RNA–Protein interactions for RNA: ENST00000494019.5

RFC2-211, Transcript of replication factor C subunit 2, humanhuman

TSL 3

Gene RFC2, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-211ENST00000494019 APLP2Q06481 763 aa15.91■□□□□ 0.14
RFC2-211ENST00000494019 NCOA2Q15596 1464 aa15.91■□□□□ 0.14
RFC2-211ENST00000494019 COL17A1Q9UMD9 1497 aaPredicted RBP15.9■□□□□ 0.14
RFC2-211ENST00000494019 FRMPD1Q5SYB0 1578 aa15.89■□□□□ 0.13
RFC2-211ENST00000494019 AKNAQ7Z591 1439 aa15.88■□□□□ 0.13
RFC2-211ENST00000494019 ADGRL1O94910 1474 aa15.88■□□□□ 0.13
RFC2-211ENST00000494019 GPATCH8Q9UKJ3 1502 aaKnown RBP15.88■□□□□ 0.13
RFC2-211ENST00000494019 PHLDB1Q86UU1 1377 aa15.87■□□□□ 0.13
RFC2-211ENST00000494019 CCNB3Q8WWL7 1395 aa15.87■□□□□ 0.13
RFC2-211ENST00000494019 SAMD9LQ8IVG5 1584 aa15.87■□□□□ 0.13
RFC2-211ENST00000494019 ABCC1P33527 1531 aa15.86■□□□□ 0.13
RFC2-211ENST00000494019 KANK4Q5T7N3 995 aaPredicted RBP15.86■□□□□ 0.13
RFC2-211ENST00000494019 DENND4BO75064 1496 aaPredicted RBP15.84■□□□□ 0.13
RFC2-211ENST00000494019 EFCAB2Q5VUJ9 269 aa15.83■□□□□ 0.12
RFC2-211ENST00000494019 SYCP2Q9BX26 1530 aa15.82■□□□□ 0.12
RFC2-211ENST00000494019 ZMYM4Q5VZL5 1548 aa15.81■□□□□ 0.12
RFC2-211ENST00000494019 SCAPERQ9BY12 1400 aa15.81■□□□□ 0.12
RFC2-211ENST00000494019 POGZQ7Z3K3 1410 aa15.8■□□□□ 0.12
RFC2-211ENST00000494019 KDM5CP41229 1560 aa15.79■□□□□ 0.12
RFC2-211ENST00000494019 ZNF518AQ6AHZ1 1483 aa15.78■□□□□ 0.12
RFC2-211ENST00000494019 CFDP1Q9UEE9 299 aaPredicted RBP15.78■□□□□ 0.12
RFC2-211ENST00000494019 ZNF777Q9ULD5 760 aaPredicted RBP15.78■□□□□ 0.12
RFC2-211ENST00000494019 HECW2Q9P2P5 1572 aa15.78■□□□□ 0.12
RFC2-211ENST00000494019 ARHGEF40Q8TER5 1519 aa15.78■□□□□ 0.12
RFC2-211ENST00000494019 ARHGEF12Q9NZN5 1544 aa15.78■□□□□ 0.12
RFC2-211ENST00000494019 CAMSAP2Q08AD1 1489 aa15.78■□□□□ 0.12
RFC2-211ENST00000494019 PLEKHH2Q8IVE3 1493 aa15.78■□□□□ 0.12
RFC2-211ENST00000494019 MYOM3Q5VTT5 1437 aa15.77■□□□□ 0.12
RFC2-211ENST00000494019 RAPGEF3O95398 923 aa15.77■□□□□ 0.12
RFC2-211ENST00000494019 PTPN23Q9H3S7 1636 aa15.76■□□□□ 0.11
RFC2-211ENST00000494019 ZFYVE16Q7Z3T8 1539 aa15.75■□□□□ 0.11
RFC2-211ENST00000494019 KIDINS220Q9ULH0 1771 aa15.73■□□□□ 0.11
RFC2-211ENST00000494019 TRAPPC8Q9Y2L5 1435 aa15.73■□□□□ 0.11
RFC2-211ENST00000494019 CROCC2H7BZ55 1655 aa15.73■□□□□ 0.11
RFC2-211ENST00000494019 ABCA6Q8N139 1617 aa15.72■□□□□ 0.11
RFC2-211ENST00000494019 INO80Q9ULG1 1556 aaPredicted RBP15.72■□□□□ 0.11
RFC2-211ENST00000494019 MIA2Q96PC5 1412 aa15.72■□□□□ 0.11
RFC2-211ENST00000494019 KIAA1107Q9UPP5 1409 aa15.72■□□□□ 0.11
RFC2-211ENST00000494019 MAGI2Q86UL8 1455 aa15.71■□□□□ 0.1
RFC2-211ENST00000494019 ARHGEF5Q12774 1597 aa15.7■□□□□ 0.1
RFC2-211ENST00000494019 ZNF644Q9H582 1327 aaPredicted RBP15.7■□□□□ 0.1
RFC2-211ENST00000494019 DIP2CQ9Y2E4 1556 aa15.7■□□□□ 0.1
RFC2-211ENST00000494019 FGD6Q6ZV73 1430 aa15.69■□□□□ 0.1
RFC2-211ENST00000494019 SIGLEC1Q9BZZ2 1709 aa15.69■□□□□ 0.1
RFC2-211ENST00000494019 PPARGC1BQ86YN6 1023 aaKnown RBP15.69■□□□□ 0.1
RFC2-211ENST00000494019 YEATS2Q9ULM3 1422 aa15.68■□□□□ 0.1
RFC2-211ENST00000494019 ATP7AQ04656 1500 aa15.68■□□□□ 0.1
RFC2-211ENST00000494019 CCDC141Q6ZP82 1450 aa15.68■□□□□ 0.1
RFC2-211ENST00000494019 MBD5Q9P267 1494 aa15.68■□□□□ 0.1
RFC2-211ENST00000494019 HNRNPMP52272 730 aaKnown RBP eCLIP15.68■□□□□ 0.1
RFC2-211ENST00000494019 AFAP1Q8N556 730 aa15.68■□□□□ 0.1
RFC2-211ENST00000494019 ADGBQ8N7X0 1667 aa15.67■□□□□ 0.1
RFC2-211ENST00000494019 MLH3Q9UHC1 1453 aa15.67■□□□□ 0.1
RFC2-211ENST00000494019 DNMT1P26358 1616 aaKnown RBP15.67■□□□□ 0.1
RFC2-211ENST00000494019 TCOF1Q13428 1488 aaKnown RBP15.66■□□□□ 0.1
RFC2-211ENST00000494019 MYT1LQ9UL68 1186 aa15.65■□□□□ 0.1
RFC2-211ENST00000494019 MAST1Q9Y2H9 1570 aa15.63■□□□□ 0.09
RFC2-211ENST00000494019 C9orf84Q5VXU9 1444 aa15.63■□□□□ 0.09
RFC2-211ENST00000494019 BCORL1Q5H9F3 1711 aa15.63■□□□□ 0.09
RFC2-211ENST00000494019 REREQ9P2R6 1566 aa15.62■□□□□ 0.09
RFC2-211ENST00000494019 SPAG9O60271 1321 aaKnown RBP15.62■□□□□ 0.09
RFC2-211ENST00000494019 ATP10AO60312 1499 aa15.61■□□□□ 0.09
RFC2-211ENST00000494019 PLXNC1O60486 1568 aa15.6■□□□□ 0.09
RFC2-211ENST00000494019 FER1L4A9Z1Z3 1794 aa15.59■□□□□ 0.09
RFC2-211ENST00000494019 DAPK1P53355 1430 aa15.59■□□□□ 0.09
RFC2-211ENST00000494019 SHANK2Q9UPX8 1470 aa15.59■□□□□ 0.09
RFC2-211ENST00000494019 RTEL1-TNFRSF6BF6WH68 1400 aa15.58■□□□□ 0.08
RFC2-211ENST00000494019 ADAMTSL3P82987 1691 aa15.57■□□□□ 0.08
RFC2-211ENST00000494019 RSPH4AQ5TD94 716 aa15.57■□□□□ 0.08
RFC2-211ENST00000494019 FAM50AQ14320 339 aaKnown RBP15.56■□□□□ 0.08
RFC2-211ENST00000494019 MADDQ8WXG6 1647 aa15.56■□□□□ 0.08
RFC2-211ENST00000494019 ABCC5O15440 1437 aa15.55■□□□□ 0.08
RFC2-211ENST00000494019 ARID4BQ4LE39 1312 aaPredicted RBP15.55■□□□□ 0.08
RFC2-211ENST00000494019 RIMS1Q86UR5 1692 aaKnown RBP15.54■□□□□ 0.08
RFC2-211ENST00000494019 A2MP01023 1474 aa15.54■□□□□ 0.08
RFC2-211ENST00000494019 TSPY4P0CV99 314 aa15.54■□□□□ 0.08
RFC2-211ENST00000494019 TSPY10P0CW01 314 aa15.54■□□□□ 0.08
RFC2-211ENST00000494019 AGLP35573 1532 aa15.53■□□□□ 0.08
RFC2-211ENST00000494019 RRBP1Q9P2E9 1410 aaKnown RBP15.53■□□□□ 0.08
RFC2-211ENST00000494019 EIF2AK4Q9P2K8 1649 aaKnown RBP15.51■□□□□ 0.07
RFC2-211ENST00000494019 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.49■□□□□ 0.07
RFC2-211ENST00000494019 DUOX2Q9NRD8 1548 aa15.48■□□□□ 0.07
RFC2-211ENST00000494019 ADGRL2O95490 1459 aa15.48■□□□□ 0.07
RFC2-211ENST00000494019 KDM4FA0A1W2PPD8 638 aa15.48■□□□□ 0.07
RFC2-211ENST00000494019 MLECQ14165 292 aa15.47■□□□□ 0.07
RFC2-211ENST00000494019 RNF17Q9BXT8 1623 aaKnown RBP15.46■□□□□ 0.07
RFC2-211ENST00000494019 CLTCQ00610 1675 aaKnown RBP15.46■□□□□ 0.07
RFC2-211ENST00000494019 DHX29Q7Z478 1369 aaKnown RBP15.46■□□□□ 0.07
RFC2-211ENST00000494019 CHIC2Q9UKJ5 165 aa15.45■□□□□ 0.06
RFC2-211ENST00000494019 ANKRD30AQ9BXX3 1397 aa15.45■□□□□ 0.06
RFC2-211ENST00000494019 KIF15Q9NS87 1388 aa15.45■□□□□ 0.06
RFC2-211ENST00000494019 MROH2AA6NES4 1674 aa15.44■□□□□ 0.06
RFC2-211ENST00000494019 PTPRKQ15262 1439 aa15.44■□□□□ 0.06
RFC2-211ENST00000494019 GCC2Q8IWJ2 1684 aa15.44■□□□□ 0.06
RFC2-211ENST00000494019 CEP152O94986 1710 aa15.43■□□□□ 0.06
RFC2-211ENST00000494019 ITGAEP38570 1179 aa15.43■□□□□ 0.06
RFC2-211ENST00000494019 C3P01024 1663 aa15.43■□□□□ 0.06
RFC2-211ENST00000494019 DEPDC5O75140 1603 aa15.43■□□□□ 0.06
RFC2-211ENST00000494019 NCOA1Q15788 1441 aa15.43■□□□□ 0.06
RFC2-211ENST00000494019 ERBINQ96RT1 1412 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms