RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 VPS8Q8N3P4 1428 aa34.78■■■■□ 3.16
HPS3-207ENST00000494327 RICTORQ6R327 1708 aa34.78■■■■□ 3.16
HPS3-207ENST00000494327 POGZQ7Z3K3 1410 aa34.73■■■■□ 3.15
HPS3-207ENST00000494327 CDC42BPBQ9Y5S2 1711 aa34.73■■■■□ 3.15
HPS3-207ENST00000494327 ZNF777Q9ULD5 760 aaPredicted RBP34.72■■■■□ 3.15
HPS3-207ENST00000494327 PREX2Q70Z35 1606 aa34.72■■■■□ 3.15
HPS3-207ENST00000494327 ARID4BQ4LE39 1312 aaPredicted RBP34.7■■■■□ 3.15
HPS3-207ENST00000494327 CCNB3Q8WWL7 1395 aa34.69■■■■□ 3.14
HPS3-207ENST00000494327 AFAP1Q8N556 730 aa34.68■■■■□ 3.14
HPS3-207ENST00000494327 GPATCH8Q9UKJ3 1502 aaKnown RBP34.67■■■■□ 3.14
HPS3-207ENST00000494327 CDC42BPAQ5VT25 1732 aa34.67■■■■□ 3.14
HPS3-207ENST00000494327 EHBP1L1Q8N3D4 1523 aa34.66■■■■□ 3.14
HPS3-207ENST00000494327 ZMYM4Q5VZL5 1548 aa34.65■■■■□ 3.14
HPS3-207ENST00000494327 YEATS2Q9ULM3 1422 aa34.65■■■■□ 3.14
HPS3-207ENST00000494327 CFDP1Q9UEE9 299 aaPredicted RBP34.65■■■■□ 3.14
HPS3-207ENST00000494327 MYT1LQ9UL68 1186 aa34.65■■■■□ 3.14
HPS3-207ENST00000494327 ZFYVE16Q7Z3T8 1539 aa34.63■■■■□ 3.13
HPS3-207ENST00000494327 ARHGEF40Q8TER5 1519 aa34.63■■■■□ 3.13
HPS3-207ENST00000494327 MAGI2Q86UL8 1455 aa34.62■■■■□ 3.13
HPS3-207ENST00000494327 ZNF518AQ6AHZ1 1483 aa34.61■■■■□ 3.13
HPS3-207ENST00000494327 TIAM1Q13009 1591 aa34.6■■■■□ 3.13
HPS3-207ENST00000494327 ARHGEF12Q9NZN5 1544 aa34.58■■■■□ 3.13
HPS3-207ENST00000494327 ABCC1P33527 1531 aa34.57■■■■□ 3.12
HPS3-207ENST00000494327 TRAPPC8Q9Y2L5 1435 aa34.56■■■■□ 3.12
HPS3-207ENST00000494327 HNRNPMP52272 730 aaKnown RBP eCLIP34.54■■■■□ 3.12
HPS3-207ENST00000494327 SAMD9LQ8IVG5 1584 aa34.52■■■■□ 3.12
HPS3-207ENST00000494327 KDM5CP41229 1560 aa34.5■■■■□ 3.11
HPS3-207ENST00000494327 APLP2Q06481 763 aa34.5■■■■□ 3.11
HPS3-207ENST00000494327 KANK4Q5T7N3 995 aaPredicted RBP34.5■■■■□ 3.11
HPS3-207ENST00000494327 NCOA2Q15596 1464 aa34.5■■■■□ 3.11
HPS3-207ENST00000494327 LRRC9Q6ZRR7 1453 aa34.49■■■■□ 3.11
HPS3-207ENST00000494327 ITSN2Q9NZM3 1697 aa34.49■■■■□ 3.11
HPS3-207ENST00000494327 ATP10AO60312 1499 aa34.48■■■■□ 3.11
HPS3-207ENST00000494327 SUPT6HQ7KZ85 1726 aaKnown RBP34.47■■■■□ 3.11
HPS3-207ENST00000494327 ZNF644Q9H582 1327 aaPredicted RBP34.47■■■■□ 3.11
HPS3-207ENST00000494327 SYCP2Q9BX26 1530 aa34.46■■■■□ 3.11
HPS3-207ENST00000494327 MLECQ14165 292 aa34.46■■■■□ 3.11
HPS3-207ENST00000494327 MAP3K1Q13233 1512 aa34.44■■■■□ 3.1
HPS3-207ENST00000494327 HECW2Q9P2P5 1572 aa34.44■■■■□ 3.1
HPS3-207ENST00000494327 C9orf84Q5VXU9 1444 aa34.43■■■■□ 3.1
HPS3-207ENST00000494327 PLEKHH2Q8IVE3 1493 aa34.43■■■■□ 3.1
HPS3-207ENST00000494327 BCORL1Q5H9F3 1711 aa34.43■■■■□ 3.1
HPS3-207ENST00000494327 MLH3Q9UHC1 1453 aa34.42■■■■□ 3.1
HPS3-207ENST00000494327 KIAA1107Q9UPP5 1409 aa34.42■■■■□ 3.1
HPS3-207ENST00000494327 ADAMTSL3P82987 1691 aa34.41■■■■□ 3.1
HPS3-207ENST00000494327 SIGLEC1Q9BZZ2 1709 aa34.39■■■■□ 3.1
HPS3-207ENST00000494327 SPAG9O60271 1321 aaKnown RBP34.38■■■■□ 3.09
HPS3-207ENST00000494327 DIP2CQ9Y2E4 1556 aa34.35■■■■□ 3.09
HPS3-207ENST00000494327 MADDQ8WXG6 1647 aa34.33■■■■□ 3.09
HPS3-207ENST00000494327 ABCA6Q8N139 1617 aa34.32■■■■□ 3.08
HPS3-207ENST00000494327 PTPRMP28827 1452 aa34.32■■■■□ 3.08
HPS3-207ENST00000494327 KIDINS220Q9ULH0 1771 aa34.29■■■■□ 3.08
HPS3-207ENST00000494327 PLPPR3Q6T4P5 718 aa34.29■■■■□ 3.08
HPS3-207ENST00000494327 MBD5Q9P267 1494 aa34.27■■■■□ 3.08
HPS3-207ENST00000494327 CAMSAP2Q08AD1 1489 aa34.26■■■■□ 3.07
HPS3-207ENST00000494327 RIMS1Q86UR5 1692 aaKnown RBP34.23■■■■□ 3.07
HPS3-207ENST00000494327 ATP7AQ04656 1500 aa34.22■■■■□ 3.07
HPS3-207ENST00000494327 REREQ9P2R6 1566 aa34.21■■■■□ 3.07
HPS3-207ENST00000494327 MYOM3Q5VTT5 1437 aa34.2■■■■□ 3.06
HPS3-207ENST00000494327 RSPH4AQ5TD94 716 aa34.18■■■■□ 3.06
HPS3-207ENST00000494327 INO80Q9ULG1 1556 aaPredicted RBP34.16■■■■□ 3.06
HPS3-207ENST00000494327 CCDC141Q6ZP82 1450 aa34.15■■■■□ 3.06
HPS3-207ENST00000494327 AGLP35573 1532 aa34.14■■■■□ 3.06
HPS3-207ENST00000494327 FER1L4A9Z1Z3 1794 aa34.13■■■■□ 3.05
HPS3-207ENST00000494327 MIA2Q96PC5 1412 aa34.13■■■■□ 3.05
HPS3-207ENST00000494327 TSPY4P0CV99 314 aa34.11■■■■□ 3.05
HPS3-207ENST00000494327 TSPY10P0CW01 314 aa34.11■■■■□ 3.05
HPS3-207ENST00000494327 ESF1Q9H501 851 aaKnown RBP34.11■■■■□ 3.05
HPS3-207ENST00000494327 A2MP01023 1474 aa34.11■■■■□ 3.05
HPS3-207ENST00000494327 RTEL1-TNFRSF6BF6WH68 1400 aa34.1■■■■□ 3.05
HPS3-207ENST00000494327 CEBPAP49715 358 aaPredicted RBP34.07■■■■□ 3.04
HPS3-207ENST00000494327 ARHGEF5Q12774 1597 aa34.05■■■■□ 3.04
HPS3-207ENST00000494327 GGT6Q6P531 493 aa34.01■■■■□ 3.03
HPS3-207ENST00000494327 PLXNC1O60486 1568 aa33.99■■■■□ 3.03
HPS3-207ENST00000494327 ADGBQ8N7X0 1667 aa33.99■■■■□ 3.03
HPS3-207ENST00000494327 DHX29Q7Z478 1369 aaKnown RBP33.98■■■■□ 3.03
HPS3-207ENST00000494327 FGD6Q6ZV73 1430 aa33.96■■■■□ 3.03
HPS3-207ENST00000494327 PTPN23Q9H3S7 1636 aa33.95■■■■□ 3.03
HPS3-207ENST00000494327 PPARGC1BQ86YN6 1023 aaKnown RBP33.93■■■■□ 3.02
HPS3-207ENST00000494327 KIF3BO15066 747 aa33.92■■■■□ 3.02
HPS3-207ENST00000494327 CNTLNQ9NXG0 1405 aa33.9■■■■□ 3.02
HPS3-207ENST00000494327 LMTK3Q96Q04 1460 aa33.88■■■■□ 3.01
HPS3-207ENST00000494327 MAST1Q9Y2H9 1570 aa33.86■■■■□ 3.01
HPS3-207ENST00000494327 FAM50AQ14320 339 aaKnown RBP33.86■■■■□ 3.01
HPS3-207ENST00000494327 TCOF1Q13428 1488 aaKnown RBP33.86■■■■□ 3.01
HPS3-207ENST00000494327 ABCC5O15440 1437 aa33.86■■■■□ 3.01
HPS3-207ENST00000494327 HSPA2P54652 639 aa33.84■■■■□ 3.01
HPS3-207ENST00000494327 ZMYM3Q14202 1370 aa33.84■■■■□ 3.01
HPS3-207ENST00000494327 PPP6R1Q9UPN7 881 aa33.82■■■■□ 3
HPS3-207ENST00000494327 C3P01024 1663 aa33.82■■■■□ 3
HPS3-207ENST00000494327 DAPK1P53355 1430 aa33.81■■■■□ 3
HPS3-207ENST00000494327 CHIC2Q9UKJ5 165 aa33.8■■■■□ 3
HPS3-207ENST00000494327 RRP7BPQ9NSQ0 103 aa33.79■■■■□ 3
HPS3-207ENST00000494327 CLTCQ00610 1675 aaKnown RBP33.77■■■■□ 3
HPS3-207ENST00000494327 SHANK2Q9UPX8 1470 aa33.76■■■□□ 2.99
HPS3-207ENST00000494327 DNMT1P26358 1616 aaKnown RBP33.75■■■□□ 2.99
HPS3-207ENST00000494327 MROH2AA6NES4 1674 aa33.73■■■□□ 2.99
HPS3-207ENST00000494327 WASHC2CQ9Y4E1 1318 aa33.73■■■□□ 2.99
HPS3-207ENST00000494327 KIF15Q9NS87 1388 aa33.72■■■□□ 2.99
HPS3-207ENST00000494327 UHRF1BP1Q6BDS2 1440 aa33.72■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms