RNA–Protein interactions for RNA: ENST00000493606.1

ARFGAP3-206, Transcript of ADP ribosylation factor GTPase activating protein 3, humanhuman

TSL 2

Gene ARFGAP3, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP3-206ENST00000493606 ZFYVE16Q7Z3T8 1539 aa22.9■■□□□ 1.26
ARFGAP3-206ENST00000493606 CDK11AQ9UQ88 783 aaPredicted RBP22.88■■□□□ 1.25
ARFGAP3-206ENST00000493606 POGZQ7Z3K3 1410 aa22.88■■□□□ 1.25
ARFGAP3-206ENST00000493606 ARID4BQ4LE39 1312 aaPredicted RBP22.86■■□□□ 1.25
ARFGAP3-206ENST00000493606 CLIP1P30622 1438 aa22.86■■□□□ 1.25
ARFGAP3-206ENST00000493606 CASKIN1Q8WXD9 1431 aa22.86■■□□□ 1.25
ARFGAP3-206ENST00000493606 TROQ12816 1431 aaPredicted RBP22.85■■□□□ 1.25
ARFGAP3-206ENST00000493606 SCAPERQ9BY12 1400 aa22.85■■□□□ 1.25
ARFGAP3-206ENST00000493606 CCDC18Q5T9S5 1454 aa22.85■■□□□ 1.25
ARFGAP3-206ENST00000493606 MAGI2Q86UL8 1455 aa22.83■■□□□ 1.25
ARFGAP3-206ENST00000493606 CDC42BPBQ9Y5S2 1711 aa22.82■■□□□ 1.24
ARFGAP3-206ENST00000493606 FYCO1Q9BQS8 1478 aa22.82■■□□□ 1.24
ARFGAP3-206ENST00000493606 LMTK3Q96Q04 1460 aa22.8■■□□□ 1.24
ARFGAP3-206ENST00000493606 FER1L4A9Z1Z3 1794 aa22.8■■□□□ 1.24
ARFGAP3-206ENST00000493606 ARHGAP5Q13017 1502 aa22.77■■□□□ 1.24
ARFGAP3-206ENST00000493606 KDM5CP41229 1560 aa22.76■■□□□ 1.23
ARFGAP3-206ENST00000493606 PREX2Q70Z35 1606 aa22.76■■□□□ 1.23
ARFGAP3-206ENST00000493606 EFCAB2Q5VUJ9 269 aa22.74■■□□□ 1.23
ARFGAP3-206ENST00000493606 CDC42BPAQ5VT25 1732 aa22.73■■□□□ 1.23
ARFGAP3-206ENST00000493606 ATP10AO60312 1499 aa22.73■■□□□ 1.23
ARFGAP3-206ENST00000493606 ARHGEF12Q9NZN5 1544 aa22.72■■□□□ 1.23
ARFGAP3-206ENST00000493606 ZNF518AQ6AHZ1 1483 aa22.72■■□□□ 1.23
ARFGAP3-206ENST00000493606 C9orf84Q5VXU9 1444 aa22.71■■□□□ 1.23
ARFGAP3-206ENST00000493606 DIP2CQ9Y2E4 1556 aa22.7■■□□□ 1.22
ARFGAP3-206ENST00000493606 ITSN2Q9NZM3 1697 aa22.7■■□□□ 1.22
ARFGAP3-206ENST00000493606 ABCA6Q8N139 1617 aa22.69■■□□□ 1.22
ARFGAP3-206ENST00000493606 ABCC1P33527 1531 aa22.69■■□□□ 1.22
ARFGAP3-206ENST00000493606 MLECQ14165 292 aa22.68■■□□□ 1.22
ARFGAP3-206ENST00000493606 CEP162Q5TB80 1403 aa22.67■■□□□ 1.22
ARFGAP3-206ENST00000493606 AFAP1Q8N556 730 aa22.67■■□□□ 1.22
ARFGAP3-206ENST00000493606 PLPPR3Q6T4P5 718 aa22.65■■□□□ 1.22
ARFGAP3-206ENST00000493606 TRAPPC8Q9Y2L5 1435 aa22.64■■□□□ 1.21
ARFGAP3-206ENST00000493606 REREQ9P2R6 1566 aa22.63■■□□□ 1.21
ARFGAP3-206ENST00000493606 HSPA2P54652 639 aa22.62■■□□□ 1.21
ARFGAP3-206ENST00000493606 KIDINS220Q9ULH0 1771 aa22.62■■□□□ 1.21
ARFGAP3-206ENST00000493606 MLH3Q9UHC1 1453 aa22.6■■□□□ 1.21
ARFGAP3-206ENST00000493606 SAMD9LQ8IVG5 1584 aa22.6■■□□□ 1.21
ARFGAP3-206ENST00000493606 PREX1Q8TCU6 1659 aa22.59■■□□□ 1.21
ARFGAP3-206ENST00000493606 MTUS2Q5JR59 1369 aa22.55■■□□□ 1.2
ARFGAP3-206ENST00000493606 EHBP1L1Q8N3D4 1523 aa22.55■■□□□ 1.2
ARFGAP3-206ENST00000493606 GPATCH8Q9UKJ3 1502 aaKnown RBP22.54■■□□□ 1.2
ARFGAP3-206ENST00000493606 C3P01024 1663 aa22.54■■□□□ 1.2
ARFGAP3-206ENST00000493606 AGLP35573 1532 aa22.53■■□□□ 1.2
ARFGAP3-206ENST00000493606 SYCP2Q9BX26 1530 aa22.53■■□□□ 1.2
ARFGAP3-206ENST00000493606 CEBPAP49715 358 aaPredicted RBP22.53■■□□□ 1.2
ARFGAP3-206ENST00000493606 MYT1LQ9UL68 1186 aa22.53■■□□□ 1.2
ARFGAP3-206ENST00000493606 FBXO41Q8TF61 875 aa22.5■■□□□ 1.19
ARFGAP3-206ENST00000493606 STRCQ7RTU9 1775 aa22.49■■□□□ 1.19
ARFGAP3-206ENST00000493606 LOC105371045A0A1W2PR82 267 aa22.49■■□□□ 1.19
ARFGAP3-206ENST00000493606 ZNF777Q9ULD5 760 aaPredicted RBP22.49■■□□□ 1.19
ARFGAP3-206ENST00000493606 CCNB3Q8WWL7 1395 aa22.49■■□□□ 1.19
ARFGAP3-206ENST00000493606 TIAM1Q13009 1591 aa22.48■■□□□ 1.19
ARFGAP3-206ENST00000493606 SETD1BQ9UPS6 1966 aaKnown RBP22.47■■□□□ 1.19
ARFGAP3-206ENST00000493606 INO80Q9ULG1 1556 aaPredicted RBP22.46■■□□□ 1.19
ARFGAP3-206ENST00000493606 SUPT6HQ7KZ85 1726 aaKnown RBP22.45■■□□□ 1.19
ARFGAP3-206ENST00000493606 PLEKHH2Q8IVE3 1493 aa22.43■■□□□ 1.18
ARFGAP3-206ENST00000493606 CFDP1Q9UEE9 299 aaPredicted RBP22.43■■□□□ 1.18
ARFGAP3-206ENST00000493606 ATP7AQ04656 1500 aa22.42■■□□□ 1.18
ARFGAP3-206ENST00000493606 PLXNC1O60486 1568 aa22.42■■□□□ 1.18
ARFGAP3-206ENST00000493606 VPS8Q8N3P4 1428 aa22.41■■□□□ 1.18
ARFGAP3-206ENST00000493606 HNRNPMP52272 730 aaKnown RBP eCLIP22.41■■□□□ 1.18
ARFGAP3-206ENST00000493606 UHRF1BP1Q6BDS2 1440 aa22.4■■□□□ 1.18
ARFGAP3-206ENST00000493606 KIAA1107Q9UPP5 1409 aa22.4■■□□□ 1.18
ARFGAP3-206ENST00000493606 MROH2AA6NES4 1674 aa22.39■■□□□ 1.17
ARFGAP3-206ENST00000493606 NCOA2Q15596 1464 aa22.36■■□□□ 1.17
ARFGAP3-206ENST00000493606 SPAG9O60271 1321 aaKnown RBP22.35■■□□□ 1.17
ARFGAP3-206ENST00000493606 CLTCQ00610 1675 aaKnown RBP22.35■■□□□ 1.17
ARFGAP3-206ENST00000493606 ZNF644Q9H582 1327 aaPredicted RBP22.33■■□□□ 1.17
ARFGAP3-206ENST00000493606 CNTLNQ9NXG0 1405 aa22.33■■□□□ 1.17
ARFGAP3-206ENST00000493606 MBD5Q9P267 1494 aa22.33■■□□□ 1.16
ARFGAP3-206ENST00000493606 ADGBQ8N7X0 1667 aa22.33■■□□□ 1.16
ARFGAP3-206ENST00000493606 A2MP01023 1474 aa22.32■■□□□ 1.16
ARFGAP3-206ENST00000493606 LRRC9Q6ZRR7 1453 aa22.3■■□□□ 1.16
ARFGAP3-206ENST00000493606 CERKQ8TCT0 537 aa22.29■■□□□ 1.16
ARFGAP3-206ENST00000493606 CAMSAP2Q08AD1 1489 aa22.28■■□□□ 1.16
ARFGAP3-206ENST00000493606 ESF1Q9H501 851 aaKnown RBP22.27■■□□□ 1.16
ARFGAP3-206ENST00000493606 MAP3K1Q13233 1512 aa22.26■■□□□ 1.15
ARFGAP3-206ENST00000493606 NPATQ14207 1427 aa22.25■■□□□ 1.15
ARFGAP3-206ENST00000493606 MYO3AQ8NEV4 1616 aa22.25■■□□□ 1.15
ARFGAP3-206ENST00000493606 ZMYM3Q14202 1370 aa22.25■■□□□ 1.15
ARFGAP3-206ENST00000493606 ZNF142P52746 1687 aaPredicted RBP22.24■■□□□ 1.15
ARFGAP3-206ENST00000493606 NCOA1Q15788 1441 aa22.23■■□□□ 1.15
ARFGAP3-206ENST00000493606 CCDC141Q6ZP82 1450 aa22.23■■□□□ 1.15
ARFGAP3-206ENST00000493606 PTPRTO14522 1441 aa22.22■■□□□ 1.15
ARFGAP3-206ENST00000493606 CAMSAP1Q5T5Y3 1602 aa22.21■■□□□ 1.15
ARFGAP3-206ENST00000493606 RTEL1-TNFRSF6BF6WH68 1400 aa22.2■■□□□ 1.14
ARFGAP3-206ENST00000493606 PTPRKQ15262 1439 aa22.2■■□□□ 1.14
ARFGAP3-206ENST00000493606 ARHGEF5Q12774 1597 aa22.2■■□□□ 1.14
ARFGAP3-206ENST00000493606 LTBP4Q8N2S1 1624 aa22.19■■□□□ 1.14
ARFGAP3-206ENST00000493606 KANK4Q5T7N3 995 aaPredicted RBP22.18■■□□□ 1.14
ARFGAP3-206ENST00000493606 DMRT2Q9Y5R5 561 aa22.18■■□□□ 1.14
ARFGAP3-206ENST00000493606 CEP170BQ9Y4F5 1589 aaPredicted RBP22.17■■□□□ 1.14
ARFGAP3-206ENST00000493606 GGT6Q6P531 493 aa22.16■■□□□ 1.14
ARFGAP3-206ENST00000493606 DHX29Q7Z478 1369 aaKnown RBP22.13■■□□□ 1.13
ARFGAP3-206ENST00000493606 MYOM3Q5VTT5 1437 aa22.13■■□□□ 1.13
ARFGAP3-206ENST00000493606 APLP2Q06481 763 aa22.12■■□□□ 1.13
ARFGAP3-206ENST00000493606 RSPH4AQ5TD94 716 aa22.12■■□□□ 1.13
ARFGAP3-206ENST00000493606 MAST1Q9Y2H9 1570 aa22.09■■□□□ 1.13
ARFGAP3-206ENST00000493606 MIA2Q96PC5 1412 aa22.09■■□□□ 1.13
ARFGAP3-206ENST00000493606 PLA2R1Q13018 1463 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms