RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 POTEEQ6S8J3 1075 aa8.86□□□□□ -0.99
PTPN12-212ENST00000494248 CABP2Q9NPB3 220 aa8.83□□□□□ -1
PTPN12-212ENST00000494248 PDAP1Q13442 181 aaKnown RBP8.82□□□□□ -1
PTPN12-212ENST00000494248 TRAF7Q6Q0C0 670 aa8.82□□□□□ -1
PTPN12-212ENST00000494248 ADGRD1Q6QNK2 874 aa8.81□□□□□ -1
PTPN12-212ENST00000494248 KLHL34Q8N239 644 aa8.8□□□□□ -1
PTPN12-212ENST00000494248 ARSIQ5FYB1 569 aa8.79□□□□□ -1
PTPN12-212ENST00000494248 TMEM92Q6UXU6 159 aa8.79□□□□□ -1
PTPN12-212ENST00000494248 AXIN2Q9Y2T1 843 aa8.79□□□□□ -1
PTPN12-212ENST00000494248 KCTD12Q96CX2 325 aaKnown RBP8.78□□□□□ -1
PTPN12-212ENST00000494248 VASPP50552 380 aaPredicted RBP8.77□□□□□ -1.01
PTPN12-212ENST00000494248 ZNF775Q96BV0 537 aaPredicted RBP8.77□□□□□ -1.01
PTPN12-212ENST00000494248 FBXO3Q9UK99 471 aa8.76□□□□□ -1.01
PTPN12-212ENST00000494248 LAPTM4AQ15012 233 aa8.75□□□□□ -1.01
PTPN12-212ENST00000494248 KHSRPQ92945 711 aaKnown RBP eCLIP8.72□□□□□ -1.011e-7■■■□□ 17.3
PTPN12-212ENST00000494248 HRO43593 1189 aa8.71□□□□□ -1.02
PTPN12-212ENST00000494248 EFCAB3Q8N7B9 438 aa8.7□□□□□ -1.02
PTPN12-212ENST00000494248 ZNF787Q6DD87 383 aa8.69□□□□□ -1.02
PTPN12-212ENST00000494248 MICALL2Q8IY33 904 aa8.68□□□□□ -1.02
PTPN12-212ENST00000494248 PTPN5P54829 565 aa8.65□□□□□ -1.02
PTPN12-212ENST00000494248 IFNLR1Q8IU57 520 aaPredicted RBP8.65□□□□□ -1.02
PTPN12-212ENST00000494248 CIZ1Q9ULV3 898 aaPredicted RBP8.65□□□□□ -1.02
PTPN12-212ENST00000494248 TK2O00142 265 aa8.64□□□□□ -1.03
PTPN12-212ENST00000494248 MS4A4AQ96JQ5 239 aa8.64□□□□□ -1.03
PTPN12-212ENST00000494248 SPOCK2Q92563 424 aa8.61□□□□□ -1.03
PTPN12-212ENST00000494248 ARHGAP33O14559 1287 aa8.6□□□□□ -1.03
PTPN12-212ENST00000494248 GFRA3O60609 400 aa8.58□□□□□ -1.04
PTPN12-212ENST00000494248 LHX6Q9UPM6 363 aa8.55□□□□□ -1.04
PTPN12-212ENST00000494248 PHF8Q9UPP1 1060 aa8.55□□□□□ -1.04
PTPN12-212ENST00000494248 NUDT7P0C024 238 aa8.53□□□□□ -1.04
PTPN12-212ENST00000494248 SOX12O15370 315 aa8.52□□□□□ -1.05
PTPN12-212ENST00000494248 DMRTA1Q5VZB9 504 aa8.52□□□□□ -1.05
PTPN12-212ENST00000494248 STAC3Q96MF2 364 aa8.52□□□□□ -1.05
PTPN12-212ENST00000494248 RNF25Q96BH1 459 aaPredicted RBP8.51□□□□□ -1.05
PTPN12-212ENST00000494248 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.48□□□□□ -1.05
PTPN12-212ENST00000494248 NRG2O14511 850 aaPredicted RBP8.48□□□□□ -1.05
PTPN12-212ENST00000494248 ZFP91Q96JP5 570 aaPredicted RBP8.48□□□□□ -1.05
PTPN12-212ENST00000494248 THSD4Q6ZMP0 1018 aa8.47□□□□□ -1.05
PTPN12-212ENST00000494248 KIF3CO14782 793 aa8.46□□□□□ -1.06
PTPN12-212ENST00000494248 FBXO22Q8NEZ5 403 aa8.45□□□□□ -1.06
PTPN12-212ENST00000494248 ITGBL1O95965 494 aaPredicted RBP8.44□□□□□ -1.06
PTPN12-212ENST00000494248 PSEN2P49810 448 aa8.44□□□□□ -1.06
PTPN12-212ENST00000494248 LCE2AQ5TA79 106 aaPredicted RBP8.43□□□□□ -1.06
PTPN12-212ENST00000494248 STK17AQ9UEE5 414 aa8.43□□□□□ -1.06
PTPN12-212ENST00000494248 C2orf72A6NCS6 295 aa8.42□□□□□ -1.06
PTPN12-212ENST00000494248 RIOK3O14730 519 aaKnown RBP8.42□□□□□ -1.06
PTPN12-212ENST00000494248 TRIM41Q8WV44 630 aa8.42□□□□□ -1.06
PTPN12-212ENST00000494248 PCDHGA4Q9Y5G9 962 aa8.4□□□□□ -1.06
PTPN12-212ENST00000494248 TREML4Q6UXN2 200 aa8.38□□□□□ -1.07
PTPN12-212ENST00000494248 VGFO15240 615 aaPredicted RBP8.37□□□□□ -1.07
PTPN12-212ENST00000494248 SUZ12Q15022 739 aaKnown RBP8.37□□□□□ -1.07
PTPN12-212ENST00000494248 PSDA5PKW4 1024 aaPredicted RBP8.36□□□□□ -1.07
PTPN12-212ENST00000494248 SLC34A2O95436 690 aa8.36□□□□□ -1.07
PTPN12-212ENST00000494248 NLRP6P59044 892 aa8.36□□□□□ -1.07
PTPN12-212ENST00000494248 MFRPQ9BY79 579 aa8.36□□□□□ -1.07
PTPN12-212ENST00000494248 KDM4FA0A1W2PPD8 638 aa8.35□□□□□ -1.07
PTPN12-212ENST00000494248 BCL11BQ9C0K0 894 aaPredicted RBP8.32□□□□□ -1.08
PTPN12-212ENST00000494248 VPS9D1Q9Y2B5 631 aa8.3□□□□□ -1.08
PTPN12-212ENST00000494248 WNT2BQ93097 391 aa8.29□□□□□ -1.08
PTPN12-212ENST00000494248 STK24Q9Y6E0 443 aa8.26□□□□□ -1.09
PTPN12-212ENST00000494248 PPP1R37O75864 691 aa8.23□□□□□ -1.09
PTPN12-212ENST00000494248 GOLGA8CPA6NN73 597 aa8.22□□□□□ -1.09
PTPN12-212ENST00000494248 TMC2Q8TDI7 906 aa8.22□□□□□ -1.09
PTPN12-212ENST00000494248 PTCD2Q8WV60 388 aaKnown RBP8.22□□□□□ -1.09
PTPN12-212ENST00000494248 POTECB2RU33 542 aa8.21□□□□□ -1.1
PTPN12-212ENST00000494248 BHMG1C9JSJ3 638 aaPredicted RBP8.21□□□□□ -1.1
PTPN12-212ENST00000494248 KCNK17Q96T54 332 aa8.2□□□□□ -1.1
PTPN12-212ENST00000494248 KCNC4Q03721 635 aa8.19□□□□□ -1.1
PTPN12-212ENST00000494248 PRKD2Q9BZL6 878 aa8.19□□□□□ -1.1
PTPN12-212ENST00000494248 INSM1Q01101 510 aaPredicted RBP8.18□□□□□ -1.1
PTPN12-212ENST00000494248 STK25O00506 426 aa8.17□□□□□ -1.1
PTPN12-212ENST00000494248 PPP4R3BQ5MIZ7 849 aa8.17□□□□□ -1.1
PTPN12-212ENST00000494248 KCNH8Q96L42 1107 aa8.17□□□□□ -1.1
PTPN12-212ENST00000494248 SLC4A5Q9BY07 1137 aa8.16□□□□□ -1.1
PTPN12-212ENST00000494248 PDZRN3Q9UPQ7 1066 aa8.16□□□□□ -1.1
PTPN12-212ENST00000494248 WIPF1O43516 503 aa8.14□□□□□ -1.11
PTPN12-212ENST00000494248 MRPL50Q8N5N7 158 aaKnown RBP8.14□□□□□ -1.11
PTPN12-212ENST00000494248 PLPP6Q8IY26 295 aa8.13□□□□□ -1.11
PTPN12-212ENST00000494248 FOXK1P85037 733 aa8.12□□□□□ -1.11
PTPN12-212ENST00000494248 V9GY48 417 aaPredicted RBP8.11□□□□□ -1.11
PTPN12-212ENST00000494248 WFS1O76024 890 aa8.1□□□□□ -1.11
PTPN12-212ENST00000494248 DSG2Q14126 1118 aa8.1□□□□□ -1.11
PTPN12-212ENST00000494248 TAOK2Q9UL54 1235 aa8.08□□□□□ -1.12
PTPN12-212ENST00000494248 GPHNQ9NQX3 736 aaPredicted RBP8.07□□□□□ -1.12
PTPN12-212ENST00000494248 MYT1Q01538 1121 aa8.06□□□□□ -1.12
PTPN12-212ENST00000494248 NYAP1Q6ZVC0 841 aa8.06□□□□□ -1.12
PTPN12-212ENST00000494248 RGL2O15211 777 aa8.05□□□□□ -1.12
PTPN12-212ENST00000494248 ZBED2Q9BTP6 218 aa8.05□□□□□ -1.12
PTPN12-212ENST00000494248 KRTAP4-8Q9BYQ9 185 aa8.05□□□□□ -1.12
PTPN12-212ENST00000494248 BCL2L12Q9HB09 334 aa8.05□□□□□ -1.12
PTPN12-212ENST00000494248 ZNF454Q8N9F8 522 aa8.04□□□□□ -1.12
PTPN12-212ENST00000494248 OXER1Q8TDS5 423 aa8.04□□□□□ -1.12
PTPN12-212ENST00000494248 TBC1D12O60347 775 aa8.02□□□□□ -1.13
PTPN12-212ENST00000494248 ECM2O94769 699 aaPredicted RBP8.01□□□□□ -1.13
PTPN12-212ENST00000494248 UPF1Q92900 1129 aaKnown RBP eCLIP8.01□□□□□ -1.13
PTPN12-212ENST00000494248 NBPF3Q9H094 633 aa8.01□□□□□ -1.13
PTPN12-212ENST00000494248 FOSBP53539 338 aa8□□□□□ -1.13
PTPN12-212ENST00000494248 ANKK1Q8NFD2 765 aa8□□□□□ -1.13
PTPN12-212ENST00000494248 BCAMP50895 628 aa7.98□□□□□ -1.13
PTPN12-212ENST00000494248 NFX1Q12986 1120 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms