RNA–Protein interactions for RNA: ENST00000494245.1

STX1A-212, Transcript of syntaxin 1A, humanhuman

TSL 4

Gene STX1A, Length 565 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX1A-212ENST00000494245 ARHGAP5Q13017 1502 aa33.02■■■□□ 2.88
STX1A-212ENST00000494245 PPARGC1BQ86YN6 1023 aaKnown RBP33■■■□□ 2.87
STX1A-212ENST00000494245 MYOM3Q5VTT5 1437 aa33■■■□□ 2.87
STX1A-212ENST00000494245 FANCAO15360 1455 aa32.97■■■□□ 2.87
STX1A-212ENST00000494245 NEO1Q92859 1461 aa32.97■■■□□ 2.87
STX1A-212ENST00000494245 PHLDB1Q86UU1 1377 aa32.96■■■□□ 2.87
STX1A-212ENST00000494245 EFCAB2Q5VUJ9 269 aa32.94■■■□□ 2.86
STX1A-212ENST00000494245 MIA2Q96PC5 1412 aa32.94■■■□□ 2.86
STX1A-212ENST00000494245 CFDP1Q9UEE9 299 aaPredicted RBP32.93■■■□□ 2.86
STX1A-212ENST00000494245 FGD6Q6ZV73 1430 aa32.87■■■□□ 2.85
STX1A-212ENST00000494245 SAMD9LQ8IVG5 1584 aa32.87■■■□□ 2.85
STX1A-212ENST00000494245 AKNAQ7Z591 1439 aa32.86■■■□□ 2.85
STX1A-212ENST00000494245 PLEKHH2Q8IVE3 1493 aa32.86■■■□□ 2.85
STX1A-212ENST00000494245 PTPN23Q9H3S7 1636 aa32.84■■■□□ 2.85
STX1A-212ENST00000494245 ABCC1P33527 1531 aa32.82■■■□□ 2.85
STX1A-212ENST00000494245 ADGRL1O94910 1474 aa32.81■■■□□ 2.84
STX1A-212ENST00000494245 CAMSAP2Q08AD1 1489 aa32.81■■■□□ 2.84
STX1A-212ENST00000494245 ZNF777Q9ULD5 760 aaPredicted RBP32.8■■■□□ 2.84
STX1A-212ENST00000494245 TCOF1Q13428 1488 aaKnown RBP32.79■■■□□ 2.84
STX1A-212ENST00000494245 KIAA1107Q9UPP5 1409 aa32.77■■■□□ 2.84
STX1A-212ENST00000494245 SYCP2Q9BX26 1530 aa32.74■■■□□ 2.83
STX1A-212ENST00000494245 KDM6BO15054 1643 aa32.73■■■□□ 2.83
STX1A-212ENST00000494245 SCAPERQ9BY12 1400 aa32.73■■■□□ 2.83
STX1A-212ENST00000494245 RRBP1Q9P2E9 1410 aaKnown RBP32.73■■■□□ 2.83
STX1A-212ENST00000494245 DENND4BO75064 1496 aaPredicted RBP32.72■■■□□ 2.83
STX1A-212ENST00000494245 RICTORQ6R327 1708 aa32.7■■■□□ 2.83
STX1A-212ENST00000494245 ZNF644Q9H582 1327 aaPredicted RBP32.7■■■□□ 2.82
STX1A-212ENST00000494245 ARHGEF5Q12774 1597 aa32.7■■■□□ 2.82
STX1A-212ENST00000494245 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.68■■■□□ 2.82
STX1A-212ENST00000494245 ARHGEF12Q9NZN5 1544 aa32.67■■■□□ 2.82
STX1A-212ENST00000494245 POGZQ7Z3K3 1410 aa32.67■■■□□ 2.82
STX1A-212ENST00000494245 ZNF518AQ6AHZ1 1483 aa32.66■■■□□ 2.82
STX1A-212ENST00000494245 MBD5Q9P267 1494 aa32.65■■■□□ 2.82
STX1A-212ENST00000494245 RSPH4AQ5TD94 716 aa32.64■■■□□ 2.82
STX1A-212ENST00000494245 DNMT1P26358 1616 aaKnown RBP32.63■■■□□ 2.81
STX1A-212ENST00000494245 FRMPD1Q5SYB0 1578 aa32.62■■■□□ 2.81
STX1A-212ENST00000494245 CCDC141Q6ZP82 1450 aa32.62■■■□□ 2.81
STX1A-212ENST00000494245 HNRNPMP52272 730 aaKnown RBP eCLIP32.62■■■□□ 2.81
STX1A-212ENST00000494245 FAM50AQ14320 339 aaKnown RBP32.62■■■□□ 2.81
STX1A-212ENST00000494245 COL17A1Q9UMD9 1497 aaPredicted RBP32.61■■■□□ 2.81
STX1A-212ENST00000494245 KDM5CP41229 1560 aa32.61■■■□□ 2.81
STX1A-212ENST00000494245 TRAPPC8Q9Y2L5 1435 aa32.6■■■□□ 2.81
STX1A-212ENST00000494245 CROCC2H7BZ55 1655 aa32.6■■■□□ 2.81
STX1A-212ENST00000494245 ZMYM4Q5VZL5 1548 aa32.57■■■□□ 2.8
STX1A-212ENST00000494245 RAPGEF3O95398 923 aa32.54■■■□□ 2.8
STX1A-212ENST00000494245 HECW2Q9P2P5 1572 aa32.53■■■□□ 2.8
STX1A-212ENST00000494245 DAPK1P53355 1430 aa32.53■■■□□ 2.8
STX1A-212ENST00000494245 SHANK2Q9UPX8 1470 aa32.52■■■□□ 2.8
STX1A-212ENST00000494245 MAST1Q9Y2H9 1570 aa32.52■■■□□ 2.8
STX1A-212ENST00000494245 AFAP1Q8N556 730 aa32.51■■■□□ 2.79
STX1A-212ENST00000494245 ABCC5O15440 1437 aa32.51■■■□□ 2.79
STX1A-212ENST00000494245 INO80Q9ULG1 1556 aaPredicted RBP32.49■■■□□ 2.79
STX1A-212ENST00000494245 MAGI2Q86UL8 1455 aa32.49■■■□□ 2.79
STX1A-212ENST00000494245 MLH3Q9UHC1 1453 aa32.48■■■□□ 2.79
STX1A-212ENST00000494245 TSPY4P0CV99 314 aa32.48■■■□□ 2.79
STX1A-212ENST00000494245 TSPY10P0CW01 314 aa32.48■■■□□ 2.79
STX1A-212ENST00000494245 SPAG9O60271 1321 aaKnown RBP32.47■■■□□ 2.79
STX1A-212ENST00000494245 RTEL1-TNFRSF6BF6WH68 1400 aa32.46■■■□□ 2.79
STX1A-212ENST00000494245 ADGBQ8N7X0 1667 aa32.46■■■□□ 2.79
STX1A-212ENST00000494245 ATP7AQ04656 1500 aa32.46■■■□□ 2.79
STX1A-212ENST00000494245 KIDINS220Q9ULH0 1771 aa32.45■■■□□ 2.79
STX1A-212ENST00000494245 ZFYVE16Q7Z3T8 1539 aa32.45■■■□□ 2.78
STX1A-212ENST00000494245 C9orf84Q5VXU9 1444 aa32.44■■■□□ 2.78
STX1A-212ENST00000494245 ARHGEF40Q8TER5 1519 aa32.4■■■□□ 2.78
STX1A-212ENST00000494245 PLXNC1O60486 1568 aa32.4■■■□□ 2.78
STX1A-212ENST00000494245 MYT1LQ9UL68 1186 aa32.39■■■□□ 2.78
STX1A-212ENST00000494245 ABCA6Q8N139 1617 aa32.37■■■□□ 2.77
STX1A-212ENST00000494245 ADGRL2O95490 1459 aa32.36■■■□□ 2.77
STX1A-212ENST00000494245 DIP2CQ9Y2E4 1556 aa32.35■■■□□ 2.77
STX1A-212ENST00000494245 ITGAEP38570 1179 aa32.34■■■□□ 2.77
STX1A-212ENST00000494245 PTPRKQ15262 1439 aa32.34■■■□□ 2.77
STX1A-212ENST00000494245 ANKRD30AQ9BXX3 1397 aa32.32■■■□□ 2.77
STX1A-212ENST00000494245 YEATS2Q9ULM3 1422 aa32.32■■■□□ 2.76
STX1A-212ENST00000494245 ROCK1Q13464 1354 aa32.31■■■□□ 2.76
STX1A-212ENST00000494245 TRIM26Q12899 539 aaPredicted RBP32.29■■■□□ 2.76
STX1A-212ENST00000494245 CHIC2Q9UKJ5 165 aa32.29■■■□□ 2.76
STX1A-212ENST00000494245 ATP10AO60312 1499 aa32.28■■■□□ 2.76
STX1A-212ENST00000494245 REREQ9P2R6 1566 aa32.28■■■□□ 2.76
STX1A-212ENST00000494245 NCOA1Q15788 1441 aa32.26■■■□□ 2.76
STX1A-212ENST00000494245 DUOX2Q9NRD8 1548 aa32.23■■■□□ 2.75
STX1A-212ENST00000494245 KIF15Q9NS87 1388 aa32.22■■■□□ 2.75
STX1A-212ENST00000494245 A2MP01023 1474 aa32.22■■■□□ 2.75
STX1A-212ENST00000494245 GCC2Q8IWJ2 1684 aa32.21■■■□□ 2.75
STX1A-212ENST00000494245 DHX29Q7Z478 1369 aaKnown RBP32.18■■■□□ 2.74
STX1A-212ENST00000494245 RRP7BPQ9NSQ0 103 aa32.17■■■□□ 2.74
STX1A-212ENST00000494245 EIF2AK4Q9P2K8 1649 aaKnown RBP32.16■■■□□ 2.74
STX1A-212ENST00000494245 ERBINQ96RT1 1412 aa32.15■■■□□ 2.74
STX1A-212ENST00000494245 HFM1A2PYH4 1435 aa32.14■■■□□ 2.74
STX1A-212ENST00000494245 AGLP35573 1532 aa32.14■■■□□ 2.74
STX1A-212ENST00000494245 BCORL1Q5H9F3 1711 aa32.14■■■□□ 2.74
STX1A-212ENST00000494245 NAIPQ13075 1403 aa32.09■■■□□ 2.73
STX1A-212ENST00000494245 SIGLEC1Q9BZZ2 1709 aa32.09■■■□□ 2.73
STX1A-212ENST00000494245 ANKRD50Q9ULJ7 1429 aa32.09■■■□□ 2.73
STX1A-212ENST00000494245 RNF17Q9BXT8 1623 aaKnown RBP32.02■■■□□ 2.72
STX1A-212ENST00000494245 SETD5Q9C0A6 1442 aa32■■■□□ 2.71
STX1A-212ENST00000494245 ARID4BQ4LE39 1312 aaPredicted RBP32■■■□□ 2.71
STX1A-212ENST00000494245 DEPDC5O75140 1603 aa31.98■■■□□ 2.71
STX1A-212ENST00000494245 KIF3BO15066 747 aa31.97■■■□□ 2.71
STX1A-212ENST00000494245 UNC13BO14795 1591 aa31.94■■■□□ 2.7
STX1A-212ENST00000494245 PRDM15P57071 1507 aaPredicted RBP31.92■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms