RNA–Protein interactions for RNA: ENST00000494227.3

RN7SL538P-201, Transcript of RNA, 7SL, cytoplasmic 538, pseudogene, humanhuman

BASIC

Gene RN7SL538P, Length 304 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL538P-201ENST00000494227 NEO1Q92859 1461 aa14.03□□□□□ -0.16
RN7SL538P-201ENST00000494227 TTC37Q6PGP7 1564 aa14.03□□□□□ -0.16
RN7SL538P-201ENST00000494227 NCBP3Q53F19 620 aaKnown RBP13.99□□□□□ -0.17
RN7SL538P-201ENST00000494227 KANK4Q5T7N3 995 aaPredicted RBP13.99□□□□□ -0.17
RN7SL538P-201ENST00000494227 HOXD11P31277 338 aaPredicted RBP13.98□□□□□ -0.17
RN7SL538P-201ENST00000494227 ATP1B4Q9UN42 357 aaPredicted RBP13.98□□□□□ -0.17
RN7SL538P-201ENST00000494227 FER1L4A9Z1Z3 1794 aa13.98□□□□□ -0.17
RN7SL538P-201ENST00000494227 ZMYM4Q5VZL5 1548 aa13.97□□□□□ -0.17
RN7SL538P-201ENST00000494227 APLP2Q06481 763 aa13.97□□□□□ -0.17
RN7SL538P-201ENST00000494227 CASKIN1Q8WXD9 1431 aa13.96□□□□□ -0.18
RN7SL538P-201ENST00000494227 YEATS2Q9ULM3 1422 aa13.96□□□□□ -0.18
RN7SL538P-201ENST00000494227 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.95□□□□□ -0.18
RN7SL538P-201ENST00000494227 HSPA2P54652 639 aa13.95□□□□□ -0.18
RN7SL538P-201ENST00000494227 FMN1Q68DA7 1419 aa13.95□□□□□ -0.18
RN7SL538P-201ENST00000494227 CFAP74Q9C0B2 1584 aa13.94□□□□□ -0.18
RN7SL538P-201ENST00000494227 RNF216Q9NWF9 866 aaPredicted RBP13.94□□□□□ -0.18
RN7SL538P-201ENST00000494227 ZFYVE16Q7Z3T8 1539 aa13.94□□□□□ -0.18
RN7SL538P-201ENST00000494227 TRIM26Q12899 539 aaPredicted RBP13.93□□□□□ -0.18
RN7SL538P-201ENST00000494227 PCGF6Q9BYE7 350 aa13.93□□□□□ -0.18
RN7SL538P-201ENST00000494227 ARID4BQ4LE39 1312 aaPredicted RBP13.92□□□□□ -0.18
RN7SL538P-201ENST00000494227 HECW1Q76N89 1606 aa13.92□□□□□ -0.18
RN7SL538P-201ENST00000494227 PHLDB1Q86UU1 1377 aa13.92□□□□□ -0.18
RN7SL538P-201ENST00000494227 FANCAO15360 1455 aa13.92□□□□□ -0.18
RN7SL538P-201ENST00000494227 DENND4BO75064 1496 aaPredicted RBP13.92□□□□□ -0.18
RN7SL538P-201ENST00000494227 CDK13Q14004 1512 aaKnown RBP13.91□□□□□ -0.18
RN7SL538P-201ENST00000494227 AKNAQ7Z591 1439 aa13.9□□□□□ -0.19
RN7SL538P-201ENST00000494227 PREX1Q8TCU6 1659 aa13.88□□□□□ -0.19
RN7SL538P-201ENST00000494227 FYCO1Q9BQS8 1478 aa13.88□□□□□ -0.19
RN7SL538P-201ENST00000494227 POGZQ7Z3K3 1410 aa13.87□□□□□ -0.19
RN7SL538P-201ENST00000494227 STRCQ7RTU9 1775 aa13.86□□□□□ -0.19
RN7SL538P-201ENST00000494227 ARHGEF12Q9NZN5 1544 aa13.86□□□□□ -0.19
RN7SL538P-201ENST00000494227 MAP3K1Q13233 1512 aa13.85□□□□□ -0.19
RN7SL538P-201ENST00000494227 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.85□□□□□ -0.19
RN7SL538P-201ENST00000494227 HNRNPUL2Q1KMD3 747 aaKnown RBP13.85□□□□□ -0.19
RN7SL538P-201ENST00000494227 KIF14Q15058 1648 aa13.85□□□□□ -0.19
RN7SL538P-201ENST00000494227 TIAM1Q13009 1591 aa13.83□□□□□ -0.19
RN7SL538P-201ENST00000494227 MYO5CQ9NQX4 1742 aa13.83□□□□□ -0.2
RN7SL538P-201ENST00000494227 LRRC9Q6ZRR7 1453 aa13.82□□□□□ -0.2
RN7SL538P-201ENST00000494227 LRRIQ1Q96JM4 1722 aa13.81□□□□□ -0.2
RN7SL538P-201ENST00000494227 MLECQ14165 292 aa13.81□□□□□ -0.2
RN7SL538P-201ENST00000494227 NPM3O75607 178 aaKnown RBP13.8□□□□□ -0.2
RN7SL538P-201ENST00000494227 KCNA4P22459 653 aa13.8□□□□□ -0.2
RN7SL538P-201ENST00000494227 SPATA31D1Q6ZQQ2 1576 aa13.79□□□□□ -0.2
RN7SL538P-201ENST00000494227 ABCA6Q8N139 1617 aa13.79□□□□□ -0.2
RN7SL538P-201ENST00000494227 MAGI2Q86UL8 1455 aa13.79□□□□□ -0.2
RN7SL538P-201ENST00000494227 DIP2CQ9Y2E4 1556 aa13.79□□□□□ -0.2
RN7SL538P-201ENST00000494227 ILDR2Q71H61 639 aa13.78□□□□□ -0.2
RN7SL538P-201ENST00000494227 CERKQ8TCT0 537 aa13.78□□□□□ -0.2
RN7SL538P-201ENST00000494227 C9orf84Q5VXU9 1444 aa13.78□□□□□ -0.2
RN7SL538P-201ENST00000494227 KDM5CP41229 1560 aa13.78□□□□□ -0.2
RN7SL538P-201ENST00000494227 C3P01024 1663 aa13.77□□□□□ -0.21
RN7SL538P-201ENST00000494227 SCAPERQ9BY12 1400 aa13.77□□□□□ -0.21
RN7SL538P-201ENST00000494227 MTUS2Q5JR59 1369 aa13.75□□□□□ -0.21
RN7SL538P-201ENST00000494227 ATP10AO60312 1499 aa13.74□□□□□ -0.21
RN7SL538P-201ENST00000494227 CCDC18Q5T9S5 1454 aa13.74□□□□□ -0.21
RN7SL538P-201ENST00000494227 PLCH2O75038 1416 aa13.74□□□□□ -0.21
RN7SL538P-201ENST00000494227 CEBPAP49715 358 aaPredicted RBP13.74□□□□□ -0.21
RN7SL538P-201ENST00000494227 DISP3Q9P2K9 1392 aa13.72□□□□□ -0.21
RN7SL538P-201ENST00000494227 PLEKHD1A6NEE1 506 aa13.72□□□□□ -0.21
RN7SL538P-201ENST00000494227 CDC42BPBQ9Y5S2 1711 aa13.72□□□□□ -0.21
RN7SL538P-201ENST00000494227 ARHGAP5Q13017 1502 aa13.7□□□□□ -0.22
RN7SL538P-201ENST00000494227 ITSN2Q9NZM3 1697 aa13.7□□□□□ -0.22
RN7SL538P-201ENST00000494227 ZNF518AQ6AHZ1 1483 aa13.7□□□□□ -0.22
RN7SL538P-201ENST00000494227 CDK11AQ9UQ88 783 aaPredicted RBP13.7□□□□□ -0.22
RN7SL538P-201ENST00000494227 LTBP4Q8N2S1 1624 aa13.7□□□□□ -0.22
RN7SL538P-201ENST00000494227 REREQ9P2R6 1566 aa13.7□□□□□ -0.22
RN7SL538P-201ENST00000494227 ABCC1P33527 1531 aa13.69□□□□□ -0.22
RN7SL538P-201ENST00000494227 PREX2Q70Z35 1606 aa13.69□□□□□ -0.22
RN7SL538P-201ENST00000494227 NCOA2Q15596 1464 aa13.68□□□□□ -0.22
RN7SL538P-201ENST00000494227 UHRF1BP1Q6BDS2 1440 aa13.68□□□□□ -0.22
RN7SL538P-201ENST00000494227 RRBP1Q9P2E9 1410 aaKnown RBP13.68□□□□□ -0.22
RN7SL538P-201ENST00000494227 TROQ12816 1431 aaPredicted RBP13.66□□□□□ -0.22
RN7SL538P-201ENST00000494227 KIDINS220Q9ULH0 1771 aa13.66□□□□□ -0.22
RN7SL538P-201ENST00000494227 EHBP1L1Q8N3D4 1523 aa13.66□□□□□ -0.22
RN7SL538P-201ENST00000494227 CCNB3Q8WWL7 1395 aa13.66□□□□□ -0.22
RN7SL538P-201ENST00000494227 CDC42BPAQ5VT25 1732 aa13.64□□□□□ -0.23
RN7SL538P-201ENST00000494227 TRAPPC8Q9Y2L5 1435 aa13.64□□□□□ -0.23
RN7SL538P-201ENST00000494227 FAM50AQ14320 339 aaKnown RBP13.63□□□□□ -0.23
RN7SL538P-201ENST00000494227 AFAP1Q8N556 730 aa13.63□□□□□ -0.23
RN7SL538P-201ENST00000494227 NCOA1Q15788 1441 aa13.63□□□□□ -0.23
RN7SL538P-201ENST00000494227 SETD1BQ9UPS6 1966 aaKnown RBP13.62□□□□□ -0.23
RN7SL538P-201ENST00000494227 MYO3AQ8NEV4 1616 aa13.62□□□□□ -0.23
RN7SL538P-201ENST00000494227 SOCS7O14512 581 aa13.62□□□□□ -0.23
RN7SL538P-201ENST00000494227 MYOM3Q5VTT5 1437 aa13.62□□□□□ -0.23
RN7SL538P-201ENST00000494227 AGLP35573 1532 aa13.61□□□□□ -0.23
RN7SL538P-201ENST00000494227 FGD6Q6ZV73 1430 aa13.61□□□□□ -0.23
RN7SL538P-201ENST00000494227 MLH3Q9UHC1 1453 aa13.61□□□□□ -0.23
RN7SL538P-201ENST00000494227 CAMSAP1Q5T5Y3 1602 aa13.61□□□□□ -0.23
RN7SL538P-201ENST00000494227 ZNF142P52746 1687 aaPredicted RBP13.6□□□□□ -0.23
RN7SL538P-201ENST00000494227 DCAF8L1A6NGE4 600 aa13.6□□□□□ -0.23
RN7SL538P-201ENST00000494227 PTPRTO14522 1441 aa13.6□□□□□ -0.23
RN7SL538P-201ENST00000494227 ITGAEP38570 1179 aa13.6□□□□□ -0.23
RN7SL538P-201ENST00000494227 MROH2AA6NES4 1674 aa13.59□□□□□ -0.23
RN7SL538P-201ENST00000494227 SAMD9LQ8IVG5 1584 aa13.58□□□□□ -0.23
RN7SL538P-201ENST00000494227 EFCAB2Q5VUJ9 269 aa13.58□□□□□ -0.24
RN7SL538P-201ENST00000494227 CLTCQ00610 1675 aaKnown RBP13.58□□□□□ -0.24
RN7SL538P-201ENST00000494227 SUPT6HQ7KZ85 1726 aaKnown RBP13.58□□□□□ -0.24
RN7SL538P-201ENST00000494227 SYCP2Q9BX26 1530 aa13.58□□□□□ -0.24
RN7SL538P-201ENST00000494227 ZNF644Q9H582 1327 aaPredicted RBP13.58□□□□□ -0.24
RN7SL538P-201ENST00000494227 GPATCH8Q9UKJ3 1502 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms