RNA–Protein interactions for RNA: ENST00000493212.1

PHTF1-212, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 4

Gene PHTF1, Length 956 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-212ENST00000493212 KIF14Q15058 1648 aa34.15■■■■□ 3.06
PHTF1-212ENST00000493212 LRRIQ1Q96JM4 1722 aa34.14■■■■□ 3.06
PHTF1-212ENST00000493212 MYO5CQ9NQX4 1742 aa34.14■■■■□ 3.06
PHTF1-212ENST00000493212 CDK11AQ9UQ88 783 aaPredicted RBP34.14■■■■□ 3.06
PHTF1-212ENST00000493212 TROQ12816 1431 aaPredicted RBP34.13■■■■□ 3.05
PHTF1-212ENST00000493212 RIMS1Q86UR5 1692 aaKnown RBP34.09■■■■□ 3.05
PHTF1-212ENST00000493212 EFCAB2Q5VUJ9 269 aa34.08■■■■□ 3.05
PHTF1-212ENST00000493212 PCF11O94913 1555 aaKnown RBP34.05■■■■□ 3.04
PHTF1-212ENST00000493212 LMTK3Q96Q04 1460 aa34.04■■■■□ 3.04
PHTF1-212ENST00000493212 CLIP1P30622 1438 aa34.02■■■■□ 3.04
PHTF1-212ENST00000493212 CASKIN1Q8WXD9 1431 aa34.01■■■■□ 3.03
PHTF1-212ENST00000493212 ATP10AO60312 1499 aa33.98■■■■□ 3.03
PHTF1-212ENST00000493212 ARHGAP5Q13017 1502 aa33.98■■■■□ 3.03
PHTF1-212ENST00000493212 ZNF518AQ6AHZ1 1483 aa33.96■■■■□ 3.03
PHTF1-212ENST00000493212 KDM5CP41229 1560 aa33.96■■■■□ 3.03
PHTF1-212ENST00000493212 CCDC18Q5T9S5 1454 aa33.95■■■■□ 3.03
PHTF1-212ENST00000493212 C9orf84Q5VXU9 1444 aa33.95■■■■□ 3.02
PHTF1-212ENST00000493212 CDC42BPBQ9Y5S2 1711 aa33.93■■■■□ 3.02
PHTF1-212ENST00000493212 ARHGEF12Q9NZN5 1544 aa33.91■■■■□ 3.02
PHTF1-212ENST00000493212 FER1L4A9Z1Z3 1794 aa33.9■■■■□ 3.02
PHTF1-212ENST00000493212 PREX2Q70Z35 1606 aa33.89■■■■□ 3.02
PHTF1-212ENST00000493212 MLECQ14165 292 aa33.88■■■■□ 3.01
PHTF1-212ENST00000493212 AFAP1Q8N556 730 aa33.88■■■■□ 3.01
PHTF1-212ENST00000493212 FYCO1Q9BQS8 1478 aa33.87■■■■□ 3.01
PHTF1-212ENST00000493212 DIP2CQ9Y2E4 1556 aa33.82■■■■□ 3
PHTF1-212ENST00000493212 ABCC1P33527 1531 aa33.82■■■■□ 3
PHTF1-212ENST00000493212 MLH3Q9UHC1 1453 aa33.81■■■■□ 3
PHTF1-212ENST00000493212 REREQ9P2R6 1566 aa33.81■■■■□ 3
PHTF1-212ENST00000493212 TRAPPC8Q9Y2L5 1435 aa33.78■■■■□ 3
PHTF1-212ENST00000493212 CDC42BPAQ5VT25 1732 aa33.77■■■■□ 3
PHTF1-212ENST00000493212 PLPPR3Q6T4P5 718 aa33.77■■■■□ 3
PHTF1-212ENST00000493212 ABCA6Q8N139 1617 aa33.76■■■■□ 3
PHTF1-212ENST00000493212 HSPA2P54652 639 aa33.76■■■□□ 2.99
PHTF1-212ENST00000493212 ITSN2Q9NZM3 1697 aa33.76■■■□□ 2.99
PHTF1-212ENST00000493212 FBXO41Q8TF61 875 aa33.72■■■□□ 2.99
PHTF1-212ENST00000493212 AGLP35573 1532 aa33.69■■■□□ 2.98
PHTF1-212ENST00000493212 GPATCH8Q9UKJ3 1502 aaKnown RBP33.66■■■□□ 2.98
PHTF1-212ENST00000493212 KIDINS220Q9ULH0 1771 aa33.66■■■□□ 2.98
PHTF1-212ENST00000493212 PREX1Q8TCU6 1659 aa33.65■■■□□ 2.98
PHTF1-212ENST00000493212 MYT1LQ9UL68 1186 aa33.65■■■□□ 2.98
PHTF1-212ENST00000493212 SAMD9LQ8IVG5 1584 aa33.64■■■□□ 2.98
PHTF1-212ENST00000493212 CEBPAP49715 358 aaPredicted RBP33.64■■■□□ 2.98
PHTF1-212ENST00000493212 SYCP2Q9BX26 1530 aa33.57■■■□□ 2.96
PHTF1-212ENST00000493212 C3P01024 1663 aa33.53■■■□□ 2.96
PHTF1-212ENST00000493212 ZNF777Q9ULD5 760 aaPredicted RBP33.53■■■□□ 2.96
PHTF1-212ENST00000493212 KIAA1107Q9UPP5 1409 aa33.53■■■□□ 2.96
PHTF1-212ENST00000493212 SETD1BQ9UPS6 1966 aaKnown RBP33.51■■■□□ 2.96
PHTF1-212ENST00000493212 UHRF1BP1Q6BDS2 1440 aa33.5■■■□□ 2.95
PHTF1-212ENST00000493212 HNRNPMP52272 730 aaKnown RBP eCLIP33.48■■■□□ 2.95
PHTF1-212ENST00000493212 PLEKHH2Q8IVE3 1493 aa33.48■■■□□ 2.95
PHTF1-212ENST00000493212 MTUS2Q5JR59 1369 aa33.47■■■□□ 2.95
PHTF1-212ENST00000493212 CCNB3Q8WWL7 1395 aa33.47■■■□□ 2.95
PHTF1-212ENST00000493212 CFDP1Q9UEE9 299 aaPredicted RBP33.47■■■□□ 2.95
PHTF1-212ENST00000493212 SPAG9O60271 1321 aaKnown RBP33.46■■■□□ 2.95
PHTF1-212ENST00000493212 STRCQ7RTU9 1775 aa33.45■■■□□ 2.95
PHTF1-212ENST00000493212 INO80Q9ULG1 1556 aaPredicted RBP33.45■■■□□ 2.95
PHTF1-212ENST00000493212 CNTLNQ9NXG0 1405 aa33.45■■■□□ 2.94
PHTF1-212ENST00000493212 ATP7AQ04656 1500 aa33.44■■■□□ 2.94
PHTF1-212ENST00000493212 TIAM1Q13009 1591 aa33.42■■■□□ 2.94
PHTF1-212ENST00000493212 CEP162Q5TB80 1403 aa33.41■■■□□ 2.94
PHTF1-212ENST00000493212 EHBP1L1Q8N3D4 1523 aa33.41■■■□□ 2.94
PHTF1-212ENST00000493212 PLXNC1O60486 1568 aa33.41■■■□□ 2.94
PHTF1-212ENST00000493212 ESF1Q9H501 851 aaKnown RBP33.4■■■□□ 2.94
PHTF1-212ENST00000493212 CERKQ8TCT0 537 aa33.38■■■□□ 2.93
PHTF1-212ENST00000493212 MROH2AA6NES4 1674 aa33.37■■■□□ 2.93
PHTF1-212ENST00000493212 SUPT6HQ7KZ85 1726 aaKnown RBP33.36■■■□□ 2.93
PHTF1-212ENST00000493212 A2MP01023 1474 aa33.34■■■□□ 2.93
PHTF1-212ENST00000493212 MBD5Q9P267 1494 aa33.33■■■□□ 2.93
PHTF1-212ENST00000493212 ZNF644Q9H582 1327 aaPredicted RBP33.32■■■□□ 2.93
PHTF1-212ENST00000493212 DMRT2Q9Y5R5 561 aa33.32■■■□□ 2.92
PHTF1-212ENST00000493212 NPATQ14207 1427 aa33.31■■■□□ 2.92
PHTF1-212ENST00000493212 ZMYM3Q14202 1370 aa33.29■■■□□ 2.92
PHTF1-212ENST00000493212 PTPRTO14522 1441 aa33.27■■■□□ 2.92
PHTF1-212ENST00000493212 ADGBQ8N7X0 1667 aa33.26■■■□□ 2.91
PHTF1-212ENST00000493212 CLTCQ00610 1675 aaKnown RBP33.23■■■□□ 2.91
PHTF1-212ENST00000493212 RTEL1-TNFRSF6BF6WH68 1400 aa33.23■■■□□ 2.91
PHTF1-212ENST00000493212 NCOA1Q15788 1441 aa33.22■■■□□ 2.91
PHTF1-212ENST00000493212 NCOA2Q15596 1464 aa33.2■■■□□ 2.91
PHTF1-212ENST00000493212 PTPRKQ15262 1439 aa33.17■■■□□ 2.9
PHTF1-212ENST00000493212 PPP6R1Q9UPN7 881 aa33.16■■■□□ 2.9
PHTF1-212ENST00000493212 GGT6Q6P531 493 aa33.15■■■□□ 2.9
PHTF1-212ENST00000493212 CAMSAP1Q5T5Y3 1602 aa33.13■■■□□ 2.89
PHTF1-212ENST00000493212 CAMSAP2Q08AD1 1489 aa33.13■■■□□ 2.89
PHTF1-212ENST00000493212 DHX29Q7Z478 1369 aaKnown RBP33.13■■■□□ 2.89
PHTF1-212ENST00000493212 ZNF142P52746 1687 aaPredicted RBP33.13■■■□□ 2.89
PHTF1-212ENST00000493212 CCDC141Q6ZP82 1450 aa33.12■■■□□ 2.89
PHTF1-212ENST00000493212 MYO3AQ8NEV4 1616 aa33.12■■■□□ 2.89
PHTF1-212ENST00000493212 LTBP4Q8N2S1 1624 aa33.1■■■□□ 2.89
PHTF1-212ENST00000493212 VPS8Q8N3P4 1428 aa33.08■■■□□ 2.89
PHTF1-212ENST00000493212 RSPH4AQ5TD94 716 aa33.06■■■□□ 2.88
PHTF1-212ENST00000493212 CEP170BQ9Y4F5 1589 aaPredicted RBP33.05■■■□□ 2.88
PHTF1-212ENST00000493212 ARHGEF5Q12774 1597 aa33.04■■■□□ 2.88
PHTF1-212ENST00000493212 PLA2R1Q13018 1463 aa33.04■■■□□ 2.88
PHTF1-212ENST00000493212 LRRC9Q6ZRR7 1453 aa33.04■■■□□ 2.88
PHTF1-212ENST00000493212 LOC105371045A0A1W2PR82 267 aa33.02■■■□□ 2.88
PHTF1-212ENST00000493212 FAM135AQ9P2D6 1515 aa33■■■□□ 2.87
PHTF1-212ENST00000493212 TCOF1Q13428 1488 aaKnown RBP32.99■■■□□ 2.87
PHTF1-212ENST00000493212 NCKAP5LQ9HCH0 1330 aa32.98■■■□□ 2.87
PHTF1-212ENST00000493212 KIF3BO15066 747 aa32.97■■■□□ 2.87
PHTF1-212ENST00000493212 IQSEC2Q5JU85 1478 aa32.97■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms