RNA–Protein interactions for RNA: ENST00000493389.1

PMM1-209, Transcript of phosphomannomutase 1, humanhuman

TSL 3

Gene PMM1, Length 866 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMM1-209ENST00000493389 AEBP2Q6ZN18 517 aaPredicted RBP28.33■■■□□ 2.13
PMM1-209ENST00000493389 POGZQ7Z3K3 1410 aa28.31■■■□□ 2.12
PMM1-209ENST00000493389 EHBP1L1Q8N3D4 1523 aa28.3■■■□□ 2.12
PMM1-209ENST00000493389 GPATCH8Q9UKJ3 1502 aaKnown RBP28.3■■■□□ 2.12
PMM1-209ENST00000493389 PREX2Q70Z35 1606 aa28.29■■■□□ 2.12
PMM1-209ENST00000493389 RICTORQ6R327 1708 aa28.29■■■□□ 2.12
PMM1-209ENST00000493389 TIAM1Q13009 1591 aa28.28■■■□□ 2.12
PMM1-209ENST00000493389 CDC42BPBQ9Y5S2 1711 aa28.27■■■□□ 2.12
PMM1-209ENST00000493389 CCNB3Q8WWL7 1395 aa28.26■■■□□ 2.12
PMM1-209ENST00000493389 ZNF777Q9ULD5 760 aaPredicted RBP28.24■■■□□ 2.11
PMM1-209ENST00000493389 CDC42BPAQ5VT25 1732 aa28.23■■■□□ 2.11
PMM1-209ENST00000493389 ZMYM4Q5VZL5 1548 aa28.23■■■□□ 2.11
PMM1-209ENST00000493389 AFAP1Q8N556 730 aa28.23■■■□□ 2.11
PMM1-209ENST00000493389 YEATS2Q9ULM3 1422 aa28.22■■■□□ 2.11
PMM1-209ENST00000493389 ARHGEF12Q9NZN5 1544 aa28.22■■■□□ 2.11
PMM1-209ENST00000493389 CFDP1Q9UEE9 299 aaPredicted RBP28.21■■■□□ 2.11
PMM1-209ENST00000493389 ABCC1P33527 1531 aa28.2■■■□□ 2.1
PMM1-209ENST00000493389 ARHGEF40Q8TER5 1519 aa28.2■■■□□ 2.1
PMM1-209ENST00000493389 KANK4Q5T7N3 995 aaPredicted RBP28.2■■■□□ 2.1
PMM1-209ENST00000493389 LRRC9Q6ZRR7 1453 aa28.19■■■□□ 2.1
PMM1-209ENST00000493389 TRAPPC8Q9Y2L5 1435 aa28.18■■■□□ 2.1
PMM1-209ENST00000493389 NCOA2Q15596 1464 aa28.18■■■□□ 2.1
PMM1-209ENST00000493389 ZNF518AQ6AHZ1 1483 aa28.18■■■□□ 2.1
PMM1-209ENST00000493389 MAGI2Q86UL8 1455 aa28.17■■■□□ 2.1
PMM1-209ENST00000493389 ZFYVE16Q7Z3T8 1539 aa28.17■■■□□ 2.1
PMM1-209ENST00000493389 MAP3K1Q13233 1512 aa28.16■■■□□ 2.1
PMM1-209ENST00000493389 SAMD9LQ8IVG5 1584 aa28.16■■■□□ 2.1
PMM1-209ENST00000493389 KDM5CP41229 1560 aa28.12■■■□□ 2.09
PMM1-209ENST00000493389 HNRNPMP52272 730 aaKnown RBP eCLIP28.12■■■□□ 2.09
PMM1-209ENST00000493389 ARID4BQ4LE39 1312 aaPredicted RBP28.12■■■□□ 2.09
PMM1-209ENST00000493389 ZNF644Q9H582 1327 aaPredicted RBP28.12■■■□□ 2.09
PMM1-209ENST00000493389 SYCP2Q9BX26 1530 aa28.1■■■□□ 2.09
PMM1-209ENST00000493389 SUPT6HQ7KZ85 1726 aaKnown RBP28.09■■■□□ 2.09
PMM1-209ENST00000493389 ITSN2Q9NZM3 1697 aa28.09■■■□□ 2.09
PMM1-209ENST00000493389 APLP2Q06481 763 aa28.07■■■□□ 2.08
PMM1-209ENST00000493389 MYT1LQ9UL68 1186 aa28.07■■■□□ 2.08
PMM1-209ENST00000493389 KIAA1107Q9UPP5 1409 aa28.07■■■□□ 2.08
PMM1-209ENST00000493389 PLEKHH2Q8IVE3 1493 aa28.05■■■□□ 2.08
PMM1-209ENST00000493389 ATP10AO60312 1499 aa28.04■■■□□ 2.08
PMM1-209ENST00000493389 MLH3Q9UHC1 1453 aa28.04■■■□□ 2.08
PMM1-209ENST00000493389 HECW2Q9P2P5 1572 aa28.03■■■□□ 2.08
PMM1-209ENST00000493389 C9orf84Q5VXU9 1444 aa28.01■■■□□ 2.08
PMM1-209ENST00000493389 SIGLEC1Q9BZZ2 1709 aa28.01■■■□□ 2.07
PMM1-209ENST00000493389 DIP2CQ9Y2E4 1556 aa27.99■■■□□ 2.07
PMM1-209ENST00000493389 SPAG9O60271 1321 aaKnown RBP27.98■■■□□ 2.07
PMM1-209ENST00000493389 MBD5Q9P267 1494 aa27.98■■■□□ 2.07
PMM1-209ENST00000493389 MLECQ14165 292 aa27.96■■■□□ 2.07
PMM1-209ENST00000493389 ABCA6Q8N139 1617 aa27.96■■■□□ 2.07
PMM1-209ENST00000493389 CAMSAP2Q08AD1 1489 aa27.95■■■□□ 2.07
PMM1-209ENST00000493389 BCORL1Q5H9F3 1711 aa27.95■■■□□ 2.07
PMM1-209ENST00000493389 ADAMTSL3P82987 1691 aa27.95■■■□□ 2.07
PMM1-209ENST00000493389 MYOM3Q5VTT5 1437 aa27.92■■■□□ 2.06
PMM1-209ENST00000493389 KIDINS220Q9ULH0 1771 aa27.92■■■□□ 2.06
PMM1-209ENST00000493389 MADDQ8WXG6 1647 aa27.89■■■□□ 2.06
PMM1-209ENST00000493389 ATP7AQ04656 1500 aa27.88■■■□□ 2.05
PMM1-209ENST00000493389 PTPRMP28827 1452 aa27.88■■■□□ 2.05
PMM1-209ENST00000493389 REREQ9P2R6 1566 aa27.86■■■□□ 2.05
PMM1-209ENST00000493389 INO80Q9ULG1 1556 aaPredicted RBP27.86■■■□□ 2.05
PMM1-209ENST00000493389 MIA2Q96PC5 1412 aa27.86■■■□□ 2.05
PMM1-209ENST00000493389 CCDC141Q6ZP82 1450 aa27.85■■■□□ 2.05
PMM1-209ENST00000493389 RSPH4AQ5TD94 716 aa27.8■■■□□ 2.04
PMM1-209ENST00000493389 AGLP35573 1532 aa27.8■■■□□ 2.04
PMM1-209ENST00000493389 RTEL1-TNFRSF6BF6WH68 1400 aa27.79■■■□□ 2.04
PMM1-209ENST00000493389 ARHGEF5Q12774 1597 aa27.78■■■□□ 2.04
PMM1-209ENST00000493389 RIMS1Q86UR5 1692 aaKnown RBP27.78■■■□□ 2.04
PMM1-209ENST00000493389 A2MP01023 1474 aa27.77■■■□□ 2.04
PMM1-209ENST00000493389 PLPPR3Q6T4P5 718 aa27.77■■■□□ 2.04
PMM1-209ENST00000493389 FGD6Q6ZV73 1430 aa27.76■■■□□ 2.04
PMM1-209ENST00000493389 PLXNC1O60486 1568 aa27.73■■■□□ 2.03
PMM1-209ENST00000493389 TSPY4P0CV99 314 aa27.73■■■□□ 2.03
PMM1-209ENST00000493389 TSPY10P0CW01 314 aa27.73■■■□□ 2.03
PMM1-209ENST00000493389 PPARGC1BQ86YN6 1023 aaKnown RBP27.72■■■□□ 2.03
PMM1-209ENST00000493389 PTPN23Q9H3S7 1636 aa27.7■■■□□ 2.03
PMM1-209ENST00000493389 FER1L4A9Z1Z3 1794 aa27.69■■■□□ 2.02
PMM1-209ENST00000493389 TCOF1Q13428 1488 aaKnown RBP27.69■■■□□ 2.02
PMM1-209ENST00000493389 DHX29Q7Z478 1369 aaKnown RBP27.68■■■□□ 2.02
PMM1-209ENST00000493389 CEBPAP49715 358 aaPredicted RBP27.67■■■□□ 2.02
PMM1-209ENST00000493389 ABCC5O15440 1437 aa27.67■■■□□ 2.02
PMM1-209ENST00000493389 ADGBQ8N7X0 1667 aa27.65■■■□□ 2.02
PMM1-209ENST00000493389 GGT6Q6P531 493 aa27.63■■■□□ 2.01
PMM1-209ENST00000493389 MAST1Q9Y2H9 1570 aa27.63■■■□□ 2.01
PMM1-209ENST00000493389 ESF1Q9H501 851 aaKnown RBP27.62■■■□□ 2.01
PMM1-209ENST00000493389 DAPK1P53355 1430 aa27.61■■■□□ 2.01
PMM1-209ENST00000493389 KIF3BO15066 747 aa27.59■■■□□ 2.01
PMM1-209ENST00000493389 FAM50AQ14320 339 aaKnown RBP27.59■■■□□ 2.01
PMM1-209ENST00000493389 SHANK2Q9UPX8 1470 aa27.57■■■□□ 2
PMM1-209ENST00000493389 CNTLNQ9NXG0 1405 aa27.56■■■□□ 2
PMM1-209ENST00000493389 DNMT1P26358 1616 aaKnown RBP27.55■■■□□ 2
PMM1-209ENST00000493389 CHIC2Q9UKJ5 165 aa27.54■■■□□ 2
PMM1-209ENST00000493389 LMTK3Q96Q04 1460 aa27.53■■■□□ 2
PMM1-209ENST00000493389 RRP7BPQ9NSQ0 103 aa27.52■■■□□ 2
PMM1-209ENST00000493389 KIF15Q9NS87 1388 aa27.51■■□□□ 1.99
PMM1-209ENST00000493389 ZMYM3Q14202 1370 aa27.5■■□□□ 1.99
PMM1-209ENST00000493389 CROCC2H7BZ55 1655 aa27.5■■□□□ 1.99
PMM1-209ENST00000493389 PPP6R1Q9UPN7 881 aa27.49■■□□□ 1.99
PMM1-209ENST00000493389 C3P01024 1663 aa27.47■■□□□ 1.99
PMM1-209ENST00000493389 HSPA2P54652 639 aa27.46■■□□□ 1.99
PMM1-209ENST00000493389 DUOX2Q9NRD8 1548 aa27.46■■□□□ 1.99
PMM1-209ENST00000493389 CLTCQ00610 1675 aaKnown RBP27.45■■□□□ 1.98
PMM1-209ENST00000493389 ANKRD30AQ9BXX3 1397 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms