RNA–Protein interactions for RNA: ENST00000494509.1

AC055758.1-201, humanhuman

TSL 3 BASIC

Gene AC055758.1, Length 569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055758.1-201ENST00000494509 ZNF710Q8N1W2 664 aa12.38□□□□□ -0.43
AC055758.1-201ENST00000494509 FBXO22Q8NEZ5 403 aa12.38□□□□□ -0.43
AC055758.1-201ENST00000494509 STK24Q9Y6E0 443 aa12.34□□□□□ -0.43
AC055758.1-201ENST00000494509 MFRPQ9BY79 579 aa12.33□□□□□ -0.44
AC055758.1-201ENST00000494509 ERBB3P21860 1342 aa12.32□□□□□ -0.44
AC055758.1-201ENST00000494509 ECM2O94769 699 aaPredicted RBP12.31□□□□□ -0.44
AC055758.1-201ENST00000494509 NLRP6P59044 892 aa12.31□□□□□ -0.44
AC055758.1-201ENST00000494509 PKD2Q13563 968 aa12.31□□□□□ -0.44
AC055758.1-201ENST00000494509 GPR153Q6NV75 609 aa12.3□□□□□ -0.44
AC055758.1-201ENST00000494509 RGL2O15211 777 aa12.29□□□□□ -0.44
AC055758.1-201ENST00000494509 STK25O00506 426 aa12.28□□□□□ -0.44
AC055758.1-201ENST00000494509 VARS2Q5ST30 1063 aaKnown RBP12.28□□□□□ -0.44
AC055758.1-201ENST00000494509 RIMBP2O15034 1052 aa12.26□□□□□ -0.45
AC055758.1-201ENST00000494509 KHSRPQ92945 711 aaKnown RBP eCLIP12.25□□□□□ -0.45
AC055758.1-201ENST00000494509 ZSWIM6Q9HCJ5 1215 aa12.24□□□□□ -0.45
AC055758.1-201ENST00000494509 ARSIQ5FYB1 569 aa12.22□□□□□ -0.45
AC055758.1-201ENST00000494509 TAOK2Q9UL54 1235 aa12.22□□□□□ -0.45
AC055758.1-201ENST00000494509 KIF3CO14782 793 aa12.2□□□□□ -0.46
AC055758.1-201ENST00000494509 C2orf72A6NCS6 295 aa12.18□□□□□ -0.46
AC055758.1-201ENST00000494509 ZNF687Q8N1G0 1237 aa12.17□□□□□ -0.46
AC055758.1-201ENST00000494509 RB1CC1Q8TDY2 1594 aa12.15□□□□□ -0.46
AC055758.1-201ENST00000494509 PPP1R37O75864 691 aa12.15□□□□□ -0.46
AC055758.1-201ENST00000494509 ZNF316A6NFI3 1004 aaPredicted RBP12.1□□□□□ -0.47
AC055758.1-201ENST00000494509 NUDT7P0C024 238 aa12.07□□□□□ -0.48
AC055758.1-201ENST00000494509 RNF166Q96A37 237 aaPredicted RBP12.06□□□□□ -0.48
AC055758.1-201ENST00000494509 POTEEQ6S8J3 1075 aa12.03□□□□□ -0.48
AC055758.1-201ENST00000494509 MYT1LQ9UL68 1186 aa12.03□□□□□ -0.48
AC055758.1-201ENST00000494509 PCDHGA4Q9Y5G9 962 aa12.03□□□□□ -0.48
AC055758.1-201ENST00000494509 SLC34A2O95436 690 aa12.01□□□□□ -0.49
AC055758.1-201ENST00000494509 TMC2Q8TDI7 906 aa12.01□□□□□ -0.49
AC055758.1-201ENST00000494509 LHX6Q9UPM6 363 aa12.01□□□□□ -0.49
AC055758.1-201ENST00000494509 ANKRD13DQ6ZTN6 518 aa12□□□□□ -0.49
AC055758.1-201ENST00000494509 UNC13AQ9UPW8 1703 aa12□□□□□ -0.49
AC055758.1-201ENST00000494509 HS6ST3Q8IZP7 471 aa11.97□□□□□ -0.49
AC055758.1-201ENST00000494509 LSM11P83369 360 aaKnown RBP eCLIP11.96□□□□□ -0.49
AC055758.1-201ENST00000494509 AXIN2Q9Y2T1 843 aa11.96□□□□□ -0.49
AC055758.1-201ENST00000494509 NACADO15069 1562 aa11.93□□□□□ -0.5
AC055758.1-201ENST00000494509 KDM4FA0A1W2PPD8 638 aa11.93□□□□□ -0.5
AC055758.1-201ENST00000494509 NKX1-1Q15270 411 aaPredicted RBP11.91□□□□□ -0.5
AC055758.1-201ENST00000494509 CHGAP10645 457 aaKnown RBP11.89□□□□□ -0.51
AC055758.1-201ENST00000494509 PTGER2P43116 358 aa11.88□□□□□ -0.51
AC055758.1-201ENST00000494509 FOXK1P85037 733 aa11.88□□□□□ -0.51
AC055758.1-201ENST00000494509 DSG2Q14126 1118 aa11.88□□□□□ -0.51
AC055758.1-201ENST00000494509 PLPP6Q8IY26 295 aa11.88□□□□□ -0.51
AC055758.1-201ENST00000494509 PTCD2Q8WV60 388 aaKnown RBP11.88□□□□□ -0.51
AC055758.1-201ENST00000494509 PBX2P40425 430 aa11.87□□□□□ -0.51
AC055758.1-201ENST00000494509 GPHNQ9NQX3 736 aaPredicted RBP11.87□□□□□ -0.51
AC055758.1-201ENST00000494509 DMRTA1Q5VZB9 504 aa11.81□□□□□ -0.52
AC055758.1-201ENST00000494509 DNAJC5Q9H3Z4 198 aa11.81□□□□□ -0.52
AC055758.1-201ENST00000494509 BICRAQ9NZM4 1560 aa11.79□□□□□ -0.52
AC055758.1-201ENST00000494509 ARHGAP33O14559 1287 aa11.79□□□□□ -0.52
AC055758.1-201ENST00000494509 PSEN2P49810 448 aa11.79□□□□□ -0.52
AC055758.1-201ENST00000494509 DCAF8L2P0C7V8 631 aa11.78□□□□□ -0.52
AC055758.1-201ENST00000494509 ADGRD1Q6QNK2 874 aa11.78□□□□□ -0.52
AC055758.1-201ENST00000494509 PSDA5PKW4 1024 aaPredicted RBP11.75□□□□□ -0.53
AC055758.1-201ENST00000494509 CRISPLD2Q9H0B8 497 aa11.74□□□□□ -0.53
AC055758.1-201ENST00000494509 HRO43593 1189 aa11.73□□□□□ -0.53
AC055758.1-201ENST00000494509 OXER1Q8TDS5 423 aa11.73□□□□□ -0.53
AC055758.1-201ENST00000494509 UPF1Q92900 1129 aaKnown RBP eCLIP11.73□□□□□ -0.53
AC055758.1-201ENST00000494509 NCKAP5LQ9HCH0 1330 aa11.72□□□□□ -0.53
AC055758.1-201ENST00000494509 PPP4R3BQ5MIZ7 849 aa11.7□□□□□ -0.54
AC055758.1-201ENST00000494509 CC2D2AQ9P2K1 1620 aa11.7□□□□□ -0.54
AC055758.1-201ENST00000494509 TBC1D12O60347 775 aa11.69□□□□□ -0.54
AC055758.1-201ENST00000494509 CECR2Q9BXF3 1484 aa11.69□□□□□ -0.54
AC055758.1-201ENST00000494509 TK2O00142 265 aa11.68□□□□□ -0.54
AC055758.1-201ENST00000494509 PPP1R15BQ5SWA1 713 aa11.68□□□□□ -0.54
AC055758.1-201ENST00000494509 GTPBP6O43824 516 aaPredicted RBP11.66□□□□□ -0.54
AC055758.1-201ENST00000494509 KCNK17Q96T54 332 aa11.66□□□□□ -0.54
AC055758.1-201ENST00000494509 ZNF454Q8N9F8 522 aa11.62□□□□□ -0.55
AC055758.1-201ENST00000494509 HCSTQ9UBK5 93 aa11.62□□□□□ -0.55
AC055758.1-201ENST00000494509 RYDENQ9NUL5 291 aaKnown RBP11.61□□□□□ -0.55
AC055758.1-201ENST00000494509 PLA2G2EQ9NZK7 142 aa11.61□□□□□ -0.55
AC055758.1-201ENST00000494509 KCTD12Q96CX2 325 aaKnown RBP11.59□□□□□ -0.55
AC055758.1-201ENST00000494509 VPS9D1Q9Y2B5 631 aa11.59□□□□□ -0.55
AC055758.1-201ENST00000494509 PDE4AP27815 886 aa11.58□□□□□ -0.56
AC055758.1-201ENST00000494509 FOSBP53539 338 aa11.58□□□□□ -0.56
AC055758.1-201ENST00000494509 LARP6Q9BRS8 491 aaKnown RBP11.57□□□□□ -0.56
AC055758.1-201ENST00000494509 BCL2L12Q9HB09 334 aa11.57□□□□□ -0.56
AC055758.1-201ENST00000494509 MYO15BQ96JP2 1530 aa11.56□□□□□ -0.56
AC055758.1-201ENST00000494509 EVI5O60447 810 aa11.55□□□□□ -0.56
AC055758.1-201ENST00000494509 ANO8Q9HCE9 1232 aaPredicted RBP11.55□□□□□ -0.56
AC055758.1-201ENST00000494509 SHROOM4Q9ULL8 1493 aa11.55□□□□□ -0.56
AC055758.1-201ENST00000494509 EIF4G1Q04637 1599 aaKnown RBP11.54□□□□□ -0.56
AC055758.1-201ENST00000494509 MFSD10Q14728 455 aa11.54□□□□□ -0.56
AC055758.1-201ENST00000494509 CADPS2Q86UW7 1296 aa11.54□□□□□ -0.56
AC055758.1-201ENST00000494509 DDX27Q96GQ7 796 aaKnown RBP11.53□□□□□ -0.56
AC055758.1-201ENST00000494509 EMILIN3Q9NT22 766 aa11.53□□□□□ -0.56
AC055758.1-201ENST00000494509 ADAM33Q9BZ11 813 aa11.52□□□□□ -0.57
AC055758.1-201ENST00000494509 JPH4Q96JJ6 628 aa11.51□□□□□ -0.57
AC055758.1-201ENST00000494509 BHMG1C9JSJ3 638 aaPredicted RBP11.5□□□□□ -0.57
AC055758.1-201ENST00000494509 KCNH8Q96L42 1107 aa11.5□□□□□ -0.57
AC055758.1-201ENST00000494509 ZBED2Q9BTP6 218 aa11.5□□□□□ -0.57
AC055758.1-201ENST00000494509 SLC4A5Q9BY07 1137 aa11.5□□□□□ -0.57
AC055758.1-201ENST00000494509 PTPREP23469 700 aa11.49□□□□□ -0.57
AC055758.1-201ENST00000494509 STAC3Q96MF2 364 aa11.48□□□□□ -0.57
AC055758.1-201ENST00000494509 PTPN5P54829 565 aa11.47□□□□□ -0.57
AC055758.1-201ENST00000494509 ZDHHC16Q969W1 377 aa11.46□□□□□ -0.57
AC055758.1-201ENST00000494509 MAP3K9P80192 1104 aa11.45□□□□□ -0.58
AC055758.1-201ENST00000494509 SCRIBQ14160 1630 aa11.44□□□□□ -0.58
AC055758.1-201ENST00000494509 PCDHGA10Q9Y5H3 936 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms