RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 MYO5CQ9NQX4 1742 aa31■■■□□ 2.55
KPNA1-210ENST00000494339 CAMSAP2Q08AD1 1489 aa31■■■□□ 2.55
KPNA1-210ENST00000494339 PTPRKQ15262 1439 aa30.95■■■□□ 2.55
KPNA1-210ENST00000494339 ARHGAP5Q13017 1502 aa30.94■■■□□ 2.54
KPNA1-210ENST00000494339 MAPKBP1O60336 1514 aa30.93■■■□□ 2.54
KPNA1-210ENST00000494339 ABCA9Q8IUA7 1624 aa30.92■■■□□ 2.54
KPNA1-210ENST00000494339 PLCH2O75038 1416 aa30.91■■■□□ 2.54
KPNA1-210ENST00000494339 HRCP23327 699 aa30.89■■■□□ 2.54
KPNA1-210ENST00000494339 DNMT1P26358 1616 aaKnown RBP30.89■■■□□ 2.54
KPNA1-210ENST00000494339 SAMD9LQ8IVG5 1584 aa30.88■■■□□ 2.53
KPNA1-210ENST00000494339 DAPK1P53355 1430 aa30.88■■■□□ 2.53
KPNA1-210ENST00000494339 ABCC5O15440 1437 aa30.85■■■□□ 2.53
KPNA1-210ENST00000494339 CHIC2Q9UKJ5 165 aa30.85■■■□□ 2.53
KPNA1-210ENST00000494339 EFCAB2Q5VUJ9 269 aa30.81■■■□□ 2.52
KPNA1-210ENST00000494339 ARAP3Q8WWN8 1544 aa30.8■■■□□ 2.52
KPNA1-210ENST00000494339 HNRNPMP52272 730 aaKnown RBP eCLIP30.8■■■□□ 2.52
KPNA1-210ENST00000494339 SETD5Q9C0A6 1442 aa30.79■■■□□ 2.52
KPNA1-210ENST00000494339 SYCP2Q9BX26 1530 aa30.77■■■□□ 2.52
KPNA1-210ENST00000494339 CROCC2H7BZ55 1655 aa30.76■■■□□ 2.52
KPNA1-210ENST00000494339 RAB3GAP2Q9H2M9 1393 aa30.76■■■□□ 2.51
KPNA1-210ENST00000494339 MBD5Q9P267 1494 aa30.75■■■□□ 2.51
KPNA1-210ENST00000494339 RRP7BPQ9NSQ0 103 aa30.75■■■□□ 2.51
KPNA1-210ENST00000494339 HFM1A2PYH4 1435 aa30.74■■■□□ 2.51
KPNA1-210ENST00000494339 CD109Q6YHK3 1445 aa30.74■■■□□ 2.51
KPNA1-210ENST00000494339 ARHGEF5Q12774 1597 aa30.73■■■□□ 2.51
KPNA1-210ENST00000494339 FANCAO15360 1455 aa30.73■■■□□ 2.51
KPNA1-210ENST00000494339 PLEKHH2Q8IVE3 1493 aa30.73■■■□□ 2.51
KPNA1-210ENST00000494339 CCER1Q8TC90 406 aaPredicted RBP30.73■■■□□ 2.51
KPNA1-210ENST00000494339 AKNAQ7Z591 1439 aa30.72■■■□□ 2.51
KPNA1-210ENST00000494339 NAIPQ13075 1403 aa30.7■■■□□ 2.51
KPNA1-210ENST00000494339 KIAA1107Q9UPP5 1409 aa30.7■■■□□ 2.51
KPNA1-210ENST00000494339 ABCC1P33527 1531 aa30.69■■■□□ 2.5
KPNA1-210ENST00000494339 CCDC141Q6ZP82 1450 aa30.69■■■□□ 2.5
KPNA1-210ENST00000494339 ARHGEF12Q9NZN5 1544 aa30.68■■■□□ 2.5
KPNA1-210ENST00000494339 ROCK1Q13464 1354 aa30.68■■■□□ 2.5
KPNA1-210ENST00000494339 DIP2BQ9P265 1576 aa30.67■■■□□ 2.5
KPNA1-210ENST00000494339 ADGBQ8N7X0 1667 aa30.66■■■□□ 2.5
KPNA1-210ENST00000494339 RSPH4AQ5TD94 716 aa30.66■■■□□ 2.5
KPNA1-210ENST00000494339 SHANK2Q9UPX8 1470 aa30.66■■■□□ 2.5
KPNA1-210ENST00000494339 GLI2P10070 1586 aa30.66■■■□□ 2.5
KPNA1-210ENST00000494339 GCC2Q8IWJ2 1684 aa30.66■■■□□ 2.5
KPNA1-210ENST00000494339 TSPY4P0CV99 314 aa30.65■■■□□ 2.5
KPNA1-210ENST00000494339 TSPY10P0CW01 314 aa30.65■■■□□ 2.5
KPNA1-210ENST00000494339 C9orf84Q5VXU9 1444 aa30.65■■■□□ 2.5
KPNA1-210ENST00000494339 FAM69CQ0P6D2 419 aa30.65■■■□□ 2.5
KPNA1-210ENST00000494339 MAP3K4Q9Y6R4 1608 aa30.64■■■□□ 2.5
KPNA1-210ENST00000494339 NCOA1Q15788 1441 aa30.61■■■□□ 2.49
KPNA1-210ENST00000494339 ADGRL2O95490 1459 aa30.61■■■□□ 2.49
KPNA1-210ENST00000494339 ADGRL1O94910 1474 aa30.6■■■□□ 2.49
KPNA1-210ENST00000494339 ZEB1P37275 1124 aaPredicted RBP30.59■■■□□ 2.49
KPNA1-210ENST00000494339 TRAPPC8Q9Y2L5 1435 aa30.59■■■□□ 2.49
KPNA1-210ENST00000494339 ANKRD30AQ9BXX3 1397 aa30.59■■■□□ 2.49
KPNA1-210ENST00000494339 CFAP74Q9C0B2 1584 aa30.58■■■□□ 2.49
KPNA1-210ENST00000494339 SCAPERQ9BY12 1400 aa30.56■■■□□ 2.48
KPNA1-210ENST00000494339 KDM6BO15054 1643 aa30.55■■■□□ 2.48
KPNA1-210ENST00000494339 DHX57Q6P158 1386 aaKnown RBP30.55■■■□□ 2.48
KPNA1-210ENST00000494339 AFAP1Q8N556 730 aa30.53■■■□□ 2.48
KPNA1-210ENST00000494339 MAST1Q9Y2H9 1570 aa30.52■■■□□ 2.48
KPNA1-210ENST00000494339 KIF13AQ9H1H9 1805 aa30.52■■■□□ 2.48
KPNA1-210ENST00000494339 TSPOAP1O95153 1857 aa30.51■■■□□ 2.48
KPNA1-210ENST00000494339 NEO1Q92859 1461 aa30.49■■■□□ 2.47
KPNA1-210ENST00000494339 KIF15Q9NS87 1388 aa30.47■■■□□ 2.47
KPNA1-210ENST00000494339 SPAG9O60271 1321 aaKnown RBP30.45■■■□□ 2.46
KPNA1-210ENST00000494339 PPRC1Q5VV67 1664 aaKnown RBP30.43■■■□□ 2.46
KPNA1-210ENST00000494339 ANKRD50Q9ULJ7 1429 aa30.43■■■□□ 2.46
KPNA1-210ENST00000494339 PLXNC1O60486 1568 aa30.42■■■□□ 2.46
KPNA1-210ENST00000494339 TRHP20396 242 aaPredicted RBP30.4■■■□□ 2.46
KPNA1-210ENST00000494339 ZNF518AQ6AHZ1 1483 aa30.4■■■□□ 2.46
KPNA1-210ENST00000494339 ZFYVE16Q7Z3T8 1539 aa30.4■■■□□ 2.46
KPNA1-210ENST00000494339 TRIM52Q96A61 297 aa30.39■■■□□ 2.46
KPNA1-210ENST00000494339 POGZQ7Z3K3 1410 aa30.39■■■□□ 2.46
KPNA1-210ENST00000494339 RTEL1-TNFRSF6BF6WH68 1400 aa30.38■■■□□ 2.45
KPNA1-210ENST00000494339 INO80Q9ULG1 1556 aaPredicted RBP30.36■■■□□ 2.45
KPNA1-210ENST00000494339 MYT1LQ9UL68 1186 aa30.36■■■□□ 2.45
KPNA1-210ENST00000494339 TEX14Q8IWB6 1497 aa30.36■■■□□ 2.45
KPNA1-210ENST00000494339 ATP7AQ04656 1500 aa30.36■■■□□ 2.45
KPNA1-210ENST00000494339 DENND4BO75064 1496 aaPredicted RBP30.34■■■□□ 2.45
KPNA1-210ENST00000494339 RAPGEF3O95398 923 aa30.33■■■□□ 2.45
KPNA1-210ENST00000494339 KDM5CP41229 1560 aa30.32■■■□□ 2.44
KPNA1-210ENST00000494339 DUOX2Q9NRD8 1548 aa30.31■■■□□ 2.44
KPNA1-210ENST00000494339 CLSPNQ9HAW4 1339 aa30.3■■■□□ 2.44
KPNA1-210ENST00000494339 KIDINS220Q9ULH0 1771 aa30.29■■■□□ 2.44
KPNA1-210ENST00000494339 ACIN1Q9UKV3 1341 aaKnown RBP30.29■■■□□ 2.44
KPNA1-210ENST00000494339 RICTORQ6R327 1708 aa30.28■■■□□ 2.44
KPNA1-210ENST00000494339 HECW2Q9P2P5 1572 aa30.25■■■□□ 2.43
KPNA1-210ENST00000494339 ERBINQ96RT1 1412 aa30.24■■■□□ 2.43
KPNA1-210ENST00000494339 MLH3Q9UHC1 1453 aa30.24■■■□□ 2.43
KPNA1-210ENST00000494339 MPHOSPH9Q99550 1183 aa30.23■■■□□ 2.43
KPNA1-210ENST00000494339 FRMPD1Q5SYB0 1578 aa30.21■■■□□ 2.43
KPNA1-210ENST00000494339 NUP155O75694 1391 aa30.18■■■□□ 2.42
KPNA1-210ENST00000494339 PZPP20742 1482 aa30.18■■■□□ 2.42
KPNA1-210ENST00000494339 SLC4A1APQ9BWU0 796 aaKnown RBP30.18■■■□□ 2.42
KPNA1-210ENST00000494339 ABCA6Q8N139 1617 aa30.15■■■□□ 2.42
KPNA1-210ENST00000494339 UNC13BO14795 1591 aa30.14■■■□□ 2.42
KPNA1-210ENST00000494339 DHX29Q7Z478 1369 aaKnown RBP30.14■■■□□ 2.42
KPNA1-210ENST00000494339 KDM5DQ9BY66 1539 aa30.12■■■□□ 2.41
KPNA1-210ENST00000494339 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.12■■■□□ 2.412e-8■■■□□ 18.6
KPNA1-210ENST00000494339 FOXD1Q16676 465 aa30.11■■■□□ 2.41
KPNA1-210ENST00000494339 A2MP01023 1474 aa30.11■■■□□ 2.41
KPNA1-210ENST00000494339 COL17A1Q9UMD9 1497 aaPredicted RBP30.11■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms