RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 ARHGAP5Q13017 1502 aa12.67□□□□□ -0.38
TM4SF1-204ENST00000493348 NEO1Q92859 1461 aa12.67□□□□□ -0.38
TM4SF1-204ENST00000493348 EFCAB2Q5VUJ9 269 aa12.67□□□□□ -0.38
TM4SF1-204ENST00000493348 CCNB3Q8WWL7 1395 aa12.67□□□□□ -0.38
TM4SF1-204ENST00000493348 MAP3K1Q13233 1512 aa12.67□□□□□ -0.38
TM4SF1-204ENST00000493348 FANCAO15360 1455 aa12.66□□□□□ -0.38
TM4SF1-204ENST00000493348 PLCH2O75038 1416 aa12.65□□□□□ -0.38
TM4SF1-204ENST00000493348 ITSN2Q9NZM3 1697 aa12.65□□□□□ -0.38
TM4SF1-204ENST00000493348 ARAP3Q8WWN8 1544 aa12.64□□□□□ -0.39
TM4SF1-204ENST00000493348 PREX2Q70Z35 1606 aa12.64□□□□□ -0.39
TM4SF1-204ENST00000493348 CDC42BPAQ5VT25 1732 aa12.64□□□□□ -0.39
TM4SF1-204ENST00000493348 LRRC9Q6ZRR7 1453 aa12.64□□□□□ -0.39
TM4SF1-204ENST00000493348 CDC42BPBQ9Y5S2 1711 aa12.63□□□□□ -0.39
TM4SF1-204ENST00000493348 ZNF777Q9ULD5 760 aaPredicted RBP12.63□□□□□ -0.39
TM4SF1-204ENST00000493348 AKNAQ7Z591 1439 aa12.62□□□□□ -0.39
TM4SF1-204ENST00000493348 CFDP1Q9UEE9 299 aaPredicted RBP12.62□□□□□ -0.39
TM4SF1-204ENST00000493348 ADGRL1O94910 1474 aa12.61□□□□□ -0.39
TM4SF1-204ENST00000493348 MYT1LQ9UL68 1186 aa12.61□□□□□ -0.39
TM4SF1-204ENST00000493348 DENND4BO75064 1496 aaPredicted RBP12.59□□□□□ -0.39
TM4SF1-204ENST00000493348 NCOA2Q15596 1464 aa12.59□□□□□ -0.39
TM4SF1-204ENST00000493348 KANK4Q5T7N3 995 aaPredicted RBP12.58□□□□□ -0.4
TM4SF1-204ENST00000493348 SCAPERQ9BY12 1400 aa12.58□□□□□ -0.4
TM4SF1-204ENST00000493348 GPATCH8Q9UKJ3 1502 aaKnown RBP12.57□□□□□ -0.4
TM4SF1-204ENST00000493348 RAPGEF3O95398 923 aa12.57□□□□□ -0.4
TM4SF1-204ENST00000493348 PLEKHH2Q8IVE3 1493 aa12.57□□□□□ -0.4
TM4SF1-204ENST00000493348 RICTORQ6R327 1708 aa12.54□□□□□ -0.4
TM4SF1-204ENST00000493348 ZNF518AQ6AHZ1 1483 aa12.54□□□□□ -0.4
TM4SF1-204ENST00000493348 COL17A1Q9UMD9 1497 aaPredicted RBP12.54□□□□□ -0.4
TM4SF1-204ENST00000493348 POGZQ7Z3K3 1410 aa12.53□□□□□ -0.4
TM4SF1-204ENST00000493348 ABCC1P33527 1531 aa12.52□□□□□ -0.4
TM4SF1-204ENST00000493348 SAMD9LQ8IVG5 1584 aa12.52□□□□□ -0.4
TM4SF1-204ENST00000493348 MYOM3Q5VTT5 1437 aa12.52□□□□□ -0.41
TM4SF1-204ENST00000493348 SYCP2Q9BX26 1530 aa12.52□□□□□ -0.41
TM4SF1-204ENST00000493348 HNRNPMP52272 730 aaKnown RBP eCLIP12.5□□□□□ -0.41
TM4SF1-204ENST00000493348 MIA2Q96PC5 1412 aa12.5□□□□□ -0.41
TM4SF1-204ENST00000493348 FRMPD1Q5SYB0 1578 aa12.49□□□□□ -0.41
TM4SF1-204ENST00000493348 ZFYVE16Q7Z3T8 1539 aa12.49□□□□□ -0.41
TM4SF1-204ENST00000493348 CAMSAP2Q08AD1 1489 aa12.49□□□□□ -0.41
TM4SF1-204ENST00000493348 MAGI2Q86UL8 1455 aa12.49□□□□□ -0.41
TM4SF1-204ENST00000493348 KIAA1107Q9UPP5 1409 aa12.49□□□□□ -0.41
TM4SF1-204ENST00000493348 ARID4BQ4LE39 1312 aaPredicted RBP12.49□□□□□ -0.41
TM4SF1-204ENST00000493348 RSPH4AQ5TD94 716 aa12.49□□□□□ -0.41
TM4SF1-204ENST00000493348 PPARGC1BQ86YN6 1023 aaKnown RBP12.49□□□□□ -0.41
TM4SF1-204ENST00000493348 HECW2Q9P2P5 1572 aa12.48□□□□□ -0.41
TM4SF1-204ENST00000493348 ZMYM4Q5VZL5 1548 aa12.48□□□□□ -0.41
TM4SF1-204ENST00000493348 SPAG9O60271 1321 aaKnown RBP12.48□□□□□ -0.41
TM4SF1-204ENST00000493348 TSPY4P0CV99 314 aa12.48□□□□□ -0.41
TM4SF1-204ENST00000493348 TSPY10P0CW01 314 aa12.48□□□□□ -0.41
TM4SF1-204ENST00000493348 AFAP1Q8N556 730 aa12.48□□□□□ -0.41
TM4SF1-204ENST00000493348 PTPN23Q9H3S7 1636 aa12.47□□□□□ -0.41
TM4SF1-204ENST00000493348 ARHGEF40Q8TER5 1519 aa12.47□□□□□ -0.41
TM4SF1-204ENST00000493348 ZNF644Q9H582 1327 aaPredicted RBP12.46□□□□□ -0.41
TM4SF1-204ENST00000493348 TRAPPC8Q9Y2L5 1435 aa12.45□□□□□ -0.42
TM4SF1-204ENST00000493348 KDM5CP41229 1560 aa12.45□□□□□ -0.42
TM4SF1-204ENST00000493348 FAM50AQ14320 339 aaKnown RBP12.45□□□□□ -0.42
TM4SF1-204ENST00000493348 CCDC141Q6ZP82 1450 aa12.45□□□□□ -0.42
TM4SF1-204ENST00000493348 FGD6Q6ZV73 1430 aa12.45□□□□□ -0.42
TM4SF1-204ENST00000493348 ARHGEF12Q9NZN5 1544 aa12.44□□□□□ -0.42
TM4SF1-204ENST00000493348 MLH3Q9UHC1 1453 aa12.43□□□□□ -0.42
TM4SF1-204ENST00000493348 ARHGEF5Q12774 1597 aa12.43□□□□□ -0.42
TM4SF1-204ENST00000493348 ATP7AQ04656 1500 aa12.42□□□□□ -0.42
TM4SF1-204ENST00000493348 ATP10AO60312 1499 aa12.42□□□□□ -0.42
TM4SF1-204ENST00000493348 C9orf84Q5VXU9 1444 aa12.42□□□□□ -0.42
TM4SF1-204ENST00000493348 KIDINS220Q9ULH0 1771 aa12.41□□□□□ -0.42
TM4SF1-204ENST00000493348 YEATS2Q9ULM3 1422 aa12.4□□□□□ -0.42
TM4SF1-204ENST00000493348 ADGBQ8N7X0 1667 aa12.4□□□□□ -0.42
TM4SF1-204ENST00000493348 MBD5Q9P267 1494 aa12.4□□□□□ -0.43
TM4SF1-204ENST00000493348 DIP2CQ9Y2E4 1556 aa12.39□□□□□ -0.43
TM4SF1-204ENST00000493348 ESF1Q9H501 851 aaKnown RBP12.39□□□□□ -0.43
TM4SF1-204ENST00000493348 ABCA6Q8N139 1617 aa12.39□□□□□ -0.43
TM4SF1-204ENST00000493348 INO80Q9ULG1 1556 aaPredicted RBP12.39□□□□□ -0.43
TM4SF1-204ENST00000493348 RTEL1-TNFRSF6BF6WH68 1400 aa12.38□□□□□ -0.43
TM4SF1-204ENST00000493348 TCOF1Q13428 1488 aaKnown RBP12.38□□□□□ -0.43
TM4SF1-204ENST00000493348 CROCC2H7BZ55 1655 aa12.38□□□□□ -0.43
TM4SF1-204ENST00000493348 DNMT1P26358 1616 aaKnown RBP12.37□□□□□ -0.43
TM4SF1-204ENST00000493348 MLECQ14165 292 aa12.37□□□□□ -0.43
TM4SF1-204ENST00000493348 DAPK1P53355 1430 aa12.36□□□□□ -0.43
TM4SF1-204ENST00000493348 MAST1Q9Y2H9 1570 aa12.35□□□□□ -0.43
TM4SF1-204ENST00000493348 BCORL1Q5H9F3 1711 aa12.35□□□□□ -0.43
TM4SF1-204ENST00000493348 ITGAEP38570 1179 aa12.35□□□□□ -0.43
TM4SF1-204ENST00000493348 REREQ9P2R6 1566 aa12.35□□□□□ -0.43
TM4SF1-204ENST00000493348 A2MP01023 1474 aa12.34□□□□□ -0.43
TM4SF1-204ENST00000493348 SHANK2Q9UPX8 1470 aa12.34□□□□□ -0.43
TM4SF1-204ENST00000493348 CHIC2Q9UKJ5 165 aa12.34□□□□□ -0.43
TM4SF1-204ENST00000493348 ANKRD30AQ9BXX3 1397 aa12.33□□□□□ -0.44
TM4SF1-204ENST00000493348 FER1L4A9Z1Z3 1794 aa12.33□□□□□ -0.44
TM4SF1-204ENST00000493348 PLXNC1O60486 1568 aa12.32□□□□□ -0.44
TM4SF1-204ENST00000493348 ABCC5O15440 1437 aa12.32□□□□□ -0.44
TM4SF1-204ENST00000493348 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.31□□□□□ -0.44
TM4SF1-204ENST00000493348 AGLP35573 1532 aa12.31□□□□□ -0.44
TM4SF1-204ENST00000493348 DHX29Q7Z478 1369 aaKnown RBP12.3□□□□□ -0.44
TM4SF1-204ENST00000493348 GGT6Q6P531 493 aa12.3□□□□□ -0.44
TM4SF1-204ENST00000493348 RRP7BPQ9NSQ0 103 aa12.3□□□□□ -0.44
TM4SF1-204ENST00000493348 DUOX2Q9NRD8 1548 aa12.3□□□□□ -0.44
TM4SF1-204ENST00000493348 KIF15Q9NS87 1388 aa12.3□□□□□ -0.44
TM4SF1-204ENST00000493348 RRBP1Q9P2E9 1410 aaKnown RBP12.29□□□□□ -0.44
TM4SF1-204ENST00000493348 RIMS1Q86UR5 1692 aaKnown RBP12.29□□□□□ -0.44
TM4SF1-204ENST00000493348 KDM4FA0A1W2PPD8 638 aa12.29□□□□□ -0.44
TM4SF1-204ENST00000493348 KIF3BO15066 747 aa12.29□□□□□ -0.44
TM4SF1-204ENST00000493348 MADDQ8WXG6 1647 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms