RNA–Protein interactions for RNA: ENST00000494243.5

TTC3-224, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-224ENST00000494243 ZFYVE16Q7Z3T8 1539 aa39.16■■■■□ 3.86
TTC3-224ENST00000494243 EFCAB2Q5VUJ9 269 aa39.16■■■■□ 3.86
TTC3-224ENST00000494243 POGZQ7Z3K3 1410 aa39.15■■■■□ 3.86
TTC3-224ENST00000494243 MYO5CQ9NQX4 1742 aa39.15■■■■□ 3.86
TTC3-224ENST00000494243 SIGLEC1Q9BZZ2 1709 aa39.11■■■■□ 3.85
TTC3-224ENST00000494243 ILDR1Q86SU0 546 aaPredicted RBP39.09■■■■□ 3.85
TTC3-224ENST00000494243 CASKIN1Q8WXD9 1431 aa39.08■■■■□ 3.85
TTC3-224ENST00000494243 CLIP1P30622 1438 aa39.07■■■■□ 3.85
TTC3-224ENST00000494243 PCF11O94913 1555 aaKnown RBP39.05■■■■□ 3.84
TTC3-224ENST00000494243 RIMS1Q86UR5 1692 aaKnown RBP39.03■■■■□ 3.84
TTC3-224ENST00000494243 ARHGAP5Q13017 1502 aa39■■■■□ 3.83
TTC3-224ENST00000494243 CCDC18Q5T9S5 1454 aa38.99■■■■□ 3.83
TTC3-224ENST00000494243 ATP10AO60312 1499 aa38.97■■■■□ 3.83
TTC3-224ENST00000494243 AFAP1Q8N556 730 aa38.94■■■■□ 3.82
TTC3-224ENST00000494243 CDC42BPBQ9Y5S2 1711 aa38.94■■■■□ 3.82
TTC3-224ENST00000494243 ZNF518AQ6AHZ1 1483 aa38.93■■■■□ 3.82
TTC3-224ENST00000494243 MLECQ14165 292 aa38.92■■■■□ 3.82
TTC3-224ENST00000494243 LMTK3Q96Q04 1460 aa38.92■■■■□ 3.82
TTC3-224ENST00000494243 FYCO1Q9BQS8 1478 aa38.9■■■■□ 3.82
TTC3-224ENST00000494243 KDM5CP41229 1560 aa38.9■■■■□ 3.82
TTC3-224ENST00000494243 C9orf84Q5VXU9 1444 aa38.89■■■■□ 3.82
TTC3-224ENST00000494243 PREX2Q70Z35 1606 aa38.85■■■■□ 3.81
TTC3-224ENST00000494243 PLPPR3Q6T4P5 718 aa38.82■■■■□ 3.8
TTC3-224ENST00000494243 ARHGEF12Q9NZN5 1544 aa38.82■■■■□ 3.8
TTC3-224ENST00000494243 FER1L4A9Z1Z3 1794 aa38.81■■■■□ 3.8
TTC3-224ENST00000494243 TRAPPC8Q9Y2L5 1435 aa38.78■■■■□ 3.8
TTC3-224ENST00000494243 ABCC1P33527 1531 aa38.78■■■■□ 3.8
TTC3-224ENST00000494243 CDC42BPAQ5VT25 1732 aa38.76■■■■□ 3.8
TTC3-224ENST00000494243 MLH3Q9UHC1 1453 aa38.76■■■■□ 3.8
TTC3-224ENST00000494243 DIP2CQ9Y2E4 1556 aa38.74■■■■□ 3.79
TTC3-224ENST00000494243 MYT1LQ9UL68 1186 aa38.73■■■■□ 3.79
TTC3-224ENST00000494243 HSPA2P54652 639 aa38.71■■■■□ 3.79
TTC3-224ENST00000494243 ITSN2Q9NZM3 1697 aa38.71■■■■□ 3.79
TTC3-224ENST00000494243 REREQ9P2R6 1566 aa38.7■■■■□ 3.79
TTC3-224ENST00000494243 ABCA6Q8N139 1617 aa38.68■■■■□ 3.78
TTC3-224ENST00000494243 GPATCH8Q9UKJ3 1502 aaKnown RBP38.66■■■■□ 3.78
TTC3-224ENST00000494243 CEBPAP49715 358 aaPredicted RBP38.63■■■■□ 3.77
TTC3-224ENST00000494243 ZNF777Q9ULD5 760 aaPredicted RBP38.61■■■■□ 3.77
TTC3-224ENST00000494243 SAMD9LQ8IVG5 1584 aa38.61■■■■□ 3.77
TTC3-224ENST00000494243 KIDINS220Q9ULH0 1771 aa38.59■■■■□ 3.77
TTC3-224ENST00000494243 AGLP35573 1532 aa38.58■■■■□ 3.77
TTC3-224ENST00000494243 SYCP2Q9BX26 1530 aa38.53■■■■□ 3.76
TTC3-224ENST00000494243 HNRNPMP52272 730 aaKnown RBP eCLIP38.52■■■■□ 3.763e-7■■■■□ 21.3
TTC3-224ENST00000494243 FBXO41Q8TF61 875 aa38.52■■■■□ 3.76
TTC3-224ENST00000494243 MTUS2Q5JR59 1369 aa38.51■■■■□ 3.76
TTC3-224ENST00000494243 CCNB3Q8WWL7 1395 aa38.5■■■■□ 3.75
TTC3-224ENST00000494243 CFDP1Q9UEE9 299 aaPredicted RBP38.5■■■■□ 3.75
TTC3-224ENST00000494243 PREX1Q8TCU6 1659 aa38.49■■■■□ 3.75
TTC3-224ENST00000494243 CEP162Q5TB80 1403 aa38.48■■■■□ 3.75
TTC3-224ENST00000494243 KIAA1107Q9UPP5 1409 aa38.47■■■■□ 3.75
TTC3-224ENST00000494243 SPAG9O60271 1321 aaKnown RBP38.45■■■■□ 3.75
TTC3-224ENST00000494243 PLEKHH2Q8IVE3 1493 aa38.43■■■■□ 3.74
TTC3-224ENST00000494243 C3P01024 1663 aa38.4■■■■□ 3.74
TTC3-224ENST00000494243 SETD1BQ9UPS6 1966 aaKnown RBP38.37■■■■□ 3.73
TTC3-224ENST00000494243 ESF1Q9H501 851 aaKnown RBP38.37■■■■□ 3.73
TTC3-224ENST00000494243 EHBP1L1Q8N3D4 1523 aa38.37■■■■□ 3.73
TTC3-224ENST00000494243 TIAM1Q13009 1591 aa38.36■■■■□ 3.73
TTC3-224ENST00000494243 ATP7AQ04656 1500 aa38.36■■■■□ 3.73
TTC3-224ENST00000494243 UHRF1BP1Q6BDS2 1440 aa38.36■■■■□ 3.73
TTC3-224ENST00000494243 ZNF644Q9H582 1327 aaPredicted RBP38.35■■■■□ 3.73
TTC3-224ENST00000494243 INO80Q9ULG1 1556 aaPredicted RBP38.34■■■■□ 3.73
TTC3-224ENST00000494243 CNTLNQ9NXG0 1405 aa38.32■■■■□ 3.73
TTC3-224ENST00000494243 SUPT6HQ7KZ85 1726 aaKnown RBP38.28■■■■□ 3.72
TTC3-224ENST00000494243 STRCQ7RTU9 1775 aa38.27■■■■□ 3.72
TTC3-224ENST00000494243 MBD5Q9P267 1494 aa38.27■■■■□ 3.72
TTC3-224ENST00000494243 PLXNC1O60486 1568 aa38.27■■■■□ 3.72
TTC3-224ENST00000494243 A2MP01023 1474 aa38.26■■■■□ 3.72
TTC3-224ENST00000494243 LOC105371045A0A1W2PR82 267 aa38.21■■■■□ 3.71
TTC3-224ENST00000494243 ZMYM3Q14202 1370 aa38.2■■■■□ 3.71
TTC3-224ENST00000494243 CERKQ8TCT0 537 aa38.2■■■■□ 3.71
TTC3-224ENST00000494243 MROH2AA6NES4 1674 aa38.2■■■■□ 3.71
TTC3-224ENST00000494243 DMRT2Q9Y5R5 561 aa38.18■■■■□ 3.7
TTC3-224ENST00000494243 NCOA2Q15596 1464 aa38.17■■■■□ 3.7
TTC3-224ENST00000494243 NPATQ14207 1427 aa38.15■■■■□ 3.7
TTC3-224ENST00000494243 RTEL1-TNFRSF6BF6WH68 1400 aa38.14■■■■□ 3.7
TTC3-224ENST00000494243 ADGBQ8N7X0 1667 aa38.14■■■■□ 3.7
TTC3-224ENST00000494243 GGT6Q6P531 493 aa38.12■■■■□ 3.69
TTC3-224ENST00000494243 CLTCQ00610 1675 aaKnown RBP38.11■■■■□ 3.69
TTC3-224ENST00000494243 VPS8Q8N3P4 1428 aa38.08■■■■□ 3.69
TTC3-224ENST00000494243 PTPRTO14522 1441 aa38.06■■■■□ 3.68
TTC3-224ENST00000494243 CAMSAP2Q08AD1 1489 aa38.06■■■■□ 3.68
TTC3-224ENST00000494243 PPP6R1Q9UPN7 881 aa38.05■■■■□ 3.68
TTC3-224ENST00000494243 DHX29Q7Z478 1369 aaKnown RBP38.04■■■■□ 3.68
TTC3-224ENST00000494243 CCDC141Q6ZP82 1450 aa38.03■■■■□ 3.68
TTC3-224ENST00000494243 PTPRKQ15262 1439 aa38.02■■■■□ 3.68
TTC3-224ENST00000494243 NCOA1Q15788 1441 aa38.02■■■■□ 3.68
TTC3-224ENST00000494243 RSPH4AQ5TD94 716 aa38.01■■■■□ 3.68
TTC3-224ENST00000494243 LRRC9Q6ZRR7 1453 aa38.01■■■■□ 3.67
TTC3-224ENST00000494243 CAMSAP1Q5T5Y3 1602 aa37.95■■■■□ 3.67
TTC3-224ENST00000494243 ARHGEF5Q12774 1597 aa37.93■■■■□ 3.66
TTC3-224ENST00000494243 KANK4Q5T7N3 995 aaPredicted RBP37.92■■■■□ 3.66
TTC3-224ENST00000494243 KIF3BO15066 747 aa37.91■■■■□ 3.66
TTC3-224ENST00000494243 MYO3AQ8NEV4 1616 aa37.9■■■■□ 3.66
TTC3-224ENST00000494243 MAP3K1Q13233 1512 aa37.9■■■■□ 3.66
TTC3-224ENST00000494243 ZNF142P52746 1687 aaPredicted RBP37.88■■■■□ 3.66
TTC3-224ENST00000494243 CEP170BQ9Y4F5 1589 aaPredicted RBP37.85■■■■□ 3.65
TTC3-224ENST00000494243 NCKAP5LQ9HCH0 1330 aa37.85■■■■□ 3.65
TTC3-224ENST00000494243 LTBP4Q8N2S1 1624 aa37.84■■■■□ 3.65
TTC3-224ENST00000494243 TSPY4P0CV99 314 aa37.84■■■■□ 3.65
TTC3-224ENST00000494243 TSPY10P0CW01 314 aa37.84■■■■□ 3.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms