RNA–Protein interactions for RNA: ENST00000493609.1

SMG7-208, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG7, Length 624 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-208ENST00000493609 L3MBTL3Q96JM7 780 aaPredicted RBP14.27□□□□□ -0.13
SMG7-208ENST00000493609 DPY19L2Q6NUT2 758 aa14.26□□□□□ -0.13
SMG7-208ENST00000493609 FBXO22Q8NEZ5 403 aa14.25□□□□□ -0.13
SMG7-208ENST00000493609 NLRP6P59044 892 aa14.24□□□□□ -0.13
SMG7-208ENST00000493609 C3orf67Q6ZVT6 689 aa14.22□□□□□ -0.13
SMG7-208ENST00000493609 PPP1R37O75864 691 aa14.21□□□□□ -0.13
SMG7-208ENST00000493609 MS4A4AQ96JQ5 239 aa14.17□□□□□ -0.14
SMG7-208ENST00000493609 SNPHO15079 494 aa14.15□□□□□ -0.14
SMG7-208ENST00000493609 CADPS2Q86UW7 1296 aa14.13□□□□□ -0.15
SMG7-208ENST00000493609 CDAN1Q8IWY9 1227 aa14.13□□□□□ -0.15
SMG7-208ENST00000493609 BOLA1Q9Y3E2 137 aa14.12□□□□□ -0.15
SMG7-208ENST00000493609 G3V3G9 751 aa14.07□□□□□ -0.16
SMG7-208ENST00000493609 TMEM121BQ9BXQ6 578 aaPredicted RBP14.07□□□□□ -0.16
SMG7-208ENST00000493609 MARVELD3Q96A59 401 aa14.06□□□□□ -0.16
SMG7-208ENST00000493609 BCANQ96GW7 911 aa13.96□□□□□ -0.17
SMG7-208ENST00000493609 HOXB3P14651 431 aaPredicted RBP13.94□□□□□ -0.18
SMG7-208ENST00000493609 MICALL2Q8IY33 904 aa13.94□□□□□ -0.18
SMG7-208ENST00000493609 WDR70Q9NW82 654 aa13.93□□□□□ -0.18
SMG7-208ENST00000493609 EMP3P54852 163 aa13.92□□□□□ -0.18
SMG7-208ENST00000493609 NCKAP5LQ9HCH0 1330 aa13.9□□□□□ -0.18
SMG7-208ENST00000493609 TMEM92Q6UXU6 159 aa13.9□□□□□ -0.18
SMG7-208ENST00000493609 POTEB3A0JP26 581 aa13.89□□□□□ -0.19
SMG7-208ENST00000493609 POTEBQ6S5H4 581 aa13.89□□□□□ -0.19
SMG7-208ENST00000493609 FAM205CA6NFA0 338 aa13.86□□□□□ -0.19
SMG7-208ENST00000493609 LARP6Q9BRS8 491 aaKnown RBP13.86□□□□□ -0.19
SMG7-208ENST00000493609 PDE4AP27815 886 aa13.85□□□□□ -0.19
SMG7-208ENST00000493609 HS3ST6Q96QI5 342 aa13.84□□□□□ -0.19
SMG7-208ENST00000493609 CRISPLD2Q9H0B8 497 aa13.84□□□□□ -0.19
SMG7-208ENST00000493609 DOK7Q18PE1 504 aa13.82□□□□□ -0.2
SMG7-208ENST00000493609 ZNF710Q8N1W2 664 aa13.82□□□□□ -0.2
SMG7-208ENST00000493609 KCNV2Q8TDN2 545 aa13.81□□□□□ -0.2
SMG7-208ENST00000493609 HOXB1P14653 301 aaPredicted RBP13.8□□□□□ -0.2
SMG7-208ENST00000493609 NBR1Q14596 966 aa13.79□□□□□ -0.2
SMG7-208ENST00000493609 SPNS2Q8IVW8 549 aa13.79□□□□□ -0.2
SMG7-208ENST00000493609 P3H3Q8IVL6 736 aa13.78□□□□□ -0.2
SMG7-208ENST00000493609 MMRN1Q13201 1228 aa13.77□□□□□ -0.21
SMG7-208ENST00000493609 MFSD10Q14728 455 aa13.77□□□□□ -0.21
SMG7-208ENST00000493609 DDX27Q96GQ7 796 aaKnown RBP13.77□□□□□ -0.21
SMG7-208ENST00000493609 E2F4Q16254 413 aa13.76□□□□□ -0.21
SMG7-208ENST00000493609 GPHNQ9NQX3 736 aaPredicted RBP13.76□□□□□ -0.21
SMG7-208ENST00000493609 KRTAP3-3Q9BYR6 98 aa13.75□□□□□ -0.21
SMG7-208ENST00000493609 KRTAP3-2Q9BYR7 98 aa13.75□□□□□ -0.21
SMG7-208ENST00000493609 RIMBP2O15034 1052 aa13.71□□□□□ -0.21
SMG7-208ENST00000493609 TMC2Q8TDI7 906 aa13.71□□□□□ -0.21
SMG7-208ENST00000493609 ERBB3P21860 1342 aa13.69□□□□□ -0.22
SMG7-208ENST00000493609 DSG2Q14126 1118 aa13.69□□□□□ -0.22
SMG7-208ENST00000493609 PPP1R15BQ5SWA1 713 aa13.69□□□□□ -0.22
SMG7-208ENST00000493609 C2orf72A6NCS6 295 aa13.68□□□□□ -0.22
SMG7-208ENST00000493609 GPR153Q6NV75 609 aa13.67□□□□□ -0.22
SMG7-208ENST00000493609 ZSWIM6Q9HCJ5 1215 aa13.66□□□□□ -0.22
SMG7-208ENST00000493609 KIF3CO14782 793 aa13.65□□□□□ -0.22
SMG7-208ENST00000493609 ARHGEF1Q92888 912 aaKnown RBP13.65□□□□□ -0.22
SMG7-208ENST00000493609 FOXK1P85037 733 aa13.64□□□□□ -0.23
SMG7-208ENST00000493609 CAMK2BQ13554 666 aa13.64□□□□□ -0.23
SMG7-208ENST00000493609 VARS2Q5ST30 1063 aaKnown RBP13.62□□□□□ -0.23
SMG7-208ENST00000493609 ARSIQ5FYB1 569 aa13.61□□□□□ -0.23
SMG7-208ENST00000493609 PLPP6Q8IY26 295 aa13.61□□□□□ -0.23
SMG7-208ENST00000493609 KHSRPQ92945 711 aaKnown RBP eCLIP13.59□□□□□ -0.238e-8■■■□□ 17.2
SMG7-208ENST00000493609 PRKCSHP14314 528 aaPredicted RBP13.58□□□□□ -0.24
SMG7-208ENST00000493609 EMILIN3Q9NT22 766 aa13.57□□□□□ -0.24
SMG7-208ENST00000493609 SEMA3EO15041 775 aa13.54□□□□□ -0.24
SMG7-208ENST00000493609 ARIH1Q9Y4X5 557 aaPredicted RBP13.54□□□□□ -0.24
SMG7-208ENST00000493609 TPRNQ4KMQ1 711 aa13.53□□□□□ -0.24
SMG7-208ENST00000493609 ZNF687Q8N1G0 1237 aa13.52□□□□□ -0.25
SMG7-208ENST00000493609 DPYSL4O14531 572 aa13.51□□□□□ -0.25
SMG7-208ENST00000493609 ZNF316A6NFI3 1004 aaPredicted RBP13.48□□□□□ -0.25
SMG7-208ENST00000493609 UPF1Q92900 1129 aaKnown RBP eCLIP13.46□□□□□ -0.25
SMG7-208ENST00000493609 TESPA1A2RU30 521 aaPredicted RBP13.45□□□□□ -0.26
SMG7-208ENST00000493609 NUDT7P0C024 238 aa13.44□□□□□ -0.26
SMG7-208ENST00000493609 SLC34A2O95436 690 aa13.43□□□□□ -0.26
SMG7-208ENST00000493609 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.43□□□□□ -0.26
SMG7-208ENST00000493609 PCDHGA4Q9Y5G9 962 aa13.43□□□□□ -0.26
SMG7-208ENST00000493609 MAP3K9P80192 1104 aa13.42□□□□□ -0.26
SMG7-208ENST00000493609 OXER1Q8TDS5 423 aa13.41□□□□□ -0.26
SMG7-208ENST00000493609 PDIA6Q15084 440 aa13.4□□□□□ -0.26
SMG7-208ENST00000493609 LMOD2Q6P5Q4 547 aa13.4□□□□□ -0.26
SMG7-208ENST00000493609 MLLT3P42568 568 aaPredicted RBP13.39□□□□□ -0.27
SMG7-208ENST00000493609 SPDYE16A6NNV3 312 aaPredicted RBP13.38□□□□□ -0.27
SMG7-208ENST00000493609 TULP1O00294 542 aaPredicted RBP13.38□□□□□ -0.27
SMG7-208ENST00000493609 LHX6Q9UPM6 363 aa13.38□□□□□ -0.27
SMG7-208ENST00000493609 ANKRD13DQ6ZTN6 518 aa13.34□□□□□ -0.27
SMG7-208ENST00000493609 PTCD2Q8WV60 388 aaKnown RBP13.34□□□□□ -0.27
SMG7-208ENST00000493609 SMYD5Q6GMV2 418 aa13.33□□□□□ -0.28
SMG7-208ENST00000493609 RNF166Q96A37 237 aaPredicted RBP13.32□□□□□ -0.28
SMG7-208ENST00000493609 MYT1LQ9UL68 1186 aa13.32□□□□□ -0.28
SMG7-208ENST00000493609 TBC1D12O60347 775 aa13.31□□□□□ -0.28
SMG7-208ENST00000493609 POTEEQ6S8J3 1075 aa13.31□□□□□ -0.28
SMG7-208ENST00000493609 EVI5O60447 810 aa13.29□□□□□ -0.28
SMG7-208ENST00000493609 LSM11P83369 360 aaKnown RBP eCLIP13.29□□□□□ -0.28
SMG7-208ENST00000493609 KDM4FA0A1W2PPD8 638 aa13.28□□□□□ -0.28
SMG7-208ENST00000493609 RBM26Q5T8P6 1007 aaKnown RBP13.28□□□□□ -0.28
SMG7-208ENST00000493609 AXIN2Q9Y2T1 843 aa13.28□□□□□ -0.28
SMG7-208ENST00000493609 GRXCR2A6NFK2 248 aa13.27□□□□□ -0.29
SMG7-208ENST00000493609 PBX2P40425 430 aa13.24□□□□□ -0.29
SMG7-208ENST00000493609 DDX12PQ92771 950 aa13.24□□□□□ -0.29
SMG7-208ENST00000493609 ZC3H15Q8WU90 426 aaKnown RBP13.23□□□□□ -0.29
SMG7-208ENST00000493609 PTGER2P43116 358 aa13.22□□□□□ -0.29
SMG7-208ENST00000493609 ANO8Q9HCE9 1232 aaPredicted RBP13.2□□□□□ -0.3
SMG7-208ENST00000493609 OSBPP22059 807 aa13.18□□□□□ -0.3
SMG7-208ENST00000493609 PSDA5PKW4 1024 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms