RNA–Protein interactions for RNA: ENST00000493191.1

HMG20B-214, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 852 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-214ENST00000493191 SIGLEC1Q9BZZ2 1709 aa37.14■■■■□ 3.54
HMG20B-214ENST00000493191 POGZQ7Z3K3 1410 aa37.14■■■■□ 3.54
HMG20B-214ENST00000493191 PLPPR3Q6T4P5 718 aa37.13■■■■□ 3.53
HMG20B-214ENST00000493191 PCF11O94913 1555 aaKnown RBP37.12■■■■□ 3.53
HMG20B-214ENST00000493191 EFCAB2Q5VUJ9 269 aa37.11■■■■□ 3.53
HMG20B-214ENST00000493191 MYO5CQ9NQX4 1742 aa37.1■■■■□ 3.53
HMG20B-214ENST00000493191 LMTK3Q96Q04 1460 aa37.09■■■■□ 3.53
HMG20B-214ENST00000493191 MLECQ14165 292 aa37.09■■■■□ 3.53
HMG20B-214ENST00000493191 KIF14Q15058 1648 aa37.09■■■■□ 3.53
HMG20B-214ENST00000493191 TROQ12816 1431 aaPredicted RBP37.04■■■■□ 3.52
HMG20B-214ENST00000493191 LRRIQ1Q96JM4 1722 aa37■■■■□ 3.51
HMG20B-214ENST00000493191 CLIP1P30622 1438 aa36.98■■■■□ 3.51
HMG20B-214ENST00000493191 ATP10AO60312 1499 aa36.98■■■■□ 3.51
HMG20B-214ENST00000493191 ARHGAP5Q13017 1502 aa36.97■■■■□ 3.51
HMG20B-214ENST00000493191 HSPA2P54652 639 aa36.97■■■■□ 3.51
HMG20B-214ENST00000493191 FBXO41Q8TF61 875 aa36.95■■■■□ 3.51
HMG20B-214ENST00000493191 FER1L4A9Z1Z3 1794 aa36.95■■■■□ 3.51
HMG20B-214ENST00000493191 C9orf84Q5VXU9 1444 aa36.93■■■■□ 3.5
HMG20B-214ENST00000493191 AFAP1Q8N556 730 aa36.93■■■■□ 3.5
HMG20B-214ENST00000493191 ZNF518AQ6AHZ1 1483 aa36.91■■■■□ 3.5
HMG20B-214ENST00000493191 MYT1LQ9UL68 1186 aa36.87■■■■□ 3.49
HMG20B-214ENST00000493191 CASKIN1Q8WXD9 1431 aa36.85■■■■□ 3.49
HMG20B-214ENST00000493191 ARHGEF12Q9NZN5 1544 aa36.85■■■■□ 3.49
HMG20B-214ENST00000493191 CDC42BPBQ9Y5S2 1711 aa36.85■■■■□ 3.49
HMG20B-214ENST00000493191 KDM5CP41229 1560 aa36.83■■■■□ 3.49
HMG20B-214ENST00000493191 CCDC18Q5T9S5 1454 aa36.81■■■■□ 3.48
HMG20B-214ENST00000493191 CEBPAP49715 358 aaPredicted RBP36.79■■■■□ 3.48
HMG20B-214ENST00000493191 PREX2Q70Z35 1606 aa36.75■■■■□ 3.47
HMG20B-214ENST00000493191 DIP2CQ9Y2E4 1556 aa36.74■■■■□ 3.47
HMG20B-214ENST00000493191 TRAPPC8Q9Y2L5 1435 aa36.72■■■■□ 3.47
HMG20B-214ENST00000493191 MLH3Q9UHC1 1453 aa36.7■■■■□ 3.47
HMG20B-214ENST00000493191 ABCC1P33527 1531 aa36.69■■■■□ 3.46
HMG20B-214ENST00000493191 ABCA6Q8N139 1617 aa36.69■■■■□ 3.46
HMG20B-214ENST00000493191 FYCO1Q9BQS8 1478 aa36.68■■■■□ 3.46
HMG20B-214ENST00000493191 ITSN2Q9NZM3 1697 aa36.66■■■■□ 3.46
HMG20B-214ENST00000493191 CDC42BPAQ5VT25 1732 aa36.65■■■■□ 3.46
HMG20B-214ENST00000493191 PREX1Q8TCU6 1659 aa36.65■■■■□ 3.46
HMG20B-214ENST00000493191 REREQ9P2R6 1566 aa36.65■■■■□ 3.46
HMG20B-214ENST00000493191 ZNF777Q9ULD5 760 aaPredicted RBP36.62■■■■□ 3.45
HMG20B-214ENST00000493191 SETD1BQ9UPS6 1966 aaKnown RBP36.58■■■■□ 3.45
HMG20B-214ENST00000493191 KIDINS220Q9ULH0 1771 aa36.56■■■■□ 3.44
HMG20B-214ENST00000493191 AGLP35573 1532 aa36.55■■■■□ 3.44
HMG20B-214ENST00000493191 ESF1Q9H501 851 aaKnown RBP36.55■■■■□ 3.44
HMG20B-214ENST00000493191 CERKQ8TCT0 537 aa36.54■■■■□ 3.44
HMG20B-214ENST00000493191 UHRF1BP1Q6BDS2 1440 aa36.52■■■■□ 3.44
HMG20B-214ENST00000493191 GPATCH8Q9UKJ3 1502 aaKnown RBP36.52■■■■□ 3.44
HMG20B-214ENST00000493191 SAMD9LQ8IVG5 1584 aa36.51■■■■□ 3.44
HMG20B-214ENST00000493191 C3P01024 1663 aa36.5■■■■□ 3.43
HMG20B-214ENST00000493191 HNRNPMP52272 730 aaKnown RBP eCLIP36.49■■■■□ 3.43
HMG20B-214ENST00000493191 SYCP2Q9BX26 1530 aa36.48■■■■□ 3.43
HMG20B-214ENST00000493191 STRCQ7RTU9 1775 aa36.46■■■■□ 3.43
HMG20B-214ENST00000493191 SPAG9O60271 1321 aaKnown RBP36.44■■■■□ 3.42
HMG20B-214ENST00000493191 CFDP1Q9UEE9 299 aaPredicted RBP36.43■■■■□ 3.42
HMG20B-214ENST00000493191 DMRT2Q9Y5R5 561 aa36.43■■■■□ 3.42
HMG20B-214ENST00000493191 CCNB3Q8WWL7 1395 aa36.4■■■■□ 3.42
HMG20B-214ENST00000493191 MTUS2Q5JR59 1369 aa36.39■■■■□ 3.42
HMG20B-214ENST00000493191 CNTLNQ9NXG0 1405 aa36.38■■■■□ 3.41
HMG20B-214ENST00000493191 KIAA1107Q9UPP5 1409 aa36.36■■■■□ 3.41
HMG20B-214ENST00000493191 SUPT6HQ7KZ85 1726 aaKnown RBP36.34■■■■□ 3.41
HMG20B-214ENST00000493191 PLEKHH2Q8IVE3 1493 aa36.33■■■■□ 3.41
HMG20B-214ENST00000493191 ATP7AQ04656 1500 aa36.33■■■■□ 3.41
HMG20B-214ENST00000493191 INO80Q9ULG1 1556 aaPredicted RBP36.27■■■■□ 3.4
HMG20B-214ENST00000493191 ZMYM3Q14202 1370 aa36.27■■■■□ 3.4
HMG20B-214ENST00000493191 ZNF644Q9H582 1327 aaPredicted RBP36.26■■■■□ 3.39
HMG20B-214ENST00000493191 MROH2AA6NES4 1674 aa36.25■■■■□ 3.39
HMG20B-214ENST00000493191 A2MP01023 1474 aa36.24■■■■□ 3.39
HMG20B-214ENST00000493191 PTPRTO14522 1441 aa36.24■■■■□ 3.39
HMG20B-214ENST00000493191 NPATQ14207 1427 aa36.22■■■■□ 3.39
HMG20B-214ENST00000493191 PLXNC1O60486 1568 aa36.21■■■■□ 3.39
HMG20B-214ENST00000493191 TIAM1Q13009 1591 aa36.21■■■■□ 3.39
HMG20B-214ENST00000493191 GGT6Q6P531 493 aa36.2■■■■□ 3.39
HMG20B-214ENST00000493191 EHBP1L1Q8N3D4 1523 aa36.19■■■■□ 3.38
HMG20B-214ENST00000493191 CLTCQ00610 1675 aaKnown RBP36.19■■■■□ 3.38
HMG20B-214ENST00000493191 NCOA1Q15788 1441 aa36.18■■■■□ 3.38
HMG20B-214ENST00000493191 CEP162Q5TB80 1403 aa36.17■■■■□ 3.38
HMG20B-214ENST00000493191 MBD5Q9P267 1494 aa36.14■■■■□ 3.38
HMG20B-214ENST00000493191 CAMSAP1Q5T5Y3 1602 aa36.12■■■■□ 3.37
HMG20B-214ENST00000493191 ADGBQ8N7X0 1667 aa36.12■■■■□ 3.37
HMG20B-214ENST00000493191 PTPRKQ15262 1439 aa36.07■■■■□ 3.36
HMG20B-214ENST00000493191 PPP6R1Q9UPN7 881 aa36.06■■■■□ 3.36
HMG20B-214ENST00000493191 NCKAP5LQ9HCH0 1330 aa36.06■■■■□ 3.36
HMG20B-214ENST00000493191 LTBP4Q8N2S1 1624 aa36.05■■■■□ 3.36
HMG20B-214ENST00000493191 RTEL1-TNFRSF6BF6WH68 1400 aa36.04■■■■□ 3.36
HMG20B-214ENST00000493191 MYO3AQ8NEV4 1616 aa36.02■■■■□ 3.36
HMG20B-214ENST00000493191 NCOA2Q15596 1464 aa36.01■■■■□ 3.36
HMG20B-214ENST00000493191 DHX29Q7Z478 1369 aaKnown RBP36.01■■■■□ 3.35
HMG20B-214ENST00000493191 ZNF142P52746 1687 aaPredicted RBP35.98■■■■□ 3.35
HMG20B-214ENST00000493191 CEP170BQ9Y4F5 1589 aaPredicted RBP35.97■■■■□ 3.35
HMG20B-214ENST00000493191 CAMSAP2Q08AD1 1489 aa35.95■■■■□ 3.35
HMG20B-214ENST00000493191 CCDC141Q6ZP82 1450 aa35.95■■■■□ 3.35
HMG20B-214ENST00000493191 KIF3BO15066 747 aa35.94■■■■□ 3.34
HMG20B-214ENST00000493191 PKD2Q13563 968 aa35.93■■■■□ 3.34
HMG20B-214ENST00000493191 PLA2R1Q13018 1463 aa35.92■■■■□ 3.34
HMG20B-214ENST00000493191 RSPH4AQ5TD94 716 aa35.91■■■■□ 3.34
HMG20B-214ENST00000493191 ZNF335Q9H4Z2 1342 aaPredicted RBP35.9■■■■□ 3.34
HMG20B-214ENST00000493191 IQSEC2Q5JU85 1478 aa35.88■■■■□ 3.33
HMG20B-214ENST00000493191 TCOF1Q13428 1488 aaKnown RBP35.87■■■■□ 3.33
HMG20B-214ENST00000493191 LOC105371045A0A1W2PR82 267 aa35.86■■■■□ 3.33
HMG20B-214ENST00000493191 FBXO31Q5XUX0 539 aaPredicted RBP35.85■■■■□ 3.33
HMG20B-214ENST00000493191 A2ML1A8K2U0 1454 aa35.85■■■■□ 3.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms