RNA–Protein interactions for RNA: ENST00000494058.5

SKIV2L-215, Transcript of Ski2 like RNA helicase, humanhuman

TSL 2

Gene SKIV2L, Length 867 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-215ENST00000494058 GPATCH8Q9UKJ3 1502 aaKnown RBP20.28■□□□□ 0.84
SKIV2L-215ENST00000494058 ITSN2Q9NZM3 1697 aa20.28■□□□□ 0.84
SKIV2L-215ENST00000494058 PREX2Q70Z35 1606 aa20.27■□□□□ 0.83
SKIV2L-215ENST00000494058 PPRC1Q5VV67 1664 aaKnown RBP20.26■□□□□ 0.83
SKIV2L-215ENST00000494058 AKNAQ7Z591 1439 aa20.25■□□□□ 0.83
SKIV2L-215ENST00000494058 CDC42BPAQ5VT25 1732 aa20.24■□□□□ 0.83
SKIV2L-215ENST00000494058 PLEKHH2Q8IVE3 1493 aa20.24■□□□□ 0.83
SKIV2L-215ENST00000494058 MYOM3Q5VTT5 1437 aa20.23■□□□□ 0.83
SKIV2L-215ENST00000494058 MIA2Q96PC5 1412 aa20.23■□□□□ 0.83
SKIV2L-215ENST00000494058 ZNF777Q9ULD5 760 aaPredicted RBP20.22■□□□□ 0.83
SKIV2L-215ENST00000494058 CDC42BPBQ9Y5S2 1711 aa20.21■□□□□ 0.83
SKIV2L-215ENST00000494058 ADGRL1O94910 1474 aa20.2■□□□□ 0.82
SKIV2L-215ENST00000494058 RSPH4AQ5TD94 716 aa20.19■□□□□ 0.82
SKIV2L-215ENST00000494058 KDM6BO15054 1643 aa20.18■□□□□ 0.82
SKIV2L-215ENST00000494058 DENND4BO75064 1496 aaPredicted RBP20.18■□□□□ 0.82
SKIV2L-215ENST00000494058 SCAPERQ9BY12 1400 aa20.17■□□□□ 0.82
SKIV2L-215ENST00000494058 KIAA1107Q9UPP5 1409 aa20.17■□□□□ 0.82
SKIV2L-215ENST00000494058 PPARGC1BQ86YN6 1023 aaKnown RBP20.16■□□□□ 0.82
SKIV2L-215ENST00000494058 FGD6Q6ZV73 1430 aa20.13■□□□□ 0.81
SKIV2L-215ENST00000494058 ZNF518AQ6AHZ1 1483 aa20.12■□□□□ 0.81
SKIV2L-215ENST00000494058 ABCC1P33527 1531 aa20.11■□□□□ 0.81
SKIV2L-215ENST00000494058 SAMD9LQ8IVG5 1584 aa20.1■□□□□ 0.81
SKIV2L-215ENST00000494058 CAMSAP2Q08AD1 1489 aa20.1■□□□□ 0.81
SKIV2L-215ENST00000494058 RAPGEF3O95398 923 aa20.09■□□□□ 0.81
SKIV2L-215ENST00000494058 POGZQ7Z3K3 1410 aa20.09■□□□□ 0.81
SKIV2L-215ENST00000494058 TSPY4P0CV99 314 aa20.08■□□□□ 0.81
SKIV2L-215ENST00000494058 TSPY10P0CW01 314 aa20.08■□□□□ 0.81
SKIV2L-215ENST00000494058 HNRNPMP52272 730 aaKnown RBP eCLIP20.08■□□□□ 0.81
SKIV2L-215ENST00000494058 ZNF644Q9H582 1327 aaPredicted RBP20.07■□□□□ 0.8
SKIV2L-215ENST00000494058 PTPN23Q9H3S7 1636 aa20.07■□□□□ 0.8
SKIV2L-215ENST00000494058 MYT1LQ9UL68 1186 aa20.07■□□□□ 0.8
SKIV2L-215ENST00000494058 MAGI2Q86UL8 1455 aa20.06■□□□□ 0.8
SKIV2L-215ENST00000494058 COL17A1Q9UMD9 1497 aaPredicted RBP20.06■□□□□ 0.8
SKIV2L-215ENST00000494058 FAM50AQ14320 339 aaKnown RBP20.06■□□□□ 0.8
SKIV2L-215ENST00000494058 SYCP2Q9BX26 1530 aa20.06■□□□□ 0.8
SKIV2L-215ENST00000494058 TCOF1Q13428 1488 aaKnown RBP20.05■□□□□ 0.8
SKIV2L-215ENST00000494058 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.05■□□□□ 0.8
SKIV2L-215ENST00000494058 AFAP1Q8N556 730 aa20.04■□□□□ 0.8
SKIV2L-215ENST00000494058 SPAG9O60271 1321 aaKnown RBP20.03■□□□□ 0.8
SKIV2L-215ENST00000494058 CCDC141Q6ZP82 1450 aa20.03■□□□□ 0.8
SKIV2L-215ENST00000494058 ARHGEF5Q12774 1597 aa20.03■□□□□ 0.8
SKIV2L-215ENST00000494058 RICTORQ6R327 1708 aa20.02■□□□□ 0.8
SKIV2L-215ENST00000494058 MBD5Q9P267 1494 aa20.02■□□□□ 0.8
SKIV2L-215ENST00000494058 ZMYM4Q5VZL5 1548 aa20.02■□□□□ 0.79
SKIV2L-215ENST00000494058 ARHGEF12Q9NZN5 1544 aa20.02■□□□□ 0.79
SKIV2L-215ENST00000494058 TRAPPC8Q9Y2L5 1435 aa20.02■□□□□ 0.79
SKIV2L-215ENST00000494058 KDM5CP41229 1560 aa20■□□□□ 0.79
SKIV2L-215ENST00000494058 MLH3Q9UHC1 1453 aa19.99■□□□□ 0.79
SKIV2L-215ENST00000494058 RTEL1-TNFRSF6BF6WH68 1400 aa19.99■□□□□ 0.79
SKIV2L-215ENST00000494058 RRBP1Q9P2E9 1410 aaKnown RBP19.99■□□□□ 0.79
SKIV2L-215ENST00000494058 FRMPD1Q5SYB0 1578 aa19.97■□□□□ 0.79
SKIV2L-215ENST00000494058 HECW2Q9P2P5 1572 aa19.97■□□□□ 0.79
SKIV2L-215ENST00000494058 ZFYVE16Q7Z3T8 1539 aa19.95■□□□□ 0.78
SKIV2L-215ENST00000494058 DAPK1P53355 1430 aa19.93■□□□□ 0.78
SKIV2L-215ENST00000494058 SHANK2Q9UPX8 1470 aa19.93■□□□□ 0.78
SKIV2L-215ENST00000494058 DNMT1P26358 1616 aaKnown RBP19.93■□□□□ 0.78
SKIV2L-215ENST00000494058 ABCC5O15440 1437 aa19.92■□□□□ 0.78
SKIV2L-215ENST00000494058 C9orf84Q5VXU9 1444 aa19.92■□□□□ 0.78
SKIV2L-215ENST00000494058 ATP7AQ04656 1500 aa19.92■□□□□ 0.78
SKIV2L-215ENST00000494058 ATP10AO60312 1499 aa19.91■□□□□ 0.78
SKIV2L-215ENST00000494058 ARHGEF40Q8TER5 1519 aa19.9■□□□□ 0.78
SKIV2L-215ENST00000494058 MAST1Q9Y2H9 1570 aa19.9■□□□□ 0.78
SKIV2L-215ENST00000494058 ANKRD30AQ9BXX3 1397 aa19.89■□□□□ 0.77
SKIV2L-215ENST00000494058 INO80Q9ULG1 1556 aaPredicted RBP19.88■□□□□ 0.77
SKIV2L-215ENST00000494058 YEATS2Q9ULM3 1422 aa19.86■□□□□ 0.77
SKIV2L-215ENST00000494058 KIDINS220Q9ULH0 1771 aa19.86■□□□□ 0.77
SKIV2L-215ENST00000494058 ITGAEP38570 1179 aa19.86■□□□□ 0.77
SKIV2L-215ENST00000494058 CROCC2H7BZ55 1655 aa19.86■□□□□ 0.77
SKIV2L-215ENST00000494058 ARID4BQ4LE39 1312 aaPredicted RBP19.84■□□□□ 0.77
SKIV2L-215ENST00000494058 CHIC2Q9UKJ5 165 aa19.84■□□□□ 0.77
SKIV2L-215ENST00000494058 REREQ9P2R6 1566 aa19.83■□□□□ 0.77
SKIV2L-215ENST00000494058 ADGBQ8N7X0 1667 aa19.83■□□□□ 0.76
SKIV2L-215ENST00000494058 DIP2CQ9Y2E4 1556 aa19.83■□□□□ 0.76
SKIV2L-215ENST00000494058 ROCK1Q13464 1354 aa19.83■□□□□ 0.76
SKIV2L-215ENST00000494058 A2MP01023 1474 aa19.82■□□□□ 0.76
SKIV2L-215ENST00000494058 PLXNC1O60486 1568 aa19.82■□□□□ 0.76
SKIV2L-215ENST00000494058 DHX29Q7Z478 1369 aaKnown RBP19.82■□□□□ 0.76
SKIV2L-215ENST00000494058 ADGRL2O95490 1459 aa19.81■□□□□ 0.76
SKIV2L-215ENST00000494058 KIF15Q9NS87 1388 aa19.81■□□□□ 0.76
SKIV2L-215ENST00000494058 ABCA6Q8N139 1617 aa19.8■□□□□ 0.76
SKIV2L-215ENST00000494058 NCOA1Q15788 1441 aa19.8■□□□□ 0.76
SKIV2L-215ENST00000494058 RRP7BPQ9NSQ0 103 aa19.8■□□□□ 0.76
SKIV2L-215ENST00000494058 DUOX2Q9NRD8 1548 aa19.79■□□□□ 0.76
SKIV2L-215ENST00000494058 AGLP35573 1532 aa19.77■□□□□ 0.76
SKIV2L-215ENST00000494058 PPP6R1Q9UPN7 881 aa19.75■□□□□ 0.75
SKIV2L-215ENST00000494058 ERBINQ96RT1 1412 aa19.75■□□□□ 0.75
SKIV2L-215ENST00000494058 ACIN1Q9UKV3 1341 aaKnown RBP19.75■□□□□ 0.75
SKIV2L-215ENST00000494058 ESF1Q9H501 851 aaKnown RBP19.74■□□□□ 0.75
SKIV2L-215ENST00000494058 PTPRKQ15262 1439 aa19.74■□□□□ 0.75
SKIV2L-215ENST00000494058 TRIM26Q12899 539 aaPredicted RBP19.73■□□□□ 0.75
SKIV2L-215ENST00000494058 KIF3BO15066 747 aa19.72■□□□□ 0.75
SKIV2L-215ENST00000494058 ANKRD50Q9ULJ7 1429 aa19.7■□□□□ 0.74
SKIV2L-215ENST00000494058 EIF2AK4Q9P2K8 1649 aaKnown RBP19.7■□□□□ 0.74
SKIV2L-215ENST00000494058 MLECQ14165 292 aa19.68■□□□□ 0.74
SKIV2L-215ENST00000494058 GGT6Q6P531 493 aa19.68■□□□□ 0.74
SKIV2L-215ENST00000494058 HFM1A2PYH4 1435 aa19.68■□□□□ 0.74
SKIV2L-215ENST00000494058 KANK1Q14678 1352 aa19.67■□□□□ 0.74
SKIV2L-215ENST00000494058 BCORL1Q5H9F3 1711 aa19.66■□□□□ 0.74
SKIV2L-215ENST00000494058 NAIPQ13075 1403 aa19.64■□□□□ 0.73
SKIV2L-215ENST00000494058 FAM135AQ9P2D6 1515 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms