1445 aa15.86■□□□□ 0.13
ZIC4-216ENST00000494569 KIF15Q9NS87 1388 aa15.86■□□□□ 0.13
ZIC4-216ENST00000494569 MIER1Q8N108 512 aa15.86■□□□□ 0.13
ZIC4-216ENST00000494569 TONSLQ96HA7 1378 aa15.86■□□□□ 0.13
ZIC4-216ENST00000494569 VWDEQ8N2E2 1590 aa15.86■□□□□ 0.13
ZIC4-216ENST00000494569 FRMPD1Q5SYB0 1578 aa15.85■□□□□ 0.13
ZIC4-216ENST00000494569 KCNH8Q96L42 1107 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms